Factsheet for GSMUA_Achr7P14270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	63.79	69.17
GSMUA_Achr11P...	Banana	cytosol	28.57	63.92
GSMUA_Achr11P...	Banana	cytosol	27.3	60.88
Os01t0226400-01	Rice	plasma membrane	70.86	59.64
Zm00001d008983_P001	Maize	vacuole	70.3	58.75
Zm00001d039315_P003	Maize	vacuole	69.45	58.38
EES00021	Sorghum	endoplasmic reticulum	69.73	58.21
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	68.03	57.26
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	68.03	57.19
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	67.61	57.18
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	67.75	57.02
GSMUA_Achr11P...	Banana	endoplasmic reticulum	21.5	39.18
GSMUA_Achr4P05220_001	Banana	endoplasmic reticulum	20.93	38.14
GSMUA_Achr11P...	Banana	cytosol	37.48	37.59
GSMUA_Achr10P...	Banana	cytosol	17.4	31.78
GSMUA_Achr7P25300_001	Banana	cytosol	17.11	29.73
GSMUA_Achr6P09890_001	Banana	cytosol	12.45	28.95
GSMUA_Achr2P22550_001	Banana	cytosol	16.55	28.4
GSMUA_Achr11P...	Banana	cytosol	36.07	28.36
GSMUA_Achr3P01430_001	Banana	cytosol	16.41	28.22
GSMUA_Achr4P24320_001	Banana	cytosol	16.12	27.94
GSMUA_Achr8P33760_001	Banana	cytosol	40.59	26.0
GSMUA_Achr10P...	Banana	cytosol	18.95	25.77
GSMUA_Achr3P00740_001	Banana	mitochondrion	39.89	24.59
GSMUA_Achr8P10090_001	Banana	cytosol	36.92	24.01
GSMUA_Achr7P07310_001	Banana	mitochondrion	33.38	22.5
GSMUA_Achr6P27610_001	Banana	cytosol	20.37	21.98
GSMUA_Achr4P00810_001	Banana	cytosol	18.39	21.28

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr7G14270_001	EnsemblPlants:GSMUA_Achr7P14270_001	EnsemblPlants:GSMUA_Achr7T14270_001	UniProt:M0THG4
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000295418C	SEG:seg	:	:

Description

AAA-type ATPase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G14270_001]

Coordinates

chr7:-:11442843..11450499

Molecular Weight (calculated)

79634.0 Da

IEP (calculated)

5.858

GRAVY (calculated)

-0.290

Length

707 amino acids

Sequence
(BLAST)

001: MSGLFGSLSI MPQREEPKVT SRDTLSCLYL KYCNWKSEST SNAPKLRRNA SASADMSCLG TQCPPLNPAL LKRTISWSFD EKLLVQSLYK VLHSISKNSP
101: IVLYLRDVDS LLFISKRMYS LFEKLLKRIS GQVLILGSRK VEAGSDFREV DEKLSLLFPY NIEIKPPEDE THLVSWKAQL EEDMKMIQFQ DNRNHITEVL
201: ARNDLDCDDL GSICLTDTMV LSKYIEEIVV SAISYHLMNN TDPEYRNGKL VISSKSLSHA LSIFQENKLN AKGTAQLEGS ADSMKESGKE DSTSAKKSET
301: KTEASPPESK TELDKSVPVV KKDSVVPSQP PKAPEVAPDN EFEKRIRPEV IPASEIGVTF DDIGALDDIK ESLQELVMLP LRRPDLFKGG LLKPCRGILL
401: FGPPGTGKTM LAKAIANEAG ASFINVSMST ITSKWFGEDE KNVRALFTLA AKVSPTIVFV DEVDSMLGQR SRVGEHEAMR KIKNEFMTHW DGLLTKPEER
501: ILVLAATNRP FDLDEAIIRR FERRIMVGLP SQESRELILR TLLSKEKVEE KLDFKELATM TEGYSGSDLK NLCTTAAYRP VRELIQKERL KELVLLFFCI
601: FFPFIFDCSH YFFPAGSSFM MIFVALLISI SFKKAEDNQA EASETKAEDR EETIVLRPLN MEDMKQAKNQ VAASFAAEGS IMSELKQWNE LYGDGGSRKK
701: QQLTYFL

Best Arabidopsis Sequence Match ( AT1G64110.3 )
(BLAST)

001: MDSKQMLLSA LGVGVGVGVG LGLASGQAVG KWAGGNSSSN NAVTADKMEK EILRQVVDGR ESKITFDEFP YYLSEQTRVL LTSAAYVHLK HFDASKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQAPLKR SSSWSFDEKL LVQSLYKVLA YVSKANPIVL YLRDVENFLF RSQRTYNLFQ KLLQKLSGPV
301: LILGSRIVDL SSEDAQEIDE KLSAVFPYNI DIRPPEDETH LVSWKSQLER DMNMIQTQDN RNHIMEVLSE NDLICDDLES ISFEDTKVLS NYIEEIVVSA
401: LSYHLMNNKD PEYRNGKLVI SSISLSHGFS LFREGKAGGR EKLKQKTKEE SSKEVKAESI KPETKTESVT TVSSKEEPEK EAKAEKVTPK APEVAPDNEF
501: EKRIRPEVIP AEEINVTFKD IGALDEIKES LQELVMLPLR RPDLFTGGLL KPCRGILLFG PPGTGKTMLA KAIAKEAGAS FINVSMSTIT SKWFGEDEKN
601: VRALFTLASK VSPTIIFVDE VDSMLGQRTR VGEHEAMRKI KNEFMSHWDG LMTKPGERIL VLAATNRPFD LDEAIIRRFE RRIMVGLPAV ENREKILRTL
701: LAKEKVDENL DYKELAMMTE GYTGSDLKNL CTTAAYRPVR ELIQQERIKD TEKKKQREPT KAGEEDEGKE ERVITLRPLN RQDFKEAKNQ VAASFAAEGA
801: GMGELKQWNE LYGEGGSRKK EQLTYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.