CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57680	Soybean	nucleus	95.9	95.9
VIT_14s0068g02130.t01	Wine grape	nucleus	74.96	73.95
CDY28494	Canola	plastid	66.01	67.13
CDY34176	Canola	plastid	65.86	66.98
GSMUA_Achr6P27610_001	Banana	cytosol	66.46	66.87
Bra032982.1-P	Field mustard	plastid	65.71	66.82
PGSC0003DMT400052226	Potato	nucleus	66.46	65.57
Solyc02g094100.2.1	Tomato	nucleus	65.86	64.97
AT3G27120.1	Thale cress	nucleus	66.31	64.26
TraesCS5D01G123800.1	Wheat	nucleus	65.86	63.08
TraesCS5B01G110300.1	Wheat	nucleus	65.25	62.5
Zm00001d041083_P005	Maize	nucleus	64.19	62.39
TraesCS5A01G109500.1	Wheat	nucleus	64.64	61.92
KXG23422	Sorghum	nucleus	63.88	61.19
HORVU5Hr1G029910.10	Barley	cytosol, mitochondrion, nucleus	59.33	54.84
KRH08796	Soybean	cytosol	11.08	41.95
KRH23518	Soybean	cytosol	14.11	40.61
KRH58481	Soybean	cytosol	22.46	36.72
Os12t0443800-01	Rice	nucleus	21.24	36.65
KRH00594	Soybean	cytosol, plastid	26.86	36.05
KRH42362	Soybean	cytosol, endoplasmic reticulum	22.0	35.8
KRH40573	Soybean	cytosol, plastid	26.4	35.8
KRH26619	Soybean	nucleus	22.15	33.49
KRH30451	Soybean	cytosol	22.0	33.41
KRH25197	Soybean	cytosol	22.0	33.41
KRH08789	Soybean	cytosol	16.39	32.24
KRH09800	Soybean	cytosol	23.22	32.01
KRH22691	Soybean	cytosol	19.58	31.54
KRH44395	Soybean	cytosol	25.04	30.96
KRH47511	Soybean	cytosol	24.89	30.89
KRH53570	Soybean	endoplasmic reticulum, plasma membrane	18.21	30.61
KRH64362	Soybean	endoplasmic reticulum, plasma membrane	18.06	30.36
KRH15897	Soybean	endoplasmic reticulum	17.91	30.26
KRH57222	Soybean	cytosol	24.13	25.36
KRH38312	Soybean	endoplasmic reticulum	24.73	19.95
KRH08780	Soybean	extracellular, plasma membrane	24.58	19.83
KRH41256	Soybean	extracellular	25.34	19.58
KRH77598	Soybean	endoplasmic reticulum	24.89	19.55
KRH27876	Soybean	cytosol	24.89	19.55
KRH59989	Soybean	endoplasmic reticulum	24.28	19.05
KRH35220	Soybean	endoplasmic reticulum	22.46	18.29
KRG91604	Soybean	endoplasmic reticulum, plasma membrane	22.31	17.93
KRH29161	Soybean	cytosol, mitochondrion	24.73	15.7
KRH71559	Soybean	cytosol	26.1	15.55
KRH24190	Soybean	mitochondrion	24.43	15.5
KRH63756	Soybean	cytosol, plastid	27.16	14.51
KRH54195	Soybean	plastid	27.16	14.46
KRH71560	Soybean	nucleus	27.01	14.32
KRH31895	Soybean	nucleus	27.01	14.27
KRH31896	Soybean	nucleus	26.56	14.27
KRH03951	Soybean	nucleus	26.4	14.22

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100789161	MapMan:13.3.6.5.5.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	EMBL:ACUP02011913
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	EnsemblPlantsGene:GLYMA_19G071600	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010569	GO:GO:0016787	GO:GO:0016887	UniProt:K7MX18	EnsemblPlants:KRG94255
ProteinID:KRG94255	ProteinID:KRG94255.1	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336	ScanProsite:PS00674
PANTHER:PTHR23074	PANTHER:PTHR23074:SF17	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000233F167	InterPro:Vps4_C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:24604877..24611795

