CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045483_P002	Maize	cytosol	95.92	94.38
TraesCS7D01G060200.1	Wheat	cytosol	85.92	88.26
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.33	88.12
TraesCS7A01G065800.1	Wheat	cytosol	85.71	87.5
Os06t0130000-02	Rice	cytosol	86.73	87.27
HORVU7Hr1G013190.8	Barley	plastid	85.71	75.13
CDY18925	Canola	plastid	52.86	71.55
Bra004917.1-P	Field mustard	cytosol	45.71	70.22
KRH40573	Soybean	cytosol, plastid	67.76	68.31
GSMUA_Achr10P...	Banana	cytosol	71.63	67.5
KRH00594	Soybean	cytosol, plastid	67.55	67.41
VIT_15s0048g01720.t01	Wine grape	cytosol	67.35	67.21
CDX74745	Canola	cytosol	65.1	67.16
Bra039332.1-P	Field mustard	cytosol	58.57	65.68
AT2G45500.5	Thale cress	cytosol	66.33	65.39
CDY37046	Canola	cytosol	66.12	63.41
Solyc01g094150.2.1	Tomato	nucleus	62.24	62.12
CDY27380	Canola	nucleus	65.51	43.26
EES01499	Sorghum	cytosol	28.98	37.27
OQU87315	Sorghum	cytosol	29.8	36.23
EES00346	Sorghum	cytosol	31.22	35.09
KXG20883	Sorghum	endoplasmic reticulum	23.27	29.16
EES01274	Sorghum	cytosol	30.2	28.52
KXG19781	Sorghum	cytosol	28.57	26.32
KXG23422	Sorghum	nucleus	36.33	25.87
KXG32842	Sorghum	cytosol	30.82	19.48
KXG32925	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	31.02	18.31
EES00021	Sorghum	endoplasmic reticulum	31.22	18.06
EES20020	Sorghum	endoplasmic reticulum	29.59	17.22
OQU76102	Sorghum	mitochondrion	30.2	15.29
EES16128	Sorghum	cytosol, plastid	28.37	14.91
EES05524	Sorghum	plastid	29.39	14.59
OQU79278	Sorghum	cytosol, plastid	25.1	13.34
OQU90457	Sorghum	cytosol, plastid	29.59	13.25
EER92288	Sorghum	cytosol	28.98	12.79
KXG29076	Sorghum	plastid	30.0	11.9

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:50.3.6	EntrezGene:8069056	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	UniProt:C5Z3A1	EnsemblPlants:EER87773	ProteinID:EER87773	ProteinID:EER87773.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0016787	GO:GO:0016887	InterPro:MIT	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF86	SMART:SM00382	SMART:SM00745
EnsemblPlantsGene:SORBI_3010G020300	SUPFAM:SSF52540	unigene:Sbi.1401	SignalP:SignalP-noTM	UniParc:UPI0001A88E98	RefSeq:XP_002436406.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:1638027..1644389

Molecular Weight (calculated)

54072.8 Da

IEP (calculated)

9.945

GRAVY (calculated)

-0.360

Length

490 amino acids

Sequence
(BLAST)

001: MSFLRSLADS FSSLLFSSWG EAAPMDAAGA APSPAAVVGE RVAVKLRGYF DLAKEEIDKA VRAEEWGLPD EATAHYRNAM RVMLEAKAAR VPDAVSSSER
101: GQVRVYQEKI AKWQAQVEER LRVLGRRSGE GATTAVVPKK VAASNPIGRT ARTAPNSIQR SPLQNSPTFN RGGQASGHQK IGSGASRPVQ KAGGSYDDKL
201: VEMINTTIVD RSPAVKWDDV AGLDKAKQAL MEMVILPTKR RDLFTGLRRP ARGLLLFGPP GNGKTMLAKA VASESEATFF NVSASSLTSK WVGEAEKLVR
301: TLFMVAIDRQ PSVIFMDEID SVMSTRLANE NDSSRRLKSE FLIQFDGVSS NPDDLVIVIG ATNKPQELDD AVLRRLVKRI YVPLPDPNVR KLLLKNQLRG
401: QAFKLSNYDF ERLAVETEGY SGSDLRALCE EAAMMPIREL GPQNILTIKA NQLRPLRYED FKNAMTVIRP SLQKSKWDEL EKWNEEFGSS

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.