Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28494 | Canola | plastid | 85.0 | 89.2 |
| CDY34176 | Canola | plastid | 84.85 | 89.04 |
| Bra032982.1-P | Field mustard | plastid | 84.26 | 88.43 |
| VIT_14s0068g02130.t01 | Wine grape | nucleus | 67.5 | 68.71 |
| KRH57680 | Soybean | nucleus | 64.41 | 66.46 |
| KRG94255 | Soybean | nucleus | 64.26 | 66.31 |
| GSMUA_Achr6P27610_001 | Banana | cytosol | 61.47 | 63.82 |
| PGSC0003DMT400052226 | Potato | nucleus | 62.5 | 63.62 |
| Solyc02g094100.2.1 | Tomato | nucleus | 62.21 | 63.32 |
| TraesCS5D01G123800.1 | Wheat | nucleus | 60.0 | 59.3 |
| TraesCS5A01G109500.1 | Wheat | nucleus | 60.0 | 59.3 |
| TraesCS5B01G110300.1 | Wheat | nucleus | 59.85 | 59.16 |
| Zm00001d041083_P005 | Maize | nucleus | 58.38 | 58.55 |
| KXG23422 | Sorghum | nucleus | 58.24 | 57.56 |
| HORVU5Hr1G029910.10 | Barley | cytosol, mitochondrion, nucleus | 55.15 | 52.59 |
| AT2G34560.2 | Thale cress | cytosol | 21.03 | 36.39 |
| AT2G45500.5 | Thale cress | cytosol | 26.18 | 35.81 |
| Os12t0443800-01 | Rice | nucleus | 18.68 | 33.25 |
| AT2G27600.1 | Thale cress | cytosol | 20.59 | 32.18 |
| AT1G80350.1 | Thale cress | cytosol | 23.97 | 31.17 |
| AT4G27680.1 | Thale cress | endoplasmic reticulum, plasma membrane | 17.21 | 29.4 |
| AT5G53540.1 | Thale cress | endoplasmic reticulum | 16.76 | 28.29 |
| AT5G52882.1 | Thale cress | extracellular, vacuole | 22.94 | 18.82 |
| AT1G64110.2 | Thale cress | cytosol | 22.94 | 18.82 |
| AT4G28000.2 | Thale cress | extracellular | 22.94 | 18.75 |
| AT3G19740.1 | Thale cress | cytosol, mitochondrion, plastid | 22.65 | 15.51 |
| AT1G50140.1 | Thale cress | mitochondrion | 22.35 | 15.15 |
| AT4G24860.1 | Thale cress | cytosol, plastid | 25.0 | 15.15 |
| AT1G02890.1 | Thale cress | plastid | 25.29 | 13.8 |
| AT4G02480.1 | Thale cress | plastid | 25.29 | 13.6 |
| AT1G62130.1 | Thale cress | cytosol, plastid | 20.59 | 13.42 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:13.3.6.5.5.1 | Gene3D:3.40.50.300 | EntrezGene:822331 | InterPro:AAA+_ATPase | ProteinID:AEE77270.2 |
| ArrayExpress:AT3G27120 | EnsemblPlantsGene:AT3G27120 | RefSeq:AT3G27120 | TAIR:AT3G27120 | RefSeq:AT3G27120-TAIR-G | EnsemblPlants:AT3G27120.1 |
| TAIR:AT3G27120.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EMBL:AY924776 | ProteinID:BAB01094.1 | UniProt:F4JEX5 |
| GO:GO:0000003 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006281 | GO:GO:0006310 | GO:GO:0006950 | GO:GO:0006974 | GO:GO:0007049 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010569 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0045128 | RefSeq:NP_001319654.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF09336 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0020100 | ScanProsite:PS00674 | PANTHER:PTHR23074 |
| PANTHER:PTHR23074:SF17 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000848510C | InterPro:Vps4_C | SEG:seg |
Description
FIGL1ATPase family AAA domain-containing protein FIGL1 [Source:UniProtKB/Swiss-Prot;Acc:F4JEX5]
Coordinates
chr3:-:10000248..10004306
Molecular Weight (calculated)
75352.5 Da
IEP (calculated)
6.618
GRAVY (calculated)
-0.536
Length
680 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGSVVSDSE REFEFHFWGF GHLGKEEERI MAGKRSSPFS SPLLRPPPEF LNVKEEGETE TPCWRKEVDE NLKRLQSLLF GADKFLEKSD FSSAQILGLR
101: LLGFLDSRSV TDADRDFIGP IRREVASKID LALEGLVSDS DRKAFELANT APGAIFGSKG GFDVEKIKQS KYFGFHVSQS NGKGVKEMEE RHDTDKLIPK
201: APKSMMQAKL TSLYGNSIGK PDNQRKTSVN NQDRASDECV IVERSHGFGF GTKRPHAETS SLANDGEVKE DGAPNGFVSA KIKLEMDVRQ KRGSTESPSS
301: CLSPQSDKNA LGRGYGSRSG GLRRGYRSNF VPPVKTNGNN VGNLTSRIGG KTDDALDDST RTCLEMLCGP DGELPEKLRN LEPRLIEHVS NEIMDRDPNV
401: RWDDIAGLEH AKKCVTEMVI WPLLRPDIFK GCRSPGKGLL LFGPPGTGKT MIGKAIAGEA KATFFYISAS SLTSKWIGEG EKLVRALFGV ASCRQPAVIF
501: VDEIDSLLSQ RKSDGEHESS RRLKTQFLIE MEGFDSGSEQ ILLIGATNRP QELDEAARRR LTKRLYIPLP SSEARAWIIQ NLLKKDGLFT LSDDDMNIIC
601: NLTEGYSGSD MKNLVKDATM GPLREALKRG IDITNLTKDD MRLVTLQDFK DALQEVRPSV SQNELGIYEN WNNQFGSLSL
101: LLGFLDSRSV TDADRDFIGP IRREVASKID LALEGLVSDS DRKAFELANT APGAIFGSKG GFDVEKIKQS KYFGFHVSQS NGKGVKEMEE RHDTDKLIPK
201: APKSMMQAKL TSLYGNSIGK PDNQRKTSVN NQDRASDECV IVERSHGFGF GTKRPHAETS SLANDGEVKE DGAPNGFVSA KIKLEMDVRQ KRGSTESPSS
301: CLSPQSDKNA LGRGYGSRSG GLRRGYRSNF VPPVKTNGNN VGNLTSRIGG KTDDALDDST RTCLEMLCGP DGELPEKLRN LEPRLIEHVS NEIMDRDPNV
401: RWDDIAGLEH AKKCVTEMVI WPLLRPDIFK GCRSPGKGLL LFGPPGTGKT MIGKAIAGEA KATFFYISAS SLTSKWIGEG EKLVRALFGV ASCRQPAVIF
501: VDEIDSLLSQ RKSDGEHESS RRLKTQFLIE MEGFDSGSEQ ILLIGATNRP QELDEAARRR LTKRLYIPLP SSEARAWIIQ NLLKKDGLFT LSDDDMNIIC
601: NLTEGYSGSD MKNLVKDATM GPLREALKRG IDITNLTKDD MRLVTLQDFK DALQEVRPSV SQNELGIYEN WNNQFGSLSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.