Factsheet for Os01t0623500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G055830.5	Barley	cytosol	65.76	66.09
TraesCS3A01G225200.3	Wheat	cytosol	65.64	66.05
TraesCS3B01G254800.2	Wheat	cytosol	65.15	65.71
TraesCS3D01G228100.4	Wheat	cytosol	64.9	65.63
KXG32842	Sorghum	cytosol	54.8	57.42
KXG32925	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	58.37	57.11
GSMUA_Achr11P...	Banana	cytosol	21.8	56.01
Os11t0661400-01	Rice	cytosol	16.5	55.6
Os02t0749150-01	Rice	mitochondrion	18.23	55.22
Os05t0584600-02	Rice	vacuole	56.77	53.92
GSMUA_Achr11P...	Banana	cytosol	20.81	53.31
Os06t0225900-01	Rice	cytosol	23.28	51.5
Os01t0226400-01	Rice	plasma membrane	52.59	50.83
Os06t0714500-01	Rice	plasma membrane	18.84	38.93
Os01t0141100-02	Rice	cytosol, plasma membrane	13.3	35.64
Os03t0344700-01	Rice	cytosol	32.64	34.19
Os01t0757400-02	Rice	cytosol	15.15	31.87
Os06t0130000-02	Rice	cytosol	18.6	31.01
Os01t0673500-01	Rice	cytosol	15.15	30.0
Os02t0159900-01	Rice	plasma membrane	15.27	28.64
Os01t0683100-01	Rice	extracellular	17.49	27.36
Os07t0672500-02	Rice	cytosol, plastid	34.61	25.99
Os01t0141300-00	Rice	cytosol	14.78	25.1
Os12t0443800-01	Rice	nucleus	3.94	8.38

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:4326678	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	ProteinID:BAB21091.1	ProteinID:BAF05530.1	ProteinID:BAS73232.1	ncoils:Coil	ProteinID:EAZ12740.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
GO:GO:0016887	GO:GO:0051301	EnsemblPlantsGene:Os01g0623500	EnsemblPlants:Os01t0623500-01	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF100	UniProt:Q9AX97	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI00000AB688	RefSeq:XP_015621287.1	SEG:seg	:	:

Description

ATPase, AAA-type, core domain containing protein. (Os01t0623500-01)

Coordinates

chr1:+:24894706..24899506

Molecular Weight (calculated)

89859.5 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.341

Length

812 amino acids

Sequence
(BLAST)

001: MEHGSIIASA VGVGVGVGVG IGLVSSRLTG LATGGGATAA EVEAELRCLV VDGRDVGVSF DDFPYYLSEQ SKLALTSTAF VHLSPTILPN HIRVLSASSR
101: TILLCGPSEA YLQSLAKALA NQFSARLLLL DVIDFACKLH HKYGGPSNTQ TRERSMTEAA FDRVSSLVGA FNLFRKKEEP TGTGPLSRET GILDLRTSTC
201: CPHNTPSVRV QLSLVPPEKD HDPESSKYLA SVKPCWSLNE KVLIQSLYKI IVSASEISPV ILYIRDVDDL LGSSEKAYCM FQKMLKKLSG RVIVIGSQFL
301: DDDEDREDIE ESVCALFPCI LETKPPKDKV LLEKWKTQME EDSNNNNNQV VQNYIAEVLA ENNLECEDLS SINADDDCKI IVAYLEEIIT PSVSYHLMNN
401: KNPKYRNGNL VISSESLSHG LRIFQESNDL GKDTVEAKDE TEMVVPDNEY EKKIRPTVIP ANEIGVTFDD IGALADIKEC LHELVMLPLQ RPDFFKGGLL
501: KPCKGVLLFG PPGTGKTMLA KALANAAGAS FLNISMASMT SKWYGESEKC IQALFSLAAK LAPAIIFIDE VDSMLGKRDN HSENEASRRV KNEFMAHWDG
601: LLSKSNERIL VLAATNRPFD LDDAVIRRFE HRIMVGLPTL ESRELILKTL LSKETVENID FKELAKMTEG YTSSDLKNIC VTAAYHPVRE LLQKEKNKVK
701: KETAPETKQE PKEKTKIQEN GTKSSDSKTE KDKLDNKEGK KDKPADKKDK SDKGDAGETT LRPLNMEDLR KAKDEVAASF ASEGVVMNQI KEWNELYGKG
801: GSRKREQLTY FL

Best Arabidopsis Sequence Match ( AT1G64110.4 )
(BLAST)

001: MDSKQMLLSA LGVGVGVGVG LGLASGQAVG KWAGGNSSSN NAVTADKMEK EILRQVVDGR ESKITFDEFP YYLSEQTRVL LTSAAYVHLK HFDASKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQVSAPL KRSSSWSFDE KLLVQSLYKV LAYVSKANPI VLYLRDVENF LFRSQRTYNL FQKLLQKLSG
301: PVLILGSRIV DLSSEDAQEI DEKLSAVFPY NIDIRPPEDE THLVSWKSQL ERDMNMIQTQ DNRNHIMEVL SENDLICDDL ESISFEDTKV LSNYIEEIVV
401: SALSYHLMNN KDPEYRNGKL VISSISLSHG FSLFREGKAG GREKLKQKTK EESSKEVKAE SIKPETKTES VTTVSSKEEP EKEAKAEKVT PKAPEVAPDN
501: EFEKRIRPEV IPAEEINVTF KDIGALDEIK ESLQELVMLP LRRPDLFTGG LLKPCRGILL FGPPGTGKTM LAKAIAKEAG ASFINVSMST ITSKWFGEDE
601: KNVRALFTLA SKVSPTIIFV DEVDSMLGQR TRVGEHEAMR KIKNEFMSHW DGLMTKPGER ILVLAATNRP FDLDEAIIRR FERRIMVGLP AVENREKILR
701: TLLAKEKVDE NLDYKELAMM TEGYTGSDLK NLCTTAAYRP VRELIQQERI KDTEKKKQRE PTKAGEEDEG KEERVITLRP LNRQDFKEAK NQVAASFAAE
801: GAGMGELKQW NELYGEGGSR KKEQLTYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.