Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90936 | Canola | plastid | 77.08 | 89.12 |
| Bra000878.1-P | Field mustard | plastid | 87.27 | 88.18 |
| CDY22053 | Canola | plastid | 85.06 | 87.55 |
| CDY50381 | Canola | plastid | 82.29 | 86.68 |
| Bra018548.1-P | Field mustard | plastid | 82.92 | 86.05 |
| CDX91317 | Canola | plastid | 71.62 | 85.63 |
| Bra036265.1-P | Field mustard | plastid | 86.8 | 85.12 |
| Os11t0661400-01 | Rice | cytosol | 16.21 | 85.06 |
| CDX97266 | Canola | plastid | 75.65 | 84.62 |
| CDY18018 | Canola | plastid | 81.58 | 84.59 |
| Zm00001d029385_P001 | Maize | cytosol | 12.09 | 80.1 |
| AT1G02890.1 | Thale cress | plastid | 77.94 | 79.13 |
| Zm00001d049686_P001 | Maize | plastid | 13.44 | 71.13 |
| TraesCS1B01G120800.1 | Wheat | cytosol | 13.12 | 65.61 |
| KRH71559 | Soybean | cytosol | 56.21 | 64.29 |
| GSMUA_Achr11P... | Banana | cytosol | 35.81 | 64.26 |
| Solyc09g074950.2.1 | Tomato | plastid | 62.37 | 63.78 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 64.27 | 63.17 |
| KRH71560 | Soybean | nucleus | 61.74 | 62.83 |
| Solyc06g084530.2.1 | Tomato | extracellular, nucleus | 62.13 | 62.83 |
| KRH31895 | Soybean | nucleus | 61.11 | 61.99 |
| KRH31896 | Soybean | nucleus | 59.92 | 61.83 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 52.49 | 60.14 |
| HORVU7Hr1G026880.14 | Barley | cytosol | 21.9 | 59.57 |
| Os03t0344700-01 | Rice | cytosol | 36.36 | 59.35 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 52.17 | 57.54 |
| GSMUA_Achr11P... | Banana | cytosol | 40.79 | 57.4 |
| GSMUA_Achr8P10090_001 | Banana | cytosol | 49.01 | 57.04 |
| KXG29076 | Sorghum | plastid | 53.36 | 54.66 |
| HORVU2Hr1G019730.5 | Barley | cytosol, plastid | 44.74 | 53.9 |
| TraesCS4A01G169300.15 | Wheat | plastid | 52.41 | 53.77 |
| TraesCS4D01G145100.12 | Wheat | plastid | 52.09 | 53.66 |
| EES16128 | Sorghum | cytosol, plastid | 39.53 | 53.65 |
| Zm00001d007698_P002 | Maize | plastid | 53.44 | 53.4 |
| TraesCS4B01G126300.7 | Wheat | nucleus | 52.81 | 53.1 |
| Os07t0672500-02 | Rice | cytosol, plastid | 45.22 | 52.91 |
| Zm00001d048689_P004 | Maize | plastid | 52.25 | 52.71 |
| Zm00001d007139_P007 | Maize | cytosol, plastid | 44.03 | 52.7 |
| TraesCS2A01G113900.1 | Wheat | cytosol | 45.77 | 52.59 |
| TraesCS2B01G132900.3 | Wheat | cytosol, plastid | 45.61 | 52.45 |
| TraesCS7B01G028300.1 | Wheat | cytosol | 32.49 | 52.09 |
| OQU90457 | Sorghum | cytosol, plastid | 44.9 | 51.92 |
| HORVU4Hr1G033300.1 | Barley | cytosol | 52.96 | 51.74 |
| TraesCS2D01G114500.1 | Wheat | cytosol, plastid | 46.09 | 51.41 |
| EER92288 | Sorghum | cytosol | 43.79 | 49.91 |
| TraesCS4B01G155600.1 | Wheat | cytosol | 43.16 | 49.64 |
| TraesCS4A01G142800.3 | Wheat | cytosol | 43.08 | 49.59 |
| TraesCS4D01G168600.1 | Wheat | cytosol | 43.32 | 49.5 |
| Zm00001d029120_P004 | Maize | cytosol | 43.32 | 48.67 |
| Zm00001d047494_P007 | Maize | cytosol | 42.13 | 48.19 |
| TraesCS7D01G127200.1 | Wheat | cytosol | 37.63 | 48.18 |
| TraesCS7A01G128400.2 | Wheat | cytosol, plastid | 38.18 | 47.63 |
| HORVU4Hr1G046420.6 | Barley | cytosol, plastid | 43.4 | 47.53 |
| AT1G62130.1 | Thale cress | cytosol, plastid | 38.74 | 46.98 |
| AT4G24860.1 | Thale cress | cytosol, plastid | 40.47 | 45.63 |
| OQU79278 | Sorghum | cytosol, plastid | 32.73 | 44.9 |
| AT4G27680.1 | Thale cress | endoplasmic reticulum, plasma membrane | 13.36 | 42.46 |
| AT5G53540.1 | Thale cress | endoplasmic reticulum | 12.81 | 40.2 |
| AT1G64110.2 | Thale cress | cytosol | 25.85 | 39.45 |
| AT4G28000.2 | Thale cress | extracellular | 25.85 | 39.3 |
| AT5G52882.1 | Thale cress | extracellular, vacuole | 25.61 | 39.08 |
| AT2G34560.2 | Thale cress | cytosol | 10.2 | 32.82 |
| AT3G19740.1 | Thale cress | cytosol, mitochondrion, plastid | 25.69 | 32.73 |
| AT1G50140.1 | Thale cress | mitochondrion | 24.51 | 30.91 |
| AT2G45500.5 | Thale cress | cytosol | 11.78 | 29.98 |
| AT1G80350.1 | Thale cress | cytosol | 12.17 | 29.45 |
| AT2G27600.1 | Thale cress | cytosol | 9.41 | 27.36 |
| AT3G27120.1 | Thale cress | nucleus | 13.6 | 25.29 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:827979 | UniProt:A0A178UYB6 |
| InterPro:AAA+_ATPase | ProteinID:AEE82177.1 | EMBL:AK229937 | ArrayExpress:AT4G02480 | EnsemblPlantsGene:AT4G02480 | RefSeq:AT4G02480 |
| TAIR:AT4G02480 | RefSeq:AT4G02480-TAIR-G | EnsemblPlants:AT4G02480.1 | TAIR:AT4G02480.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core |
| Unigene:At.27891 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0016787 | GO:GO:0016887 | RefSeq:NP_567238.2 | ProteinID:OAO98407.1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF138 |
| UniProt:Q0WM93 | SMART:SM00382 | InterPro:SMAD_FHA_dom_sf | SUPFAM:SSF49879 | SUPFAM:SSF52540 | UniParc:UPI0000196B06 |
| SEG:seg | : | : | : | : | : |
Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
Coordinates
chr4:-:1081671..1088846
Molecular Weight (calculated)
136531.0 Da
IEP (calculated)
5.750
GRAVY (calculated)
-0.326
Length
1265 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.