Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89214 | Canola | extracellular, plasma membrane | 96.8 | 91.69 |
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 88.72 | 90.48 |
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 88.16 | 90.3 |
| AT4G28000.2 | Thale cress | extracellular | 89.55 | 77.28 |
| CDY19639 | Canola | extracellular, vacuole | 77.86 | 69.61 |
| CDY51824 | Canola | extracellular, plasma membrane | 77.99 | 69.48 |
| CDY56163 | Canola | extracellular, vacuole | 77.72 | 69.32 |
| CDY49165 | Canola | extracellular, plasma membrane | 73.68 | 67.73 |
| KRH38312 | Soybean | endoplasmic reticulum | 66.3 | 58.26 |
| KRH08780 | Soybean | extracellular, plasma membrane | 65.46 | 57.53 |
| Solyc03g007760.2.1 | Tomato | endoplasmic reticulum | 66.16 | 57.51 |
| PGSC0003DMT400051401 | Potato | endoplasmic reticulum | 66.02 | 57.11 |
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 66.16 | 56.75 |
| CDY38192 | Canola | plasma membrane | 63.51 | 54.87 |
| CDY08360 | Canola | endoplasmic reticulum | 63.51 | 54.87 |
| CDX96166 | Canola | cytosol | 50.14 | 53.02 |
| TraesCS3D01G159200.1 | Wheat | cytosol, vacuole | 60.31 | 51.79 |
| Os01t0226400-01 | Rice | plasma membrane | 60.59 | 51.79 |
| HORVU3Hr1G030770.20 | Barley | cytosol, vacuole | 60.59 | 51.72 |
| TraesCS3A01G151300.2 | Wheat | cytosol, vacuole | 60.31 | 51.55 |
| TraesCS3B01G178200.1 | Wheat | cytosol, vacuole | 60.17 | 51.43 |
| Zm00001d008983_P001 | Maize | vacuole | 60.03 | 50.95 |
| Zm00001d039315_P003 | Maize | vacuole | 59.33 | 50.65 |
| EES00021 | Sorghum | endoplasmic reticulum | 59.33 | 50.3 |
| GSMUA_Achr9P05420_001 | Banana | cytosol, mitochondrion | 44.43 | 48.93 |
| KRH08789 | Soybean | cytosol | 21.03 | 45.07 |
| KRH08796 | Soybean | cytosol | 10.72 | 44.25 |
| CDX92656 | Canola | cytosol | 17.55 | 29.23 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 12.53 | 23.02 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 12.53 | 23.02 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 12.53 | 22.96 |
| CDY38752 | Canola | endoplasmic reticulum | 12.26 | 22.8 |
| CDX91317 | Canola | plastid | 33.57 | 22.78 |
| CDY19035 | Canola | endoplasmic reticulum | 12.26 | 22.45 |
| CDX90936 | Canola | plastid | 33.98 | 22.3 |
| CDY55344 | Canola | endoplasmic reticulum | 12.12 | 22.19 |
| CDY30236 | Canola | endoplasmic reticulum | 12.12 | 22.19 |
| CDY32485 | Canola | plastid | 33.7 | 21.96 |
| CDX84306 | Canola | cytosol | 11.56 | 21.5 |
| CDY17260 | Canola | cytosol | 11.42 | 21.41 |
| CDX97266 | Canola | plastid | 33.7 | 21.4 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 11.56 | 21.34 |
| CDX84641 | Canola | cytosol | 11.0 | 21.07 |
| CDX89933 | Canola | plastid | 33.43 | 20.76 |
| CDX79566 | Canola | cytosol | 10.86 | 20.74 |
| CDY14372 | Canola | endoplasmic reticulum | 11.42 | 20.65 |
| CDY50381 | Canola | plastid | 34.4 | 20.57 |
| CDY22053 | Canola | plastid | 34.96 | 20.42 |
| CDY20251 | Canola | endoplasmic reticulum | 11.42 | 20.4 |
| CDY18018 | Canola | plastid | 34.4 | 20.25 |
| CDY18129 | Canola | cytosol, plastid | 33.84 | 20.02 |
| CDY18925 | Canola | plastid | 10.03 | 19.89 |
| CDY45052 | Canola | mitochondrion | 27.02 | 19.42 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 27.02 | 19.42 |
| CDY33415 | Canola | cytosol, mitochondrion | 26.18 | 18.5 |
