CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22053	Canola	plastid	95.42	93.25
CDX90936	Canola	plastid	84.68	92.96
Bra036265.1-P	Field mustard	plastid	97.34	90.62
CDX91317	Canola	plastid	77.85	88.37
Os11t0661400-01	Rice	cytosol	17.07	85.06
CDY18018	Canola	plastid	84.85	83.52
CDX97266	Canola	plastid	77.6	82.41
AT4G02480.1	Thale cress	plastid	86.68	82.29
Zm00001d029385_P001	Maize	cytosol	12.74	80.1
CDY18129	Canola	cytosol, plastid	73.52	72.73
CDY32485	Canola	plastid	66.19	72.14
Zm00001d049686_P001	Maize	plastid	14.32	71.97
CDX89933	Canola	plastid	68.86	71.54
TraesCS1B01G120800.1	Wheat	cytosol	13.66	64.82
GSMUA_Achr11P...	Banana	cytosol	37.97	64.68
KRH71559	Soybean	cytosol	58.03	63.02
KRH31896	Soybean	nucleus	61.78	60.52
Solyc09g074950.2.1	Tomato	plastid	62.2	60.39
KRH71560	Soybean	nucleus	62.03	59.94
GSMUA_Achr8P33760_001	Banana	cytosol	54.87	59.69
KRH31895	Soybean	nucleus	61.87	59.58
HORVU7Hr1G026880.14	Barley	cytosol	23.06	59.57
VIT_07s0005g00200.t01	Wine grape	plastid	63.78	59.52
Os03t0344700-01	Rice	cytosol	38.38	59.48
Solyc06g084530.2.1	Tomato	extracellular, nucleus	61.7	59.23
GSMUA_Achr11P...	Banana	cytosol	41.8	55.84
GSMUA_Achr3P00740_001	Banana	mitochondrion	52.96	55.45
GSMUA_Achr8P10090_001	Banana	cytosol	49.54	54.74
HORVU2Hr1G019730.5	Barley	cytosol, plastid	46.71	53.43
EES16128	Sorghum	cytosol, plastid	41.13	53.0
CDX92656	Canola	cytosol	18.98	52.9
Zm00001d007139_P007	Maize	cytosol, plastid	46.05	52.32
KXG29076	Sorghum	plastid	53.79	52.31
TraesCS2A01G113900.1	Wheat	cytosol	47.88	52.23
Os07t0672500-02	Rice	cytosol, plastid	46.79	51.99
TraesCS7B01G028300.1	Wheat	cytosol	34.14	51.96
TraesCS2B01G132900.3	Wheat	cytosol, plastid	47.54	51.91
OQU90457	Sorghum	cytosol, plastid	47.04	51.65
TraesCS4A01G169300.15	Wheat	plastid	52.54	51.18
Zm00001d007698_P002	Maize	plastid	53.87	51.11
TraesCS4D01G145100.12	Wheat	plastid	51.96	50.81
TraesCS2D01G114500.1	Wheat	cytosol, plastid	47.96	50.79
Zm00001d048689_P004	Maize	plastid	52.62	50.4
TraesCS4B01G126300.7	Wheat	nucleus	52.79	50.4
EER92288	Sorghum	cytosol	46.29	50.09
TraesCS4A01G142800.3	Wheat	cytosol	45.21	49.41
TraesCS4B01G155600.1	Wheat	cytosol	45.21	49.36
Zm00001d029120_P004	Maize	cytosol	46.21	49.29
TraesCS4D01G168600.1	Wheat	cytosol	45.3	49.14
HORVU4Hr1G033300.1	Barley	cytosol	52.71	48.88
Zm00001d047494_P007	Maize	cytosol	44.8	48.64
TraesCS7D01G127200.1	Wheat	cytosol	39.13	47.57
HORVU4Hr1G046420.6	Barley	cytosol, plastid	45.63	47.45
TraesCS7A01G128400.2	Wheat	cytosol, plastid	39.38	46.65
CDY24618	Canola	endoplasmic reticulum	10.66	45.55
OQU79278	Sorghum	cytosol, plastid	34.22	44.58
CDY71574	Canola	endoplasmic reticulum, plasma membrane	14.07	43.11
CDX92836	Canola	endoplasmic reticulum, plasma membrane	13.99	42.97
CDY29857	Canola	endoplasmic reticulum, plasma membrane	13.99	42.97
CDY19035	Canola	endoplasmic reticulum	13.91	42.6
CDY30236	Canola	endoplasmic reticulum	13.91	42.6
CDY55344	Canola	endoplasmic reticulum	13.91	42.6
CDY14372	Canola	endoplasmic reticulum	13.82	41.81
CDY38752	Canola	endoplasmic reticulum	13.32	41.45
CDY20251	Canola	endoplasmic reticulum	13.74	41.04
CDY56163	Canola	extracellular, vacuole	27.14	40.5
CDY49165	Canola	extracellular, plasma membrane	26.23	40.33
CDY51824	Canola	extracellular, plasma membrane	27.06	40.32
CDY19639	Canola	extracellular, vacuole	26.73	39.98
CDY47077	Canola	endoplasmic reticulum, plasma membrane	12.91	39.85
CDY08360	Canola	endoplasmic reticulum	27.48	39.71
CDY38192	Canola	plasma membrane	27.48	39.71
CDX96166	Canola	cytosol	21.65	38.29
CDX89214	Canola	extracellular, plasma membrane	22.81	36.15
CDY18925	Canola	plastid	10.66	35.36
CDX84641	Canola	cytosol	10.99	35.2
CDX79566	Canola	cytosol	10.91	34.84
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.4	34.8
CDY17260	Canola	cytosol	11.07	34.73
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.23	34.66
CDX84306	Canola	cytosol	11.07	34.46
CDY19014	Canola	endoplasmic reticulum, extracellular	20.57	34.4
CDY45052	Canola	mitochondrion	26.31	31.63
CDY03591	Canola	cytosol, mitochondrion, plastid	26.23	31.53
CDY33415	Canola	cytosol, mitochondrion	26.48	31.3
CDX74745	Canola	cytosol	12.32	31.16
CDY42204	Canola	cytosol, mitochondrion, plastid	26.56	30.64
CDX95077	Canola	cytosol	10.24	28.54
CDY37046	Canola	cytosol	12.07	28.38
CDX93578	Canola	cytosol	10.16	28.37
CDY31186	Canola	cytosol	10.07	27.88
CDY37590	Canola	cytosol	11.82	27.79
CDX71438	Canola	cytosol	9.91	27.74
CDY38662	Canola	cytosol	11.91	27.71
CDY04504	Canola	cytosol	9.91	27.55
CDX83275	Canola	cytosol	9.91	27.48
CDX79393	Canola	cytosol	12.07	27.41
CDY57698	Canola	cytosol	12.07	27.31
CDY28494	Canola	plastid	14.24	26.39
CDY34176	Canola	plastid	14.24	26.39
CDY27380	Canola	nucleus	12.32	19.95
CDX89934	Canola	cytosol	0.33	1.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078IK57	UniProt:A0A078IK57
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY50381	ProteinID:CDY50381	ProteinID:CDY50381.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00096600001
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF138	SMART:SM00382
InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879	SUPFAM:SSF52540	UniParc:UPI0004EDCA52	SEG:seg	:

