Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039332.1-P | Field mustard | cytosol | 83.17 | 97.25 |
| CDY18925 | Canola | plastid | 65.75 | 92.82 |
| CDX74745 | Canola | cytosol | 84.34 | 90.74 |
| AT2G45500.5 | Thale cress | cytosol | 80.43 | 82.7 |
| KRH40573 | Soybean | cytosol, plastid | 67.51 | 70.99 |
| KRH00594 | Soybean | cytosol, plastid | 67.12 | 69.86 |
| VIT_15s0048g01720.t01 | Wine grape | cytosol | 65.95 | 68.64 |
| TraesCS7D01G060200.1 | Wheat | cytosol | 62.23 | 66.67 |
| TraesCS4A01G422400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 62.43 | 66.46 |
| TraesCS7A01G065800.1 | Wheat | cytosol | 62.23 | 66.25 |
| EER87773 | Sorghum | cytosol | 63.41 | 66.12 |
| Os06t0130000-02 | Rice | cytosol | 63.01 | 66.12 |
| Zm00001d045483_P002 | Maize | cytosol | 63.6 | 65.26 |
| Solyc01g094150.2.1 | Tomato | nucleus | 62.04 | 64.56 |
| CDY27380 | Canola | nucleus | 93.54 | 64.42 |
| GSMUA_Achr10P... | Banana | cytosol | 59.3 | 58.27 |
| HORVU7Hr1G013190.8 | Barley | plastid | 62.62 | 57.25 |
| CDX84641 | Canola | cytosol | 27.2 | 37.07 |
| CDX79566 | Canola | cytosol | 27.2 | 36.97 |
| CDY17260 | Canola | cytosol | 27.4 | 36.55 |
| CDX84306 | Canola | cytosol | 27.2 | 36.01 |
| CDX93578 | Canola | cytosol | 29.94 | 35.58 |
| CDX95077 | Canola | cytosol | 29.94 | 35.5 |
| CDY31186 | Canola | cytosol | 29.94 | 35.25 |
| CDX83275 | Canola | cytosol | 29.55 | 34.87 |
| CDX71438 | Canola | cytosol | 29.16 | 34.73 |
| CDY04504 | Canola | cytosol | 29.35 | 34.72 |
| CDY38752 | Canola | endoplasmic reticulum | 22.5 | 29.79 |
| CDY38662 | Canola | cytosol | 29.55 | 29.26 |
| CDY37590 | Canola | cytosol | 29.16 | 29.16 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 22.11 | 29.05 |
| CDY14372 | Canola | endoplasmic reticulum | 22.5 | 28.97 |
| CDX79393 | Canola | cytosol | 29.94 | 28.92 |
| CDY57698 | Canola | cytosol | 29.94 | 28.81 |
| CDY20251 | Canola | endoplasmic reticulum | 22.5 | 28.61 |
| CDY55344 | Canola | endoplasmic reticulum | 21.92 | 28.57 |
| CDY30236 | Canola | endoplasmic reticulum | 21.92 | 28.57 |
| CDY24618 | Canola | endoplasmic reticulum | 15.66 | 28.47 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 21.72 | 28.39 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 21.72 | 28.39 |
| CDY19035 | Canola | endoplasmic reticulum | 21.72 | 28.32 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 21.72 | 28.32 |
| CDY28494 | Canola | plastid | 34.05 | 26.85 |
| CDY34176 | Canola | plastid | 33.86 | 26.7 |
| CDX92656 | Canola | cytosol | 19.96 | 23.67 |
| CDX96166 | Canola | cytosol | 25.05 | 18.85 |
| CDY49165 | Canola | extracellular, plasma membrane | 26.22 | 17.16 |
| CDY56163 | Canola | extracellular, vacuole | 27.01 | 17.14 |
| CDY38192 | Canola | plasma membrane | 27.79 | 17.09 |
| CDY08360 | Canola | endoplasmic reticulum | 27.79 | 17.09 |
| CDY51824 | Canola | extracellular, plasma membrane | 26.81 | 17.0 |
| CDY19639 | Canola | extracellular, vacuole | 26.61 | 16.94 |
