Factsheet for GSMUA_Achr11P20320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	71.84	71.61
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	63.29	30.67
GSMUA_Achr11P...	Banana	endoplasmic reticulum	37.34	30.41
GSMUA_Achr4P05220_001	Banana	endoplasmic reticulum	36.39	29.64
GSMUA_Achr7P14270_001	Banana	cytosol	63.92	28.57
GSMUA_Achr10P...	Banana	cytosol	31.96	26.1
GSMUA_Achr7P25300_001	Banana	cytosol	31.33	24.32
EES20020	Sorghum	endoplasmic reticulum	62.03	23.28
GSMUA_Achr11P...	Banana	cytosol	51.9	23.26
Os05t0584600-02	Rice	vacuole	62.34	23.04
Zm00001d009702_P001	Maize	endoplasmic reticulum	61.39	23.01
TraesCS3D01G228100.4	Wheat	cytosol	57.59	22.66
HORVU3Hr1G055830.5	Barley	cytosol	57.91	22.65
TraesCS3A01G225200.3	Wheat	cytosol	57.59	22.55
TraesCS3B01G254800.2	Wheat	cytosol	57.28	22.48
TraesCS1D01G431700.1	Wheat	mitochondrion	60.13	22.33
HORVU1Hr1G092440.13	Barley	cytosol, golgi, mitochondrion, plastid	61.08	22.26
TraesCS1B01G455200.1	Wheat	mitochondrion	60.13	22.25
TraesCS1A01G423100.1	Wheat	mitochondrion	59.81	22.18
KXG32842	Sorghum	cytosol	53.48	21.81
Os01t0623500-01	Rice	cytosol	56.01	21.8
KXG32925	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	55.06	20.96
GSMUA_Achr4P24320_001	Banana	cytosol	26.58	20.59
GSMUA_Achr6P09890_001	Banana	cytosol	19.62	20.39
GSMUA_Achr3P01430_001	Banana	cytosol	26.27	20.19
GSMUA_Achr10P...	Banana	cytosol	33.23	20.19
GSMUA_Achr2P22550_001	Banana	cytosol	26.27	20.15
GSMUA_Achr11P...	Banana	cytosol	50.32	17.69
GSMUA_Achr4P00810_001	Banana	cytosol	31.33	16.2
GSMUA_Achr8P33760_001	Banana	cytosol	53.48	15.31
GSMUA_Achr6P27610_001	Banana	cytosol	31.33	15.11
GSMUA_Achr8P10090_001	Banana	cytosol	50.95	14.81
GSMUA_Achr3P00740_001	Banana	mitochondrion	52.53	14.47
GSMUA_Achr7P07310_001	Banana	mitochondrion	44.62	13.44

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G20320_001	EnsemblPlants:GSMUA_Achr11P20320_001	EnsemblPlants:GSMUA_Achr11T20320_001	UniProt:M0RTW2	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000294C1C0	SEG:seg	:	:	:

Description

Putative Fidgetin-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G20320_001]

Coordinates

chr11:+:21318702..21320858

Molecular Weight (calculated)

35844.5 Da

IEP (calculated)

7.346

GRAVY (calculated)

-0.182

Length

316 amino acids

Sequence
(BLAST)

001: MRSYIIPPNE ITVTFEDIGA LDEIKELLQE LIILPLKRPE LFKGLLKPCR GILLFGPPGT GKTMLAKALA HEAGATFINV SMSAIASKWF GDSERTGDRD
101: KVASVRNEFM IHWDGLLTKS EERILVLAAT NRPFNLDEAI IRRFERRIMV GFPSLESREL ILRTLLSKEN AEQLDVKELA TMTVGYSSSD LKNLCVAAAY
201: RPLRELIQRE KSMRLVDNVI WVINILLLFT ALLVLDNILC RRRHLDTPKK QSTTEEQSIE SATACRSLNM EDFREAMNQI AASCTSESSP SKQLEQWNEL
301: YGDGGSRKKQ QLSYFF

Best Arabidopsis Sequence Match ( AT1G64110.1 )
(BLAST)

001: MLLSALGVGV GVGVGLGLAS GQAVGKWAGG NSSSNNAVTA DKMEKEILRQ VVDGRESKIT FDEFPYYLSE QTRVLLTSAA YVHLKHFDAS KYTRNLSPAS
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.