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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47077 Canola endoplasmic reticulum, plasma membrane 94.82 94.09
CDY14372 Canola endoplasmic reticulum 84.72 82.37
CDY20251 Canola endoplasmic reticulum 84.2 80.85
CDY71574 Canola endoplasmic reticulum, plasma membrane 78.76 77.55
CDY29857 Canola endoplasmic reticulum, plasma membrane 78.24 77.24
CDX92836 Canola endoplasmic reticulum, plasma membrane 77.98 76.98
AT5G53540.1 Thale cress endoplasmic reticulum 79.79 76.43
CDY19035 Canola endoplasmic reticulum 76.17 75.0
CDY30236 Canola endoplasmic reticulum 76.17 75.0
CDY55344 Canola endoplasmic reticulum 76.17 75.0
Solyc03g082630.2.1 Tomato endoplasmic reticulum 70.73 72.41
KRH53570 Soybean endoplasmic reticulum, plasma membrane 73.06 71.94
PGSC0003DMT400047633 Potato endoplasmic reticulum 70.21 71.69
KRH64362 Soybean endoplasmic reticulum, plasma membrane 72.28 71.17
Solyc06g053160.2.1 Tomato endoplasmic reticulum, plasma membrane 71.5 70.41
PGSC0003DMT400013963 Potato endoplasmic reticulum 71.24 70.15
KRH15897 Soybean endoplasmic reticulum 70.21 69.49
TraesCS7B01G287800.1 Wheat golgi 65.8 68.1
TraesCS7D01G381400.1 Wheat endoplasmic reticulum 65.54 68.01
TraesCS7A01G384900.1 Wheat endoplasmic reticulum 65.28 67.56
KXG20883 Sorghum endoplasmic reticulum 68.39 67.52
Os06t0714500-01 Rice plasma membrane 68.65 67.43
GSMUA_Achr11P... Banana endoplasmic reticulum 67.36 67.01
Zm00001d014775_P002 Maize plastid 67.88 67.01
HORVU0Hr1G021880.1 Barley endoplasmic reticulum 68.13 66.75
GSMUA_Achr4P05220_001 Banana endoplasmic reticulum 66.06 65.72
HORVU7Hr1G091480.2 Barley plastid 66.58 59.49
Zm00001d036410_P002 Maize plastid 68.13 55.25
VIT_16s0098g01260.t01 Wine grape endoplasmic reticulum 69.43 34.72
CDY24618 Canola endoplasmic reticulum 22.8 31.32
CDY18925 Canola plastid 29.27 31.22
CDX84641 Canola cytosol 27.72 28.53
CDY17260 Canola cytosol 27.72 27.94
CDX79566 Canola cytosol 27.2 27.93
CDX84306 Canola cytosol 27.72 27.72
CDX92656 Canola cytosol 29.53 26.45
CDX93578 Canola cytosol 29.27 26.28
CDX95077 Canola cytosol 29.27 26.22
CDX71438 Canola cytosol 28.76 25.87
CDY04504 Canola cytosol 28.76 25.69
CDY31186 Canola cytosol 28.76 25.58
CDX83275 Canola cytosol 28.5 25.4
CDX74745 Canola cytosol 29.79 24.21
CDY37046 Canola cytosol 29.79 22.5
CDX96166 Canola cytosol 38.34 21.8
CDY37590 Canola cytosol 27.2 20.55
CDY38662 Canola cytosol 27.2 20.35
CDX79393 Canola cytosol 27.72 20.23
CDY57698 Canola cytosol 27.72 20.15
CDY49165 Canola extracellular, plasma membrane 40.41 19.97
CDY19639 Canola extracellular, vacuole 40.16 19.3
CDY56163 Canola extracellular, vacuole 40.16 19.25
CDY51824 Canola extracellular, plasma membrane 40.16 19.23
CDY08360 Canola endoplasmic reticulum 40.41 18.77
CDY38192 Canola plasma membrane 40.41 18.77
CDY34176 Canola plastid 31.09 18.52
CDY28494 Canola plastid 30.83 18.36
CDY27380 Canola nucleus 29.53 15.36
CDX89214 Canola extracellular, plasma membrane 29.27 14.91
CDX91317 Canola plastid 40.67 14.84
CDX90936 Canola plastid 41.19 14.53
CDY45052 Canola mitochondrion 37.05 14.31
CDY32485 Canola plastid 40.67 14.25
CDY03591 Canola cytosol, mitochondrion, plastid 36.79 14.21
CDY33415 Canola cytosol, mitochondrion 37.31 14.17
CDX97266 Canola plastid 40.67 13.88
CDY42204 Canola cytosol, mitochondrion, plastid 37.05 13.74
CDX89933 Canola plastid 40.93 13.67
CDY50381 Canola plastid 41.45 13.32
CDY22053 Canola plastid 41.71 13.1
CDY18018 Canola plastid 41.19 13.03
CDY18129 Canola cytosol, plastid 40.93 13.01
CDY29873 Canola endoplasmic reticulum, extracellular, plasma membrane 22.54 12.41
CDY19014 Canola endoplasmic reticulum, extracellular 22.8 12.26
CDX92857 Canola endoplasmic reticulum, extracellular, plasma membrane 22.28 12.22
CDX89934 Canola cytosol 0.26 0.38
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1GO:A0A078HLJ6UniProt:A0A078HLJ6InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDY38752ProteinID:CDY38752ProteinID:CDY38752.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00066544001InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674PANTHER:PTHR23074PANTHER:PTHR23074:SF20
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EC756C::
Description
BnaC03g14970DBnaC03g14970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLJ6]
Coordinates
chrLK032431:-:324852..326495
Molecular Weight (calculated)
42963.2 Da
IEP (calculated)
9.387
GRAVY (calculated)
-0.209
Length
386 amino acids
Sequence
(BLAST)
001: MKTSSRKRDS SFLEQLILYV AGAALASLSL YVCARHSDPN RDASDKALKR KREIAKRLGR PLIQTNQYED VIAGDVINSR KIDVEFDSIG GLESKKQSLY
101: ELVILPLKRP ELFAYGKLLG PQKGVLLYGP PGTGKTMLAK AIAKESGAVF INVRVSNLMS KWFGDAQKLV AAVFSLAEKL QPAIVFIDEV DSFLGQRRST
201: GNEAMAIMKT EFMALWDGVA TDKNARVMVL GATNRPSELD EAILRRFAQA FEIGMPDCKE RAEILRVVLK GERVEEGIDF DLVARLCEDY TGSDIFELCK
301: KAAYLPIREI LEEERKGRKI PVPRALTQMD LEKVLATSKK TQVAASEYSD SRLQGSVWRR PKDSDEVQAV INGISRLLVS GMINQQ
Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.