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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
TargetP:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G021880.1 Barley endoplasmic reticulum 88.19 96.7
TraesCS7D01G381400.1 Wheat endoplasmic reticulum 80.32 93.28
TraesCS7B01G287800.1 Wheat golgi 80.32 93.03
TraesCS7A01G384900.1 Wheat endoplasmic reticulum 79.86 92.49
Os06t0714500-01 Rice plasma membrane 79.86 87.79
KXG20883 Sorghum endoplasmic reticulum 78.01 86.19
Zm00001d014775_P002 Maize plastid 77.31 85.42
GSMUA_Achr4P05220_001 Banana endoplasmic reticulum 72.22 80.41
GSMUA_Achr11P... Banana endoplasmic reticulum 71.76 79.9
PGSC0003DMT400047633 Potato endoplasmic reticulum 63.89 73.02
Solyc03g082630.2.1 Tomato endoplasmic reticulum 63.66 72.94
KRH64362 Soybean endoplasmic reticulum, plasma membrane 65.97 72.7
Solyc06g053160.2.1 Tomato endoplasmic reticulum, plasma membrane 65.28 71.94
PGSC0003DMT400013963 Potato endoplasmic reticulum 64.81 71.43
KRH53570 Soybean endoplasmic reticulum, plasma membrane 64.81 71.43
Zm00001d036410_P002 Maize plastid 78.47 71.22
CDY30236 Canola endoplasmic reticulum 64.35 70.92
CDY55344 Canola endoplasmic reticulum 64.35 70.92
Bra026316.1-P Field mustard endoplasmic reticulum 64.35 70.92
AT4G27680.1 Thale cress endoplasmic reticulum, plasma membrane 65.28 70.85
Bra019030.1-P Field mustard endoplasmic reticulum, plasma membrane 64.12 70.66
KRH15897 Soybean endoplasmic reticulum 63.66 70.51
CDY71574 Canola endoplasmic reticulum, plasma membrane 63.89 70.41
CDY29857 Canola endoplasmic reticulum, plasma membrane 63.66 70.33
CDX92836 Canola endoplasmic reticulum, plasma membrane 63.66 70.33
CDY19035 Canola endoplasmic reticulum 63.66 70.15
PGSC0003DMT400031598 Potato endoplasmic reticulum 57.41 69.08
CDY14372 Canola endoplasmic reticulum 63.19 68.77
AT5G53540.1 Thale cress endoplasmic reticulum 64.12 68.73
Bra003048.1-P Field mustard endoplasmic reticulum 62.96 68.51
CDY20251 Canola endoplasmic reticulum 63.43 68.16
Solyc08g083020.2.1 Tomato plastid 55.56 66.85
CDY38752 Canola endoplasmic reticulum 59.49 66.58
CDY47077 Canola endoplasmic reticulum, plasma membrane 57.87 64.27
Bra029063.1-P Field mustard endoplasmic reticulum 57.64 63.68
VIT_16s0098g01260.t01 Wine grape endoplasmic reticulum 64.35 36.01
HORVU6Hr1G038660.1 Barley cytosol, mitochondrion 12.96 31.46
HORVU3Hr1G072910.6 Barley cytosol 26.62 30.59
HORVU4Hr1G059020.1 Barley cytosol, endoplasmic reticulum 16.9 30.29
HORVU7Hr1G026880.14 Barley cytosol 31.94 29.68
HORVU4Hr1G059040.2 Barley cytosol 17.13 29.37
HORVU3Hr1G072480.2 Barley cytosol 17.13 29.37
HORVU5Hr1G104980.1 Barley endoplasmic reticulum, mitochondrion 18.06 27.27
HORVU3Hr1G061800.1 Barley cytosol, plastid 25.0 23.23
HORVU3Hr1G063300.1 Barley cytosol 25.23 20.92
HORVU7Hr1G013190.8 Barley plastid 26.39 20.39
HORVU3Hr1G010300.1 Barley cytosol, plastid 23.38 19.27
HORVU3Hr1G055830.5 Barley cytosol 33.56 17.95
HORVU1Hr1G092440.13 Barley cytosol, golgi, mitochondrion, plastid 35.88 17.88
HORVU3Hr1G030770.20 Barley cytosol, vacuole 34.03 17.48
HORVU5Hr1G029910.10 Barley cytosol, mitochondrion, nucleus 26.39 15.99
HORVU2Hr1G019730.5 Barley cytosol, plastid 38.66 15.9
HORVU6Hr1G075440.6 Barley mitochondrion 34.26 15.01
HORVU4Hr1G046420.6 Barley cytosol, plastid 38.19 14.29
HORVU7Hr1G037870.1 Barley plastid 33.1 13.76
HORVU4Hr1G033300.1 Barley cytosol 37.04 12.36
Protein Annotations
EnsemblPlants:HORVU7Hr1G091480.2EnsemblPlantsGene:HORVU7Hr1G091480Gene3D:1.10.8.60Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreInterPro:P-loop_NTPase
PANTHER:PTHR23074PANTHER:PTHR23074:SF20PFAM:PF00004ScanProsite:PS00674SEG:segSMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixMapMan:35.1:::
Description
No Description!
Coordinates
chrchr7H:+:559672355..559677456
Molecular Weight (calculated)
47099.5 Da
IEP (calculated)
9.717
GRAVY (calculated)
-0.371
Length
432 amino acids
Sequence
(BLAST)
001: XPPFLHGRIQ PPSPTHLAPA RPPFPFPRKQ RRAERGRRGI GGRRRRXXXX XXXLYAASAA LSCLVLFAGL RQLDPNRESS KKALQQKKEI AKRLGRPLIS
101: TTPYEDVIAC DVINPDEIDV EFESVGGLDE VKQALYELVI LPLRRPELFA YGKLLSPQKG VLLYGPPGTG KTMLAKAIAK ESGAVFINVR ISNLMSKWFG
201: DAQKLVSAVF SLANKLQPAI IFIDEVDSFL GQRRNTDHEA LTNMKTEFMS LWDGFTTDQN ARVMVLAATN RPSELDEAIL RRFTQIFEIG VPSRSERSKI
301: LQVILKGENV ESNIDYDYIA SLCEGFTGSD ILELCKQAAF YPIREILNSE KDGTRANSPR ALRQSDLEKA LSTSRKGKKA ASGAASGFQS PVWTRPSDPE
401: DDQVQSAIFE ISKLMSRIVQ NSQSEPQEPS SP
Best Arabidopsis Sequence Match ( AT4G27680.1 )
(BLAST)
001: MGGSSETKIL QELILYAASA AFSCLVLFAG LRHLDPNREA SKKALEHKKE ISKRLGRPLV QTNPYEDVIA CDVINPDHID VEFGSIGGLE TIKQALYELV
101: ILPLKRPELF AYGKLLGPQK GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA IIFIDEVESF LGQRRSTDHE
201: AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA
301: YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR
Arabidopsis Description
26S proteasome regulatory particle chain RPT6-like protein [Source:UniProtKB/TrEMBL;Acc:Q9T090]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.