Description

BnaCnng19130DBnaCnng19130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK57]

Coordinates

chrLK032905:+:18983..25863

Molecular Weight (calculated)

129956.0 Da

IEP (calculated)

5.363

GRAVY (calculated)

-0.379

Length

1201 amino acids

Sequence
(BLAST)

0001: MVETRSSSSA SKRFCSSSSP EPSASSPRPS KRSKVKIDAA STAIESASAS AAAEPAGSSS ASEVPIENQG PGSDPGSESG EPELRSSDPQ QGVDAAEKPV
0101: VLTDVPLREA SPEIDANPEV DVLATPTVAE EVVADGEKSK AGKKRAKAPW AKLLSQYPQN PHRIMRGPVF TVGRRGCDLS IKDQSMPSTL CELKQAENGG
0201: PSVATLEITG NGVLVQVNGK CYQKGALVHL RGGDEVIFNI SGRHAYIFQP LKDENQAAPD RASSQILFET RGGRVHSETR AGESSAVDGA SILASLSKYR
0301: NLHLRPPIAK SAKRQQNPEV PQEPPSCNDC ISDTDMNDAD SNNDHAAIAS VEKTAASTSY TANENLNADG SGLDPFQEAD GGNPPTSGYE IRPILRLLGE
0401: SSSLDIRGIS KLLDERREVR ELLKEFDISS TISTRRQAFK DSLRGGVLIA QNIDVSLDSF PYFLSATTKD VLIASMYVHM KGGSKFAKYA SDLPTTSPRI
0501: LLSGPAGSEI YQEMLAKALA KNFGAKLMIV DSLLLPGGSP AREAESSKEG DRVKFLGPSS SAISSLQGPP LRGPTIGFQG KVVLAFEDNA SSKIGIRFDR
0601: PVPDGNDLGG LCEEDHGFFC AASSLRLDGS SGDDADKLAI NEIFEVAHSE AEGGSLILFL KDIEKSLVGN SDVYATLKSK LENLPDNIVV LASQTQLDTR
0701: KEKAHPGGFL FTKFGGNQTA LLDLAFPDNF SKLHDRSKET PKSMKQITRL FPNKVAIQLP QAEALLSDWK EKLDRDTELL KVQANITSIL GVLTKNRLDC
0801: PDLGTLSIKD QTLLPESVEK VVGWALSHHL MNCAEPTVKD NKLVISAESI TYGLQMLHGV QDENKSLKKS LKDVVTENEF EKKLLSDVIP PSDIGVSFDD
0901: IGALENVKDT LKELVMLPLQ RPELFDKGQL TKPTKGILLF GPPGTGKTML AKAVATEAGA NFINISMSSI TSKWFGEGEK YVKAVFSLAS KIAPSVIFVD
1001: EVDSMLGRRE NPGEHEAMRK MKNEFMINWD GLRTKDRERV LVLAATNRPF DLDEAVIRRL PRRLMVNLPD ATNRSKILSV ILAKEEIGPD VDLEAIANMT
1101: DGYSGSDLKN LCVTAAHLPI REILEKEKKE KTAAEAENRP TPPLYSCTDI RPLTMTDFKA AHEQVCASVS TDSSNMNELQ QWNELYGEGG SRKKTSLSYF
1201: M

Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)

0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.