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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG20883 Sorghum endoplasmic reticulum 78.57 95.65
Zm00001d014775_P002 Maize plastid 76.47 93.09
Os06t0714500-01 Rice plasma membrane 74.79 90.59
HORVU0Hr1G021880.1 Barley endoplasmic reticulum 70.59 85.28
TraesCS7D01G381400.1 Wheat endoplasmic reticulum 65.97 84.41
TraesCS7B01G287800.1 Wheat golgi 65.97 84.18
TraesCS7A01G384900.1 Wheat endoplasmic reticulum 65.55 83.65
GSMUA_Achr11P... Banana endoplasmic reticulum 65.55 80.41
GSMUA_Achr4P05220_001 Banana endoplasmic reticulum 65.34 80.15
HORVU7Hr1G091480.2 Barley plastid 71.22 78.47
KRH53570 Soybean endoplasmic reticulum, plasma membrane 60.29 73.21
KRH64362 Soybean endoplasmic reticulum, plasma membrane 60.08 72.96
AT4G27680.1 Thale cress endoplasmic reticulum, plasma membrane 60.5 72.36
KRH15897 Soybean endoplasmic reticulum 59.24 72.31
PGSC0003DMT400047633 Potato endoplasmic reticulum 57.14 71.96
CDY55344 Canola endoplasmic reticulum 59.03 71.68
Bra026316.1-P Field mustard endoplasmic reticulum 59.03 71.68
CDY30236 Canola endoplasmic reticulum 59.03 71.68
Bra019030.1-P Field mustard endoplasmic reticulum, plasma membrane 58.82 71.43
CDX92836 Canola endoplasmic reticulum, plasma membrane 58.61 71.36
CDY29857 Canola endoplasmic reticulum, plasma membrane 58.61 71.36
Solyc03g082630.2.1 Tomato endoplasmic reticulum 56.51 71.35
CDY71574 Canola endoplasmic reticulum, plasma membrane 58.61 71.17
CDY19035 Canola endoplasmic reticulum 58.61 71.17
Solyc06g053160.2.1 Tomato endoplasmic reticulum, plasma membrane 58.4 70.92
PGSC0003DMT400013963 Potato endoplasmic reticulum 57.98 70.41
PGSC0003DMT400031598 Potato endoplasmic reticulum 52.31 69.36
CDY14372 Canola endoplasmic reticulum 57.56 69.02
Bra003048.1-P Field mustard endoplasmic reticulum 57.35 68.77
CDY20251 Canola endoplasmic reticulum 57.77 68.41
CDY38752 Canola endoplasmic reticulum 55.25 68.13
AT5G53540.1 Thale cress endoplasmic reticulum 57.35 67.74
Solyc08g083020.2.1 Tomato plastid 50.84 67.41
CDY47077 Canola endoplasmic reticulum, plasma membrane 53.57 65.55
Bra029063.1-P Field mustard endoplasmic reticulum 53.36 64.96
Zm00001d029385_P001 Maize cytosol 18.28 45.55
Zm00001d049686_P001 Maize plastid 19.96 39.75
VIT_16s0098g01260.t01 Wine grape endoplasmic reticulum 58.82 36.27
Zm00001d043410_P002 Maize cytosol 23.95 27.47
Zm00001d039904_P006 Maize cytosol 21.85 23.91
Zm00001d045483_P002 Maize cytosol 24.58 23.49
Zm00001d008596_P005 Maize cytosol 22.06 23.08
Zm00001d011563_P019 Maize mitochondrion 23.74 21.52
Zm00001d011611_P005 Maize cytosol 23.32 21.51
Zm00001d009702_P001 Maize endoplasmic reticulum 33.4 18.86
Zm00001d039315_P003 Maize vacuole 32.77 18.55
Zm00001d008983_P001 Maize vacuole 32.77 18.44
Zm00001d041083_P005 Maize nucleus 24.79 17.4
Zm00001d007139_P007 Maize cytosol, plastid 34.87 15.7
Zm00001d029120_P004 Maize cytosol 35.92 15.19
Zm00001d047494_P007 Maize cytosol 35.08 15.1
Zm00001d052248_P009 Maize mitochondrion 30.46 14.69
Zm00001d048689_P004 Maize plastid 37.4 14.19
Zm00001d007698_P002 Maize plastid 36.97 13.9
Zm00001d043841_P003 Maize cytosol 23.11 12.17
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1UniProt:A0A1D6LMZ3InterPro:AAA+_ATPaseProteinID:AQK80942.1
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0016787InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674PANTHER:PTHR23074
PANTHER:PTHR23074:SF20SMART:SM00382SUPFAM:SSF52540UniParc:UPI000844C6D5EnsemblPlantsGene:Zm00001d036410EnsemblPlants:Zm00001d036410_P002
EnsemblPlants:Zm00001d036410_T002SEG:seg::::
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Coordinates
chr6:-:87193669..87199740
Molecular Weight (calculated)
52675.2 Da
IEP (calculated)
9.338
GRAVY (calculated)
-0.312
Length
476 amino acids
Sequence
(BLAST)
001: MDQIRIGATA TGRSGGPAFL HIYSPKHKQS AESNPLPRSA LRRHLESSSP TSSVLIRFFR RKPDRVDCHR VPSGWAMGSS EPSSRSVQNL VLYAASAALS
101: CLVLLAGLRH LDPNRAASQK AQQQKKEIAK RLGRPLVSTT PYEDVIACDV INPDSIDVEF DSIGGLDKVK QALYELVILP LRRPELFASG KLLSPQKGVL
201: LYGPPGTGKT MLAKAIARES GAVFINVRIS NLMSKWFGDA QKLVSAVFSL AHKLQPAIIF IDEVDSFLGQ RRTTDHEAMT NMKTEFMSLW DGFTTDQNAR
301: VMVLAATNRP SELDEAILRR FTQIFEIGIP VQSERNKILQ VVLKGENVEP NVDYDHIARL CEGFTGSDIL EVCKQAAFYP IRELLDNERN GRKLDVSTLT
401: SVSTKPRPLR QSDLERALST SRKCKKAASS GLQSPLWVRP TDSEDDQVQN AILEISKLMS RIVESSQSEP QEPSSP
Best Arabidopsis Sequence Match ( AT4G27680.1 )
(BLAST)
001: MGGSSETKIL QELILYAASA AFSCLVLFAG LRHLDPNREA SKKALEHKKE ISKRLGRPLV QTNPYEDVIA CDVINPDHID VEFGSIGGLE TIKQALYELV
101: ILPLKRPELF AYGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA IIFIDEVESF LGQRRSTDHE
201: AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA
301: YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR
Arabidopsis Description
26S proteasome regulatory particle chain RPT6-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T090]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.