CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
nucleus 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00594	Soybean	cytosol, plastid	95.88	94.91
VIT_15s0048g01720.t01	Wine grape	cytosol	74.9	74.13
CDY18925	Canola	plastid	55.14	74.03
Bra004917.1-P	Field mustard	cytosol	48.56	73.98
CDX74745	Canola	cytosol	71.6	73.26
AT2G45500.5	Thale cress	cytosol	72.43	70.83
Bra039332.1-P	Field mustard	cytosol	63.58	70.71
TraesCS7D01G060200.1	Wheat	cytosol	67.7	68.97
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.9	68.75
Solyc01g094150.2.1	Tomato	nucleus	69.34	68.64
TraesCS7A01G065800.1	Wheat	cytosol	67.28	68.12
Os06t0130000-02	Rice	cytosol	67.9	67.76
EER87773	Sorghum	cytosol	68.31	67.76
CDY37046	Canola	cytosol	70.99	67.51
Zm00001d045483_P002	Maize	cytosol	67.9	66.27
GSMUA_Achr10P...	Banana	cytosol	65.43	61.15
HORVU7Hr1G013190.8	Barley	plastid	67.08	58.32
CDY27380	Canola	nucleus	72.02	47.17
KRH23518	Soybean	cytosol	19.96	42.36
KRH08796	Soybean	cytosol	13.58	37.93
KRH58481	Soybean	cytosol	29.63	35.73
KRH42362	Soybean	cytosol, endoplasmic reticulum	29.63	35.56
KRH25197	Soybean	cytosol	30.45	34.1
KRH30451	Soybean	cytosol	30.45	34.1
KRH26619	Soybean	nucleus	30.25	33.72
KRH22691	Soybean	cytosol	26.95	32.03
KRH64362	Soybean	endoplasmic reticulum, plasma membrane	24.69	30.61
KRH53570	Soybean	endoplasmic reticulum, plasma membrane	24.69	30.61
KRH15897	Soybean	endoplasmic reticulum	24.28	30.26
KRH09800	Soybean	cytosol	29.22	29.71
KRH47511	Soybean	cytosol	29.63	27.12
KRH44395	Soybean	cytosol	29.42	26.83
KRG94255	Soybean	nucleus	35.8	26.4
KRH08789	Soybean	cytosol	18.11	26.27
KRH57680	Soybean	nucleus	35.6	26.25
KRH57222	Soybean	cytosol	26.75	20.73
KRH35220	Soybean	endoplasmic reticulum	29.22	17.55
KRH08780	Soybean	extracellular, plasma membrane	29.22	17.38
KRG91604	Soybean	endoplasmic reticulum, plasma membrane	29.22	17.32
KRH38312	Soybean	endoplasmic reticulum	29.01	17.26
KRH77598	Soybean	endoplasmic reticulum	29.01	16.81
KRH27876	Soybean	cytosol	28.4	16.45
KRH59989	Soybean	endoplasmic reticulum	28.19	16.31
KRH41256	Soybean	extracellular	28.6	16.3
KRH29161	Soybean	cytosol, mitochondrion	29.42	13.78
KRH24190	Soybean	mitochondrion	29.42	13.76
KRH71559	Soybean	cytosol	27.98	12.3
KRH54195	Soybean	plastid	29.63	11.63
KRH63756	Soybean	cytosol, plastid	29.42	11.59
KRH03951	Soybean	nucleus	29.01	11.52
KRH31896	Soybean	nucleus	27.98	11.09
KRH31895	Soybean	nucleus	28.4	11.07
KRH71560	Soybean	nucleus	28.19	11.02

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:50.3.6	InterPro:AAA+_ATPase	EMBL:ACUP02006044	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlantsGene:GLYMA_09G267500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787
GO:GO:0016887	UniProt:I1L6T2	EnsemblPlants:KRH40573	ProteinID:KRH40573	ProteinID:KRH40573.1	InterPro:MIT
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF86	SMART:SM00382
SMART:SM00745	SUPFAM:SSF52540	UniParc:UPI0002338D3D	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:48529310..48535341

Molecular Weight (calculated)

54276.8 Da

IEP (calculated)

10.002

GRAVY (calculated)

-0.462

Length

486 amino acids

Sequence
(BLAST)

001: MSFLQGIIDS FNSIFTHDNN NNYHNTNSPS SSSSTNRMEA SPPPSVSNER VAYKLKGYFD LATQEIAKGV RAEEWGLIDD ALLHYRNAHS ILLEANSTPV
101: PSYITTSEQQ KVQSYREKIS KWQSQVSERL QTLARRAGSS SANQSTSKLG QTAAAPIKTL STRKNVLQKP PQRGGQVNKV GSPKSSQASG VNYDDKLVEM
201: INTAIVDRSP SVRWEDVAGL EKAKQALMEM VILPTKRRDL FTGLRRPARG LLLFGPPGNG KTMLAKAVAS ESQATFFNVT AASLTSKWVG EAEKLVRTLF
301: MVAISRQPSV IFIDEIDSIM STRLANENDA SRRLKSEFLI QFDGVTSNPD DIVIVIGATN KPQELDDAVL RRLVKRIYVP LPDENVRKLL LKHKLKGQAF
401: SLPSRDLERL VKETERYSGS DLQALCEEAA MMPIRELGVD ILTVKANQVR GLRYEDFKKA MTIIRPSLNK SKWEELERWN EEFGSN

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.