| CDX74745 | Canola | cytosol | 11.98 | 18.11 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 26.18 | 18.06 |
| CDY24618 | Canola | endoplasmic reticulum | 6.96 | 17.79 |
| CDX95077 | Canola | cytosol | 10.45 | 17.4 |
| CDX93578 | Canola | cytosol | 10.31 | 17.21 |
| CDY04504 | Canola | cytosol | 10.17 | 16.9 |
| CDX83275 | Canola | cytosol | 10.17 | 16.86 |
| CDY31186 | Canola | cytosol | 10.17 | 16.82 |
| CDX71438 | Canola | cytosol | 10.03 | 16.78 |
| CDY37046 | Canola | cytosol | 11.84 | 16.63 |
| CDY28494 | Canola | plastid | 14.9 | 16.51 |
| CDY38662 | Canola | cytosol | 11.84 | 16.47 |
| CDX79393 | Canola | cytosol | 12.12 | 16.45 |
| CDY34176 | Canola | plastid | 14.76 | 16.36 |
| CDY37590 | Canola | cytosol | 11.56 | 16.24 |
| CDY57698 | Canola | cytosol | 11.98 | 16.2 |
| CDY27380 | Canola | nucleus | 12.12 | 11.73 |
| CDX89934 | Canola | cytosol | 0.56 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.2 | GO:A0A078G0M2 | UniProt:A0A078G0M2 | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | EnsemblPlants:CDY19014 | ProteinID:CDY19014 | ProteinID:CDY19014.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00006259001 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF98 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EF3C7A |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g20540DBnaC01g20540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0M2]
Coordinates
chrLK032091:-:289534..293656
Molecular Weight (calculated)
80293.5 Da
IEP (calculated)
5.467
GRAVY (calculated)
-0.466
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQKSVLFSA LGVGVGLGLG LASGQGLGKW ANGSVAAEDE LTGEKIEQEL VRQIVDGRES SVTFDEFPYF LSEKTRLLLT SAAYVHLKQF DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKMQSKYGCI KKEPCHKRSI SEMTLDKMSN LMESFSMLTQ REETRGTLRR LTSGNDLTSR
201: GFEGSSHPNR LKRNASAASD ISSISSRSAS SVSASSKRST NLCFDEKLFL QSLYKVLVSV SETNPIIIYL RDVEKLIQSE RFYTLFQRLL TKLSGPVLLL
301: VSRLLEPEDD CQEVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSICHA DTIFLSSHIE EIVVSAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GSRYPEGSLK LDRNTDSKGE EGEEIVKSES KSETVPENKN DLERSIPAAK NECPLPPKAP VNEVAPDNEF
501: EKRIRPEMKP KNHFKSLGIL LFGPPGTGKT MMAKAIANEA GASDKILVLA ATNRPFDLDE AIIRRFERRI MVGLPSVESR EKILRTLLSK EKTENLDFHE
601: LAQMTDGYSG SDLKNFCTTA AYRPVRELIK QECLKDQERK KRDEAEKSSE ESSEEKEEAS EERVITLRAL SMEDMGVAKS QVAASFAAKG AGMNELKQWN
701: DLYGEGGSRK KEQLSYFL
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKMQSKYGCI KKEPCHKRSI SEMTLDKMSN LMESFSMLTQ REETRGTLRR LTSGNDLTSR
201: GFEGSSHPNR LKRNASAASD ISSISSRSAS SVSASSKRST NLCFDEKLFL QSLYKVLVSV SETNPIIIYL RDVEKLIQSE RFYTLFQRLL TKLSGPVLLL
301: VSRLLEPEDD CQEVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSICHA DTIFLSSHIE EIVVSAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GSRYPEGSLK LDRNTDSKGE EGEEIVKSES KSETVPENKN DLERSIPAAK NECPLPPKAP VNEVAPDNEF
501: EKRIRPEMKP KNHFKSLGIL LFGPPGTGKT MMAKAIANEA GASDKILVLA ATNRPFDLDE AIIRRFERRI MVGLPSVESR EKILRTLLSK EKTENLDFHE
601: LAQMTDGYSG SDLKNFCTTA AYRPVRELIK QECLKDQERK KRDEAEKSSE ESSEEKEEAS EERVITLRAL SMEDMGVAKS QVAASFAAKG AGMNELKQWN
701: DLYGEGGSRK KEQLSYFL
001: MLLSALGVGV GVGVGLGLAS GQAVGKWAGG NSSSNNAVTA DKMEKEILRQ VVDGRESKIT FDEFPYYLSE QTRVLLTSAA YVHLKHFDAS KYTRNLSPAS
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL
Arabidopsis Description
p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.