Factsheet for GSMUA_Achr9P05420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

plastid 2
nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08796	Soybean	cytosol	21.93	82.18
KRH08789	Soybean	cytosol	35.12	68.36
GSMUA_Achr7P14270_001	Banana	cytosol	69.17	63.79
GSMUA_Achr11P...	Banana	cytosol	30.67	63.29
GSMUA_Achr11P...	Banana	cytosol	29.14	59.94
CDX96166	Canola	cytosol	58.13	55.82
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	70.55	54.96
KRH38312	Soybean	endoplasmic reticulum	68.56	54.71
KRH08780	Soybean	extracellular, plasma membrane	68.4	54.59
PGSC0003DMT400051401	Potato	endoplasmic reticulum	67.64	53.13
CDY56163	Canola	extracellular, vacuole	65.34	52.92
CDY49165	Canola	extracellular, plasma membrane	63.34	52.88
CDY51824	Canola	extracellular, plasma membrane	65.34	52.85
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	66.87	52.78
CDY19639	Canola	extracellular, vacuole	64.72	52.55
Bra003102.1-P	Field mustard	extracellular, plasma membrane	65.49	51.95
Bra029104.1-P	Field mustard	extracellular, plasma membrane	65.49	51.88
AT5G52882.1	Thale cress	extracellular, vacuole	65.8	51.75
AT4G28000.2	Thale cress	extracellular	65.64	51.44
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	65.18	51.27
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	63.5	50.43
CDX89214	Canola	extracellular, plasma membrane	55.37	47.63
CDY19014	Canola	endoplasmic reticulum, extracellular	48.93	44.43
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.63	43.37
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.17	42.76
GSMUA_Achr11P...	Banana	endoplasmic reticulum	23.77	39.95
GSMUA_Achr4P05220_001	Banana	endoplasmic reticulum	23.16	38.92
GSMUA_Achr11P...	Banana	cytosol	40.03	37.02
GSMUA_Achr10P...	Banana	cytosol	19.79	33.33
GSMUA_Achr7P25300_001	Banana	cytosol	19.33	30.96
GSMUA_Achr6P09890_001	Banana	cytosol	13.19	28.29
GSMUA_Achr11P...	Banana	cytosol	38.8	28.14
GSMUA_Achr4P24320_001	Banana	cytosol	17.33	27.7
GSMUA_Achr2P22550_001	Banana	cytosol	17.48	27.67
GSMUA_Achr3P01430_001	Banana	cytosol	17.18	27.25
GSMUA_Achr8P33760_001	Banana	cytosol	42.94	25.36
GSMUA_Achr10P...	Banana	cytosol	20.09	25.19
GSMUA_Achr3P00740_001	Banana	mitochondrion	42.18	23.98
GSMUA_Achr8P10090_001	Banana	cytosol	39.11	23.46
GSMUA_Achr6P27610_001	Banana	cytosol	22.55	22.44
GSMUA_Achr7P07310_001	Banana	mitochondrion	35.58	22.12
GSMUA_Achr4P00810_001	Banana	cytosol	20.25	21.6

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr9G05420_001	EnsemblPlants:GSMUA_Achr9P05420_001
EnsemblPlants:GSMUA_Achr9T05420_001	UniProt:M0TXQ1	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF98	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002949439	SEG:seg	:

Description

AAA-type ATPase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G05420_001]

Coordinates

chr9:+:3486000..3491850

Molecular Weight (calculated)

73264.7 Da

IEP (calculated)

5.794

GRAVY (calculated)

-0.438

Length

652 amino acids

Sequence
(BLAST)

001: MLIAGMFRRQ SSSMELRQRR PDYANSTNEL PKTASFSAEM GGLTSQHGSR NMVNPKRSSC WSFDEKILIH SLYKVLILIS KSNPIILYIR DVEHFICRSE
101: RVYSLFQKML TKLSGHVIIL GSRLSEPDNC CKDVDARLTT LFPYNIEIKP PEDENHLVSW KSQLEKDTKT IQIQDNRNHI TEVLAANDLE CDDLGTICLS
201: DILVLSTYIE EIVVSAVSYH LMNNKDPQYR NGKLVITSKS LSHGLSIFQD SRLCGKDTLK LEASAESEED VNEDARTATK PENNGEALLP GNKSETEKST
301: TLVKDGETLT PIKVPEVAPD NEFEKRIRPE VIPANEIGVT FDDIGALDET KESLQELIIL PLQRPDLFKG LLKPCRGILL FGPPGTGKTM LAKAIANEAG
401: ASFINVSMST ITSKWFGEDE KHVRALFTLA AKVAPTIIFV DEVDGMLGQR TRVGEHEAMR KIKNEFMTRW DGLLTKPGER ILVLAATNRP FDLDEAIIRR
501: FERRIMVGLP SLESRESILR KLLSKEKVEG LDYKELATMT EGYSGSDLKN LCITAAYRPL RELIQRERSK ELGKKQKTEE GESSSAGSEN RDEDDQPAIA
601: LRPLNMDDLR QAKNQVAASF AAEGSVMNEL KQWNDLYGDG GSRKRQQLTY FL

Best Arabidopsis Sequence Match ( AT4G28000.1 )
(BLAST)

001: MEQKSVLFSA LGVGVGLGIG LASGQSLGKW ANGSISAEDG LTGEKIEQEL VRQIVDGRES SVTFDEFPYY LSEKTRLLLT SAAYVHLKQS DISKHTRNLA
101: PGSKAILLSG PAEFYQQMLA KALAHYFESK LLLLDITDFS IKIQSKYGCV KKEPSHKRSI SELTMDKMSN LMGSISVLSQ KEATRGTLRR HTSGNDLHSR
201: GFDVTSQPPR LKRNASAASD MSSISSRSAT SVSASSKRSA NLCFDERLFL QSLYKVLVSI SETNPIIIYL RDVEKLCQSE RFYKLFQRLL TKLSGPVLVL
301: GSRLLEPEDD CQEVGEGISA LFPYNIEIRP PEDENQLMSW KTRFEDDMKV IQFQDNKNHI AEVLAANDLE CDDLGSICHA DTMFLSSHIE EIVVSAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLNILQE GQGCFEDSLK LDTNIDSKVE EGEGITKSES KSETTVPENK NESDTSIPAA KNECPLPPKA PEVAPDNEFE
501: KRIRPEVIPA NEIGVTFADI GSLDETKESL QELVMLPLRR PDLFKGGLLK PCRGILLFGP PGTGKTMMAK AIANEAGASF INVSMSTITS KWFGEDEKNV
601: RALFTLAAKV SPTIIFVDEV DSMLGQRTRV GEHEAMRKIK NEFMTHWDGL MSNAGDRILV LAATNRPFDL DEAIIRRFER RIMVGLPSVE SREKILRTLL
701: SKEKTENLDF QELAQMTDGY SGSDLKNFCT TAAYRPVREL IKQECLKDQE RRKREEAEKN SEEGSEAKEE VSEERGITLR PLSMEDMKVA KSQVAASFAA
801: EGAGMNELKQ WNDLYGEGGS RKKEQLSYFL

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G28000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.