Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P05220_001 | Banana | endoplasmic reticulum | 93.81 | 93.81 |
| KXG20883 | Sorghum | endoplasmic reticulum | 81.96 | 81.33 |
| Os06t0714500-01 | Rice | plasma membrane | 82.22 | 81.17 |
| TraesCS7D01G381400.1 | Wheat | endoplasmic reticulum | 77.32 | 80.65 |
| TraesCS7A01G384900.1 | Wheat | endoplasmic reticulum | 77.32 | 80.43 |
| TraesCS7B01G287800.1 | Wheat | golgi | 77.32 | 80.43 |
| HORVU0Hr1G021880.1 | Barley | endoplasmic reticulum | 81.44 | 80.2 |
| Zm00001d014775_P002 | Maize | plastid | 80.67 | 80.05 |
| PGSC0003DMT400047633 | Potato | endoplasmic reticulum | 75.0 | 76.98 |
| PGSC0003DMT400013963 | Potato | endoplasmic reticulum | 77.32 | 76.53 |
| Solyc06g053160.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 77.32 | 76.53 |
| Solyc03g082630.2.1 | Tomato | endoplasmic reticulum | 74.23 | 76.39 |
| AT4G27680.1 | Thale cress | endoplasmic reticulum, plasma membrane | 77.32 | 75.38 |
| KRH53570 | Soybean | endoplasmic reticulum, plasma membrane | 75.77 | 75.0 |
| KRH15897 | Soybean | endoplasmic reticulum | 75.0 | 74.62 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 75.0 | 74.42 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 75.0 | 74.42 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 75.0 | 74.23 |
| Bra019030.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 75.0 | 74.23 |
| KRH64362 | Soybean | endoplasmic reticulum, plasma membrane | 75.0 | 74.23 |
| CDY55344 | Canola | endoplasmic reticulum | 74.48 | 73.72 |
| Bra026316.1-P | Field mustard | endoplasmic reticulum | 74.48 | 73.72 |
| CDY30236 | Canola | endoplasmic reticulum | 74.48 | 73.72 |
| CDY19035 | Canola | endoplasmic reticulum | 74.23 | 73.47 |
| HORVU7Hr1G091480.2 | Barley | plastid | 79.9 | 71.76 |
| AT5G53540.1 | Thale cress | endoplasmic reticulum | 73.71 | 70.97 |
| PGSC0003DMT400031598 | Potato | endoplasmic reticulum | 64.95 | 70.19 |
| CDY14372 | Canola | endoplasmic reticulum | 70.88 | 69.27 |
| Bra003048.1-P | Field mustard | endoplasmic reticulum | 70.62 | 69.02 |
| CDY20251 | Canola | endoplasmic reticulum | 70.88 | 68.41 |
| Solyc08g083020.2.1 | Tomato | plastid | 63.14 | 68.25 |
| CDY38752 | Canola | endoplasmic reticulum | 67.01 | 67.36 |
| Zm00001d036410_P002 | Maize | plastid | 80.41 | 65.55 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 65.46 | 65.3 |
| Bra029063.1-P | Field mustard | endoplasmic reticulum | 65.21 | 64.71 |
| VIT_16s0098g01260.t01 | Wine grape | endoplasmic reticulum | 76.55 | 38.47 |
| GSMUA_Achr11P... | Banana | cytosol | 30.41 | 37.34 |
| GSMUA_Achr11P... | Banana | cytosol | 29.12 | 35.65 |
| GSMUA_Achr10P... | Banana | cytosol | 29.38 | 29.46 |
| GSMUA_Achr7P25300_001 | Banana | cytosol | 29.38 | 28.01 |
| GSMUA_Achr6P09890_001 | Banana | cytosol | 21.65 | 27.63 |
| GSMUA_Achr4P24320_001 | Banana | cytosol | 28.09 | 26.72 |
| GSMUA_Achr2P22550_001 | Banana | cytosol | 27.58 | 25.97 |
