Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64362 | Soybean | endoplasmic reticulum, plasma membrane | 85.9 | 85.46 |
| KRH53570 | Soybean | endoplasmic reticulum, plasma membrane | 85.38 | 84.95 |
| PGSC0003DMT400013963 | Potato | endoplasmic reticulum | 81.03 | 80.61 |
| Solyc06g053160.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 80.77 | 80.36 |
| PGSC0003DMT400047633 | Potato | endoplasmic reticulum | 76.41 | 78.84 |
| AT4G27680.1 | Thale cress | endoplasmic reticulum, plasma membrane | 80.0 | 78.39 |
| Solyc03g082630.2.1 | Tomato | endoplasmic reticulum | 75.38 | 77.98 |
| Bra019030.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 78.21 | 77.81 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 77.95 | 77.55 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 77.69 | 77.49 |
| CDY19035 | Canola | endoplasmic reticulum | 77.69 | 77.3 |
| CDY55344 | Canola | endoplasmic reticulum | 77.69 | 77.3 |
| CDY30236 | Canola | endoplasmic reticulum | 77.69 | 77.3 |
| Bra026316.1-P | Field mustard | endoplasmic reticulum | 77.69 | 77.3 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 77.44 | 77.24 |
| GSMUA_Achr4P05220_001 | Banana | endoplasmic reticulum | 74.87 | 75.26 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 74.62 | 75.0 |
| TraesCS7D01G381400.1 | Wheat | endoplasmic reticulum | 70.0 | 73.39 |
| TraesCS7B01G287800.1 | Wheat | golgi | 70.0 | 73.19 |
| TraesCS7A01G384900.1 | Wheat | endoplasmic reticulum | 70.0 | 73.19 |
| KXG20883 | Sorghum | endoplasmic reticulum | 73.33 | 73.15 |
| Os06t0714500-01 | Rice | plasma membrane | 73.59 | 73.03 |
| Zm00001d014775_P002 | Maize | plastid | 73.08 | 72.89 |
| AT5G53540.1 | Thale cress | endoplasmic reticulum | 75.13 | 72.7 |
| CDY14372 | Canola | endoplasmic reticulum | 73.08 | 71.79 |
| Bra003048.1-P | Field mustard | endoplasmic reticulum | 72.56 | 71.28 |
| HORVU0Hr1G021880.1 | Barley | endoplasmic reticulum | 71.79 | 71.07 |
| CDY20251 | Canola | endoplasmic reticulum | 72.82 | 70.65 |
| CDY38752 | Canola | endoplasmic reticulum | 69.49 | 70.21 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 67.95 | 68.12 |
| Bra029063.1-P | Field mustard | endoplasmic reticulum | 67.69 | 67.52 |
| HORVU7Hr1G091480.2 | Barley | plastid | 70.51 | 63.66 |
| Zm00001d036410_P002 | Maize | plastid | 72.31 | 59.24 |
| KRH08796 | Soybean | cytosol | 22.05 | 49.43 |
| VIT_16s0098g01260.t01 | Wine grape | endoplasmic reticulum | 78.46 | 39.64 |
| KRH08789 | Soybean | cytosol | 29.74 | 34.63 |
| KRH23518 | Soybean | cytosol | 18.72 | 31.88 |
| KRH58481 | Soybean | cytosol | 29.74 | 28.78 |
| KRH42362 | Soybean | cytosol, endoplasmic reticulum | 29.49 | 28.4 |
| KRH26619 | Soybean | nucleus | 28.97 | 25.92 |
| KRH30451 | Soybean | cytosol | 28.72 | 25.81 |
| KRH25197 | Soybean | cytosol | 28.72 | 25.81 |
| KRH57222 | Soybean | cytosol | 40.77 | 25.36 |
| KRH00594 | Soybean | cytosol, plastid | 31.03 | 24.64 |
| KRH40573 | Soybean | cytosol, plastid | 30.26 | 24.28 |
| KRH22691 | Soybean | cytosol | 24.87 | 23.72 |
| KRH09800 | Soybean | cytosol | 25.9 | 21.13 |
| KRH38312 | Soybean | endoplasmic reticulum | 43.33 | 20.69 |
| KRH08780 | Soybean | extracellular, plasma membrane | 43.33 | 20.69 |
| KRH47511 | Soybean | cytosol | 27.18 | 19.96 |