| CDY45052 | Canola | mitochondrion | 28.77 | 14.71 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 28.57 | 14.61 |
| CDY33415 | Canola | cytosol, mitochondrion | 28.18 | 14.17 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 28.18 | 13.83 |
| CDX89214 | Canola | extracellular, plasma membrane | 19.96 | 13.46 |
| CDX91317 | Canola | plastid | 27.59 | 13.33 |
| CDY32485 | Canola | plastid | 28.38 | 13.16 |
| CDX90936 | Canola | plastid | 27.2 | 12.71 |
| CDX89933 | Canola | plastid | 28.38 | 12.54 |
| CDX97266 | Canola | plastid | 27.4 | 12.38 |
| CDY18129 | Canola | cytosol, plastid | 28.96 | 12.19 |
| CDY50381 | Canola | plastid | 28.38 | 12.07 |
| CDY22053 | Canola | plastid | 28.96 | 12.04 |
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.44 | 11.98 |
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.44 | 11.93 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 16.63 | 11.84 |
| CDY18018 | Canola | plastid | 27.79 | 11.64 |
| CDX89934 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:50.3.6 | GO:A0A078HH76 | UniProt:A0A078HH76 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlants:CDY37046 | ProteinID:CDY37046 | ProteinID:CDY37046.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00063255001 | InterPro:MIT | InterPro:P-loop_NTPase |
| PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF86 | SMART:SM00382 | SMART:SM00745 |
| SUPFAM:SSF52540 | UniParc:UPI0004EEE358 | SEG:seg | : | : | : |
Description
BnaA04g26240DBnaA04g26240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH76]
Coordinates
chrLK032390:-:200320..203363
Molecular Weight (calculated)
56664.5 Da
IEP (calculated)
9.550
GRAVY (calculated)
-0.445
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MVISNSFDYF DSSRTMNSIS EQNMVNMSFL RGIIDSFSSI FTEEEEHSNH RHEISKHDPT VPTSSSSMNG VDGAVTVTNE RVAYKLKGYF DLAKEEISKG
101: VRAEEWGLHD DALLHYRYAQ RIMNEASSTP SPSYITSSEK EKVRLYREKI SKWQSQVSGR LQALGKRTGV GMSENKRAVP SPSLASVPSS NRRVSLPRTS
201: LPRGGTGVAR SPKDATTTNP KPAKEAGGGY DDKLVEMINT TIVDRSPSVK WDDVAGLDGA KQALMEMVIL PAKRRDLFTG LRRPARGLLL FGPPGNGKTM
301: LAKAVASESQ ATFFNVSASS LTSKWVGEAE KLVKTLFQVA ISRQPSVIFM DEIDSIMSTR SISENEASRR LKSEFLIQFD GVTSNPDDLV IVIGATNKPQ
401: ELDDAVLRRL VKRIYVPLPD PNVRKLLFKT KLKCQPHSLS GYSGSDLQAL CEEAAMMPIR ELGADILTIQ ANKVRPLSYD DFRKSMGVIR PSLSKSKWEE
501: LEHWNSEFGS N
101: VRAEEWGLHD DALLHYRYAQ RIMNEASSTP SPSYITSSEK EKVRLYREKI SKWQSQVSGR LQALGKRTGV GMSENKRAVP SPSLASVPSS NRRVSLPRTS
201: LPRGGTGVAR SPKDATTTNP KPAKEAGGGY DDKLVEMINT TIVDRSPSVK WDDVAGLDGA KQALMEMVIL PAKRRDLFTG LRRPARGLLL FGPPGNGKTM
301: LAKAVASESQ ATFFNVSASS LTSKWVGEAE KLVKTLFQVA ISRQPSVIFM DEIDSIMSTR SISENEASRR LKSEFLIQFD GVTSNPDDLV IVIGATNKPQ
401: ELDDAVLRRL VKRIYVPLPD PNVRKLLFKT KLKCQPHSLS GYSGSDLQAL CEEAAMMPIR ELGADILTIQ ANKVRPLSYD DFRKSMGVIR PSLSKSKWEE
501: LEHWNSEFGS N
001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N
Arabidopsis Description
AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.