Factsheet for HORVU5Hr1G029910.10

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G123800.1	Wheat	nucleus	79.38	82.27
TraesCS5A01G109500.1	Wheat	nucleus	78.96	81.83
TraesCS5B01G110300.1	Wheat	nucleus	78.68	81.54
Zm00001d041083_P005	Maize	nucleus	66.48	69.91
KXG23422	Sorghum	nucleus	66.48	68.9
GSMUA_Achr6P27610_001	Banana	cytosol	57.36	62.44
VIT_14s0068g02130.t01	Wine grape	nucleus	56.24	60.03
KRH57680	Soybean	nucleus	55.26	59.79
KRG94255	Soybean	nucleus	54.84	59.33
Bra032982.1-P	Field mustard	plastid	53.16	58.49
CDY28494	Canola	plastid	53.16	58.49
CDY34176	Canola	plastid	53.02	58.33
AT3G27120.1	Thale cress	nucleus	52.59	55.15
PGSC0003DMT400052226	Potato	nucleus	51.05	54.49
Solyc02g094100.2.1	Tomato	nucleus	50.77	54.19
Os12t0443800-01	Rice	nucleus	26.23	48.95
HORVU3Hr1G072910.6	Barley	cytosol	19.5	36.97
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	8.7	34.83
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	11.08	32.78
HORVU4Hr1G059040.2	Barley	cytosol	11.36	32.14
HORVU3Hr1G061800.1	Barley	cytosol, plastid	20.06	30.75
HORVU3Hr1G072480.2	Barley	cytosol	10.66	30.16
HORVU3Hr1G063300.1	Barley	cytosol	21.88	29.94
HORVU7Hr1G013190.8	Barley	plastid	22.72	28.98
HORVU0Hr1G021880.1	Barley	endoplasmic reticulum	15.99	28.93
HORVU3Hr1G010300.1	Barley	cytosol, plastid	20.76	28.24
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	11.08	27.62
HORVU7Hr1G026880.14	Barley	cytosol	17.39	26.67
HORVU7Hr1G091480.2	Barley	plastid	15.99	26.39
HORVU3Hr1G055830.5	Barley	cytosol	20.2	17.82
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	20.9	17.72
HORVU1Hr1G092440.13	Barley	cytosol, golgi, mitochondrion, plastid	21.04	17.3
HORVU2Hr1G019730.5	Barley	cytosol, plastid	22.72	15.43
HORVU6Hr1G075440.6	Barley	mitochondrion	20.06	14.5
HORVU7Hr1G037870.1	Barley	plastid	20.9	14.34
HORVU4Hr1G046420.6	Barley	cytosol, plastid	22.16	13.68
HORVU4Hr1G033300.1	Barley	cytosol	24.12	13.28

Protein Annotations

Gene3D:1.10.8.60	MapMan:13.3.6.5.5.1	Gene3D:3.40.50.300	UniProt:A0A287QSB2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006259	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0045128	EnsemblPlantsGene:HORVU5Hr1G029910	EnsemblPlants:HORVU5Hr1G029910.10	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF17	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI000B46F362	InterPro:Vps4_C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:182793324..182821846

Molecular Weight (calculated)

78878.3 Da

IEP (calculated)

9.986

GRAVY (calculated)

-0.595

Length

713 amino acids

Sequence
(BLAST)

001: YYLNKKRSKT LQPRKSGRRI EIPQIAETLK HPKWRSNPTL PIAPPPPARR TGGRRWRGGF GVVTPSSSVP TLRSSAGMQR RRRFSCSASS ASSIPRPSTP
101: IRVLKPPSSR PSAPQPLPVS PLHPAPARPT RTAFELAKKI AGCVFPKQGD VSVEKIKCSK YFQAFHQTSK GNVADQLNPA CEKFTIQGGP HIEESPAGID
201: NEKLSIAQTK ITSLYSNKFL KANTVSHNNL FKSEGNMSKE FDCVENEIRT NRNDNKHPAY LGVEEDKKHC GSLQTSKRKH TGFRSPICEH VNSPLSKDAA
301: DAPANGFVTA RIKLAMDAVQ KHGHNGHQGA SVSPQCDNSL STQNYGVRPS WNSRRGPRGN FVPPIRNNGG STCNAINSRG ITGKNDDSME DSIKKCLEML
401: CGPDGELPEK LRNLEPRLIE HVSNEIMDKD PNVRWDDIAG LDHAKKCVTE MVIWPLLRPD IFRGCRSPGR GLLLFGPPGT GKTMIGKAIA GEAKATFFYI
501: SASSLTSKWI GEGEKLVRAL FGVACCRQPA VIFVDEIDSL LSQRKSDGEH ESSRRLKTQF LIEMEGFDSG NEQILLIGAT NRPQELDEAA RRRLTKRLYI
601: PLPSSEARTW IIRNLLEKDG LFKLSEEETG VICKLTEGYS GSDMKNLVKD ASMGPLREAL QQGVEITKLN KEDVRPVMLK DFEAALQEVR PSVSTSELGI
701: YEEWNKQFGS LSI

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.