| GSMUA_Achr3P01430_001 | Banana | cytosol | 27.32 | 25.79 |
| GSMUA_Achr9P05420_001 | Banana | cytosol, mitochondrion | 39.95 | 23.77 |
| GSMUA_Achr11P... | Banana | cytosol | 41.24 | 22.7 |
| GSMUA_Achr10P... | Banana | cytosol | 29.64 | 22.12 |
| GSMUA_Achr7P14270_001 | Banana | cytosol | 39.18 | 21.5 |
| GSMUA_Achr11P... | Banana | cytosol | 41.75 | 18.02 |
| GSMUA_Achr4P00810_001 | Banana | cytosol | 28.35 | 18.0 |
| GSMUA_Achr6P27610_001 | Banana | cytosol | 29.38 | 17.4 |
| GSMUA_Achr8P10090_001 | Banana | cytosol | 41.49 | 14.81 |
| GSMUA_Achr7P07310_001 | Banana | mitochondrion | 39.95 | 14.78 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 42.01 | 14.76 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 41.49 | 14.04 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr11G06710_001 | EnsemblPlants:GSMUA_Achr11P06710_001 | EnsemblPlants:GSMUA_Achr11T06710_001 | UniProt:M0RQ01 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | ScanProsite:PS00674 | PFscan:PS51257 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF20 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0002955831 | : | : | : |
Description
Putative ATPase family AAA domain-containing protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G06710_001]
Coordinates
chr11:+:5248601..5257927
Molecular Weight (calculated)
43314.2 Da
IEP (calculated)
6.391
GRAVY (calculated)
-0.254
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSESRFLQ ELVLYAASAA LSCLVLFAGL RQLDPNRAAS KKALENKKEI AKRLGRPLVQ TNQYEDVIAC DVINPDHIDV EFESIGGLEH VKQALFELVI
101: LPLRRPELFS HGKLLSPQKG VLLYGPPGTG KTMLAKALAK ESGAVFINVR ISNLMSKWFG DAQKLVAAVF SLAYKLQPAI IFIDEVDSFL GQRRNTDHEA
201: MTNMKTEFMS LWDGFTTDLN ARVMVLAATN RPSELDEAIL RRFTQTFEIG MPDRSERAKI LKVILKGENV EENIDYDYIA TLCEGFSGSD ILELCKQAAY
301: FPLRELLNDE RNGKASSGPR PLRQPDLERA LVTSRKVKKA TGMSRLGSQS PPWSMQAEPD DEEVHNAILE ISKLMSRIVG NQSESQDS
101: LPLRRPELFS HGKLLSPQKG VLLYGPPGTG KTMLAKALAK ESGAVFINVR ISNLMSKWFG DAQKLVAAVF SLAYKLQPAI IFIDEVDSFL GQRRNTDHEA
201: MTNMKTEFMS LWDGFTTDLN ARVMVLAATN RPSELDEAIL RRFTQTFEIG MPDRSERAKI LKVILKGENV EENIDYDYIA TLCEGFSGSD ILELCKQAAY
301: FPLRELLNDE RNGKASSGPR PLRQPDLERA LVTSRKVKKA TGMSRLGSQS PPWSMQAEPD DEEVHNAILE ISKLMSRIVG NQSESQDS
001: MGGSSETKIL QELILYAASA AFSCLVLFAG LRHLDPNREA SKKALEHKKE ISKRLGRPLV QTNPYEDVIA CDVINPDHID VEFGSIGGLE TIKQALYELV
101: ILPLKRPELF AYGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA IIFIDEVESF LGQRRSTDHE
201: AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA
301: YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR
101: ILPLKRPELF AYGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA IIFIDEVESF LGQRRSTDHE
201: AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA
301: YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR
Arabidopsis Description
26S proteasome regulatory particle chain RPT6-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T090]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.