Molecular Weight (calculated)

73076.1 Da

IEP (calculated)

8.568

GRAVY (calculated)

-0.572

Length

659 amino acids

Sequence
(BLAST)

001: MEEAKEKCWR MEVEEKLKRL QSLLFGAERA LENNDFSSAY VLALRLLGFL DANSHSDVDE AFVQPIRRDA LAKLHFARQS LAPQSDRQAF EQAKKSPGRI
101: FGTTGDIDIE KIQNSKYFQA LVKQSKEKDE NQPVDHLGKQ DKAGSKASKQ MVQTKLPSMY GKSSLRTSNG PKSFLNMKNN SSEDCMILDR PQSHASHIKG
201: PGFSSILQVE GEERAFGSTF SAKRVHMENN CPRVGFVKSP SSKEDVNPDA CGNGFVTARA KLEMEAKQKR GVGGSPSASV SPQCDNNSAN RLYGGRSYGV
301: SRRGVRGNFV PPIKSNGNNA GNMSARVAGK CDDSLDDSTK KCLEILCGPD GELPEKLRNL EPRLIEHVSN EIMDRDPNVR WDDIAGLEHA KKCVNEMVVY
401: PLQRPDIFMG CRSPGRGLLL FGPPGTGKTM IGKAIAGEAK ATFFYISASS LTSKWIGEGE KLVRALFGVA SCRQPAVIFV DEIDSLLSQR KSDGEHESSR
501: RLKTQFLIEM EGFDSGSEQI LLIGATNRPQ ELDEAARRRL TKRLYIPLPC SEARAWITRN LLEKDGLFKL SSEEMDIICK LTEGYSGSDM KNLVKDASMG
601: PLREALGQGI EITKLKKEDM RPVTLQDFKN SLQEVRPSVS PNELVTYEQW NKQFGSLSL

Best Arabidopsis Sequence Match ( AT3G27120.1 )
(BLAST)

001: MCGSVVSDSE REFEFHFWGF GHLGKEEERI MAGKRSSPFS SPLLRPPPEF LNVKEEGETE TPCWRKEVDE NLKRLQSLLF GADKFLEKSD FSSAQILGLR
101: LLGFLDSRSV TDADRDFIGP IRREVASKID LALEGLVSDS DRKAFELANT APGAIFGSKG GFDVEKIKQS KYFGFHVSQS NGKGVKEMEE RHDTDKLIPK
201: APKSMMQAKL TSLYGNSIGK PDNQRKTSVN NQDRASDECV IVERSHGFGF GTKRPHAETS SLANDGEVKE DGAPNGFVSA KIKLEMDVRQ KRGSTESPSS
301: CLSPQSDKNA LGRGYGSRSG GLRRGYRSNF VPPVKTNGNN VGNLTSRIGG KTDDALDDST RTCLEMLCGP DGELPEKLRN LEPRLIEHVS NEIMDRDPNV
401: RWDDIAGLEH AKKCVTEMVI WPLLRPDIFK GCRSPGKGLL LFGPPGTGKT MIGKAIAGEA KATFFYISAS SLTSKWIGEG EKLVRALFGV ASCRQPAVIF
501: VDEIDSLLSQ RKSDGEHESS RRLKTQFLIE MEGFDSGSEQ ILLIGATNRP QELDEAARRR LTKRLYIPLP SSEARAWIIQ NLLKKDGLFT LSDDDMNIIC
601: NLTEGYSGSD MKNLVKDATM GPLREALKRG IDITNLTKDD MRLVTLQDFK DALQEVRPSV SQNELGIYEN WNNQFGSLSL

Arabidopsis Description

FIGL1ATPase family AAA domain-containing protein FIGL1 [Source:UniProtKB/Swiss-Prot;Acc:F4JEX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.