Factsheet for Os06t0130000-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
nucleus 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G065800.1	Wheat	cytosol	89.32	90.62
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.32	90.62
TraesCS7D01G060200.1	Wheat	cytosol	88.5	90.36
EER87773	Sorghum	cytosol	87.27	86.73
Zm00001d045483_P002	Maize	cytosol	88.3	86.35
HORVU7Hr1G013190.8	Barley	plastid	88.09	76.74
CDY18925	Canola	plastid	53.59	72.1
Bra004917.1-P	Field mustard	cytosol	46.41	70.85
GSMUA_Achr10P...	Banana	cytosol	72.9	68.27
KRH40573	Soybean	cytosol, plastid	67.76	67.9
CDX74745	Canola	cytosol	66.12	67.79
KRH00594	Soybean	cytosol, plastid	67.56	67.01
VIT_15s0048g01720.t01	Wine grape	cytosol	67.35	66.8
AT2G45500.5	Thale cress	cytosol	66.94	65.59
Bra039332.1-P	Field mustard	cytosol	58.11	64.76
Solyc01g094150.2.1	Tomato	nucleus	64.68	64.15
CDY37046	Canola	cytosol	66.12	63.01
CDY27380	Canola	nucleus	65.71	43.13
Os02t0749150-01	Rice	mitochondrion	23.41	42.54
Os01t0141100-02	Rice	cytosol, plasma membrane	26.28	42.24
Os01t0757400-02	Rice	cytosol	30.39	38.34
Os11t0661400-01	Rice	cytosol	18.48	37.34
Os06t0225900-01	Rice	cytosol	27.52	36.51
Os01t0673500-01	Rice	cytosol	30.6	36.34
Os02t0159900-01	Rice	plasma membrane	29.77	33.49
Os01t0141300-00	Rice	cytosol	28.54	29.08
Os06t0714500-01	Rice	plasma membrane	23.41	29.01
Os01t0683100-01	Rice	extracellular	30.6	28.71
Os01t0623500-01	Rice	cytosol	31.01	18.6
Os01t0226400-01	Rice	plasma membrane	32.03	18.57
Os03t0344700-01	Rice	cytosol	28.95	18.19
Os05t0584600-02	Rice	vacuole	30.18	17.19
Os07t0672500-02	Rice	cytosol, plastid	30.39	13.69
Os12t0443800-01	Rice	nucleus	5.34	6.81

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	EntrezGene:4339999	MapMan:50.3.6	InterPro:AAA+_ATPase	EMBL:AK070084
EMBL:AK119321	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ProteinID:BAD44799.1	ProteinID:BAF18600.1	ProteinID:BAS95968.1
EMBL:EF211826	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787	GO:GO:0016887
InterPro:MIT	EnsemblPlantsGene:Os06g0130000	EnsemblPlants:Os06t0130000-02	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF86	UniProt:Q658G8	SMART:SM00382	SMART:SM00745
SUPFAM:SSF52540	UniParc:UPI000043A0C3	InterPro:Vps4_C	RefSeq:XP_015643962.1	SEG:seg	:

Description

LESION RESEMBLING DISEASE 6-6AAA-type ATPase, Defense response (Os06t0130000-01);Similar to Tobacco mosaic virus helicase domain-binding protein (Fragment). (Os06t0130000-02);Similar to ATP binding. (Os06t0130000-03)

Coordinates

chr6:+:1588505..1602310

Molecular Weight (calculated)

53564.1 Da

IEP (calculated)

9.992

GRAVY (calculated)

-0.381

Length

487 amino acids

Sequence
(BLAST)

001: MSFLRALADS LSSLLYSAAA KGGDMDGAAA APSPAAVVGE RVAVKLRGYF ELAKEEIDKA VRAEEWGLPD DAAAHYRNAL RVMLEAKAAR VPDAVSSSER
101: GQVRVYQEKI AKWQTQVEER LRVLGQRSGA AAPVPKKVVT NNPVNRNDRA ASTSFHRPTS QPSPTFNRGG QASSHQKSSS GGAKPVQRAG ANYDDKLVEM
201: INTTIVDRSP AVKWEDVAGL DKAKQALMEM VILPTKRRDL FTGLRRPARG LLLFGPPGNG KTMLAKAVAS ESEATFFNVS ASSLTSKWVG EAEKLVRTLF
301: MVAVDRQPSV IFMDEIDSVM SARLANENDA SRRLKSEFLI QFDGVTSNPD DLVIVIGATN KPQELDDAVL RRLVKRIYVP LPDPNVRRLL LKTQLKGQSF
401: KLSSHDLERL AADTEGYSGS DLRALCEEAA MMPIRELGPQ NILTIKANQL RPLKYEDFKK AMTVIRPSLQ KSKWDELEKW NEEFGSS

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.