Factsheet for Bra022979.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84641	Canola	cytosol	59.45	91.47
CDX79566	Canola	cytosol	58.58	89.89
Bra005414.1-P	Field mustard	cytosol	58.93	86.73
AT2G34560.2	Thale cress	cytosol	57.37	84.22
Solyc02g070440.2.1	Tomato	cytosol	47.66	71.24
PGSC0003DMT400054532	Potato	cytosol	47.66	70.88
VIT_10s0003g03500.t01	Wine grape	cytosol	48.01	69.77
GSMUA_Achr10P...	Banana	cytosol	46.79	69.77
TraesCS3A01G294400.1	Wheat	cytosol	45.41	69.31
EES01499	Sorghum	cytosol	45.75	69.29
KRH58481	Soybean	cytosol	48.35	69.23
Os01t0757400-02	Rice	cytosol	46.1	68.91
KRH42362	Soybean	cytosol, endoplasmic reticulum	48.35	68.89
HORVU3Hr1G072910.6	Barley	cytosol	44.89	68.88
TraesCS3B01G305600.2	Wheat	cytosol	46.79	68.35
TraesCS3A01G271900.1	Wheat	cytosol	46.79	67.5
TraesCS3B01G329000.2	Wheat	cytosol	45.23	67.44
TraesCS3D01G271500.1	Wheat	cytosol	46.62	67.25
Os01t0673500-01	Rice	cytosol	47.66	67.07
GSMUA_Achr7P25300_001	Banana	cytosol	47.14	66.83
OQU87315	Sorghum	cytosol	46.62	66.75
Zm00001d043410_P002	Maize	cytosol	45.58	63.37
HORVU3Hr1G061800.1	Barley	cytosol, plastid	48.18	59.78
TraesCS3D01G294200.1	Wheat	plastid	45.58	59.37
Zm00001d011563_P019	Maize	mitochondrion	48.01	52.76
Bra004917.1-P	Field mustard	cytosol	18.37	33.23
Bra018640.1-P	Field mustard	cytosol	24.26	32.56
Bra000503.1-P	Field mustard	cytosol	24.09	32.1
Bra012009.1-P	Field mustard	cytosol	23.92	31.87
Bra008479.1-P	Field mustard	cytosol	27.21	29.73
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	20.1	29.59
Bra026316.1-P	Field mustard	endoplasmic reticulum	19.76	29.08
Bra003561.1-P	Field mustard	cytosol	26.34	28.63
Bra003048.1-P	Field mustard	endoplasmic reticulum	19.58	28.46
Bra029063.1-P	Field mustard	endoplasmic reticulum	18.54	27.37
Bra039332.1-P	Field mustard	cytosol	19.93	26.32
Bra032982.1-P	Field mustard	plastid	25.82	22.99
Bra027756.1-P	Field mustard	endoplasmic reticulum	23.4	16.25
Bra003102.1-P	Field mustard	extracellular, plasma membrane	23.05	16.18
Bra029104.1-P	Field mustard	extracellular, plasma membrane	22.88	16.04
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	22.53	15.83
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	22.7	15.8
Bra014239.1-P	Field mustard	mitochondrion	23.57	13.61
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	22.01	12.8
Bra032579.1-P	Field mustard	plastid	22.88	11.51
Bra018548.1-P	Field mustard	plastid	23.74	11.24
Bra000878.1-P	Field mustard	plastid	23.4	10.78
Bra036265.1-P	Field mustard	plastid	23.57	10.54
Bra033356.1-P	Field mustard	cytosol, plastid	23.74	9.19

Protein Annotations

Gene3D:1.10.8.60	MapMan:11.6.3.4	Gene3D:2.60.120.330	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra022979	EnsemblPlants:Bra022979.1	EnsemblPlants:Bra022979.1-P	InterPro:DIOX_N	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4E2H8	InterPro:Oxoglu/Fe-dep_dioxygenase
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR23074
PANTHER:PTHR23074:SF92	SMART:SM00382	SUPFAM:SSF51197	SUPFAM:SSF52540	UniParc:UPI000253FDAE	SEG:seg

Description

AT2G34560 (E=6e-182) | katanin, putative

Coordinates

chrA03:+:8061040..8069408

Molecular Weight (calculated)

64536.7 Da

IEP (calculated)

5.940

GRAVY (calculated)

-0.344

Length

577 amino acids

Sequence
(BLAST)

001: MVVSLKPKSV TLNNSQVHVN PKCKPSPVLI PVVNLTDPNA KTQIVKACEE LGFFKVVNHG VRPEFLTQLE EEAIKFFALP QFHKDKAGPA DPFGYGSKRI
101: GPNGDVGWIE YILLNANSDT KTTAVFLQTT PTFREVVEVF MEEMKDMSSK VLDMVAEELK IEPKDKLSKL VKVKESDSCL RMNHYPEKEE TRRKEEIGFG
201: EHTDPQLVSV LRSNNTEGLQ ICLKDGTWVD VPPDHSSFFV IVGDTLQEEG NTGLANGIRE KPKKSMFPPF ESAETRALAE SLSRDIIRGN PNVKWESIKG
301: LENAKRLLKE AVVMPIKYPS YFNGLLSPWK GILLFGPPGT GKTMLAKAVA TECNTTFFNI SASSVVSKWR GDSEKLIRVL FDLAKHHAPS TIFLDEIDAI
401: ISQRGGEGRS EHEASRRLKT ELLIQMDGLQ KTNELVFVLA ATNLPWELDA AMLRRLEKRI LVPLPDPEAR RGMFEMLLPS QPGDEPLPHD VLVEKSEGYS
501: GSDIRILCKE AAMQPLRRTL AVLEDTEDIV PEDELPKVGA ILPEDIDRAL SNTRPSAHLH AHLYDKFNDD YGSHILK

Best Arabidopsis Sequence Match ( AT2G34560.1 )
(BLAST)

001: MATDEPSQTR WSFLFGRKKL PEEDVSNKDQ PEDGSSNGNN GDVNNNSSPV TNQDGNTALA NGNVIREKPK KSMFPPFESA ETRTLAESLS RDIIRGNPNI
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.