| KRH44395 | Soybean | cytosol | 27.18 | 19.89 |
| KRH77598 | Soybean | endoplasmic reticulum | 42.56 | 19.79 |
| KRH35220 | Soybean | endoplasmic reticulum | 41.03 | 19.78 |
| KRG91604 | Soybean | endoplasmic reticulum, plasma membrane | 41.54 | 19.76 |
| KRH27876 | Soybean | cytosol | 42.05 | 19.55 |
| KRH59989 | Soybean | endoplasmic reticulum | 41.54 | 19.29 |
| KRH41256 | Soybean | extracellular | 42.05 | 19.23 |
| KRG94255 | Soybean | nucleus | 30.26 | 17.91 |
| KRH57680 | Soybean | nucleus | 29.74 | 17.6 |
| KRH29161 | Soybean | cytosol, mitochondrion | 40.0 | 15.03 |
| KRH24190 | Soybean | mitochondrion | 39.49 | 14.82 |
| KRH71559 | Soybean | cytosol | 41.79 | 14.74 |
| KRH03951 | Soybean | nucleus | 42.05 | 13.4 |
| KRH71560 | Soybean | nucleus | 42.31 | 13.27 |
| KRH31895 | Soybean | nucleus | 42.31 | 13.23 |
| KRH31896 | Soybean | nucleus | 41.54 | 13.21 |
| KRH54195 | Soybean | plastid | 41.79 | 13.17 |
| KRH63756 | Soybean | cytosol, plastid | 41.54 | 13.13 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:100791694 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | EMBL:ACUP02008716 |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlantsGene:GLYMA_14G117800 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | UniProt:I1MAC5 | EnsemblPlants:KRH15897 |
| ProteinID:KRH15897 | ProteinID:KRH15897.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PFscan:PS51257 |
| PANTHER:PTHR23074 | PANTHER:PTHR23074:SF20 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI000233AB4D |
Description
hypothetical protein
Coordinates
chr14:-:15548154..15561457
Molecular Weight (calculated)
43533.6 Da
IEP (calculated)
6.023
GRAVY (calculated)
-0.136
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLAESKLV QELVLYAASA ALSCLVLFVG LRQLDPNREA SKKAFQHKKE IAKRLGRPLV QTNPYEDVIA CDVINPDNID VEFNSIGGLE TIKLALFELV
101: ILPLKRPDLF SHGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RISNLMSKWF GDAQKLVTAI FSLAHKLQPA IIFIDEVDSF LGQRRTTDHE
201: ALLNMKTEFM ALWDGFTTDQ NAQVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDQRERAD ILKVILKGER VEENIDFDHI AYLCEGYTGS DLFDLCKKAA
301: YFPIRELLDE EKKGRSFSAP RPLSQLDLEK VLATSRKTTV AAFEYNGLSA DALRWSGQGE QDDYQVQAAI NELKFVVSHM INRQPDAKDL
101: ILPLKRPDLF SHGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RISNLMSKWF GDAQKLVTAI FSLAHKLQPA IIFIDEVDSF LGQRRTTDHE
201: ALLNMKTEFM ALWDGFTTDQ NAQVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDQRERAD ILKVILKGER VEENIDFDHI AYLCEGYTGS DLFDLCKKAA
301: YFPIRELLDE EKKGRSFSAP RPLSQLDLEK VLATSRKTTV AAFEYNGLSA DALRWSGQGE QDDYQVQAAI NELKFVVSHM INRQPDAKDL
001: MGGSSETKIL QELILYAASA AFSCLVLFAG LRHLDPNREA SKKALEHKKE ISKRLGRPLV QTNPYEDVIA CDVINPDHID VEFGSIGGLE TIKQALYELV
101: ILPLKRPELF AYGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA IIFIDEVESF LGQRRSTDHE
201: AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA
301: YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR
101: ILPLKRPELF AYGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA IIFIDEVESF LGQRRSTDHE
201: AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA
301: YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR
Arabidopsis Description
26S proteasome regulatory particle chain RPT6-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T090]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.