Factsheet for Bra004917.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74745	Canola	cytosol	98.43	66.11
Bra039332.1-P	Field mustard	cytosol	87.15	63.62
AT2G45500.5	Thale cress	cytosol	87.77	56.34
VIT_15s0048g01720.t01	Wine grape	cytosol	75.86	49.29
KRH40573	Soybean	cytosol, plastid	73.98	48.56
KRH00594	Soybean	cytosol, plastid	73.98	48.07
Solyc01g094150.2.1	Tomato	nucleus	73.04	47.45
Os06t0130000-02	Rice	cytosol	70.85	46.41
TraesCS7D01G060200.1	Wheat	cytosol	69.28	46.33
TraesCS7A01G065800.1	Wheat	cytosol	69.59	46.25
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.59	46.25
EER87773	Sorghum	cytosol	70.22	45.71
Zm00001d045483_P002	Maize	cytosol	70.85	45.38
GSMUA_Achr10P...	Banana	cytosol	67.08	41.15
HORVU7Hr1G013190.8	Barley	plastid	69.91	39.89
Bra018640.1-P	Field mustard	cytosol	38.87	28.84
Bra000503.1-P	Field mustard	cytosol	38.87	28.64
Bra012009.1-P	Field mustard	cytosol	38.56	28.41
Bra005414.1-P	Field mustard	cytosol	33.86	27.55
Bra003048.1-P	Field mustard	endoplasmic reticulum	30.41	24.43
Bra029063.1-P	Field mustard	endoplasmic reticulum	29.47	24.04
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.21	22.96
Bra026316.1-P	Field mustard	endoplasmic reticulum	27.9	22.7
Bra003561.1-P	Field mustard	cytosol	37.62	22.6
Bra008479.1-P	Field mustard	cytosol	37.3	22.54
Bra032982.1-P	Field mustard	plastid	44.2	21.76
Bra022979.1-P	Field mustard	plastid	33.23	18.37
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	32.6	12.67
Bra029104.1-P	Field mustard	extracellular, plasma membrane	32.6	12.64
Bra027756.1-P	Field mustard	endoplasmic reticulum	32.92	12.64
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	32.29	12.42
Bra003102.1-P	Field mustard	extracellular, plasma membrane	31.97	12.41
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	35.11	11.29
Bra014239.1-P	Field mustard	mitochondrion	35.11	11.21
Bra018548.1-P	Field mustard	plastid	33.54	8.78
Bra032579.1-P	Field mustard	plastid	31.03	8.63
Bra036265.1-P	Field mustard	plastid	34.48	8.53
Bra000878.1-P	Field mustard	plastid	33.23	8.47
Bra033356.1-P	Field mustard	cytosol, plastid	34.48	7.38

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra004917
EnsemblPlants:Bra004917.1	EnsemblPlants:Bra004917.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
UniProt:M4CL31	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF86	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002547FE5	InterPro:Vps4_C	SEG:seg

Description

AT2G45500 (E=4e-125) | ATP binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA05:-:2474179..2477487

Molecular Weight (calculated)

35359.9 Da

IEP (calculated)

10.466

GRAVY (calculated)

-0.584

Length

319 amino acids

Sequence
(BLAST)

001: MSEATSTPSP SYISSNEKEK VRSYREKISK WQSQVSERLQ ALGKRAGDRT VPSPSSASVS SNRRVSTQRT SLPRGGVGKA RSPRDATTTN LKPAKESGNG
101: YDDKLEEMIN TTIVDRSPSV KWDDVAGLDG AKQALLEMVI LPAKRRDLFT GLRRPARGLL LFGPPGNGKT MLAKAVASES QATFFNVSAS SLTSKWVGEA
201: EKLVKTLFQV AISRQPSVIF MDEIDSIMST RSTNENEASR RLKSEFLIQF DGVTSNPDDL VIVIGATNKP QELDDAVLRR LVRPLRYDDF RKSMAVIRPS
301: LSKNKWEELE RWNSEFGSN

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.