Factsheet for VIT_07s0005g00200.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0661400-01	Rice	cytosol	15.93	85.06
Zm00001d029385_P001	Maize	cytosol	11.97	80.63
Zm00001d049686_P001	Maize	plastid	13.36	71.97
KRH71559	Soybean	cytosol	61.38	71.43
Solyc06g084530.2.1	Tomato	extracellular, nucleus	69.31	71.3
KRH71560	Soybean	nucleus	68.22	70.64
Solyc09g074950.2.1	Tomato	plastid	67.44	70.17
KRH31895	Soybean	nucleus	67.83	70.01
KRH31896	Soybean	nucleus	65.81	69.09
GSMUA_Achr8P33760_001	Banana	cytosol	58.35	68.03
GSMUA_Achr11P...	Banana	cytosol	37.14	67.8
CDX90936	Canola	plastid	56.8	66.82
TraesCS1B01G120800.1	Wheat	cytosol	13.13	66.8
CDY32485	Canola	plastid	57.11	66.7
CDX91317	Canola	plastid	54.62	66.45
Bra000878.1-P	Field mustard	plastid	63.87	65.66
CDX97266	Canola	plastid	57.58	65.52
GSMUA_Achr3P00740_001	Banana	mitochondrion	58.04	65.13
Bra018548.1-P	Field mustard	plastid	61.62	65.05
AT1G02890.1	Thale cress	plastid	62.94	65.01
CDX89933	Canola	plastid	58.28	64.88
CDY18129	Canola	cytosol, plastid	60.99	64.66
AT4G02480.1	Thale cress	plastid	63.17	64.27
CDY22053	Canola	plastid	61.15	64.04
CDY50381	Canola	plastid	59.52	63.78
CDY18018	Canola	plastid	60.22	63.52
Bra032579.1-P	Field mustard	plastid	55.94	62.77
Bra036265.1-P	Field mustard	plastid	62.55	62.4
GSMUA_Achr8P10090_001	Banana	cytosol	52.06	61.64
GSMUA_Achr11P...	Banana	cytosol	43.05	61.62
HORVU7Hr1G026880.14	Barley	cytosol	22.07	61.08
Os03t0344700-01	Rice	cytosol	36.67	60.9
KXG29076	Sorghum	plastid	57.03	59.43
TraesCS4A01G169300.15	Wheat	plastid	56.64	59.12
TraesCS4D01G145100.12	Wheat	plastid	55.63	58.31
Zm00001d007698_P002	Maize	plastid	57.34	58.29
TraesCS4B01G126300.7	Wheat	nucleus	56.72	58.03
Zm00001d048689_P004	Maize	plastid	56.49	57.97
VIT_17s0000g01550.t01	Wine grape	cytosol, plastid	54.47	57.65
HORVU4Hr1G033300.1	Barley	cytosol	56.8	56.45
TraesCS7B01G028300.1	Wheat	cytosol	34.5	56.27
EES16128	Sorghum	cytosol, plastid	39.63	54.72
Zm00001d007139_P007	Maize	cytosol, plastid	44.52	54.21
HORVU2Hr1G019730.5	Barley	cytosol, plastid	44.06	54.0
OQU90457	Sorghum	cytosol, plastid	45.38	53.38
Os07t0672500-02	Rice	cytosol, plastid	44.76	53.28
TraesCS2A01G113900.1	Wheat	cytosol	45.3	52.95
Bra033356.1-P	Field mustard	cytosol, plastid	61.31	52.92
TraesCS2B01G132900.3	Wheat	cytosol, plastid	45.07	52.73
TraesCS2D01G114500.1	Wheat	cytosol, plastid	45.22	51.32
TraesCS4B01G155600.1	Wheat	cytosol	43.82	51.27
TraesCS4A01G142800.3	Wheat	cytosol	43.67	51.14
TraesCS4D01G168600.1	Wheat	cytosol	43.9	51.04
TraesCS7D01G127200.1	Wheat	cytosol	39.08	50.91
TraesCS7A01G128400.2	Wheat	cytosol, plastid	39.86	50.59
EER92288	Sorghum	cytosol	43.05	49.91
Zm00001d029120_P004	Maize	cytosol	43.12	49.29
HORVU4Hr1G046420.6	Barley	cytosol, plastid	43.67	48.66
Zm00001d047494_P007	Maize	cytosol	41.57	48.37
OQU79278	Sorghum	cytosol, plastid	34.34	47.94
VIT_02s0025g00650.t01	Wine grape	endoplasmic reticulum, vacuole	26.81	41.27
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	26.65	40.98
VIT_16s0050g01840.t01	Wine grape	cytosol, golgi, plasma membrane	25.17	40.35
VIT_16s0050g01830.t01	Wine grape	endoplasmic reticulum, vacuole	24.48	40.28
VIT_10s0003g03500.t01	Wine grape	cytosol	10.64	34.51
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	25.87	33.3
VIT_15s0048g01720.t01	Wine grape	cytosol	12.35	32.38
VIT_09s0002g05260.t01	Wine grape	cytosol	11.73	28.98
VIT_06s0080g00160.t01	Wine grape	extracellular	9.32	27.71
VIT_13s0106g00490.t01	Wine grape	cytosol	9.32	27.65
VIT_14s0068g02130.t01	Wine grape	nucleus	14.06	27.1
VIT_16s0098g01260.t01	Wine grape	endoplasmic reticulum	12.82	21.37
CDX89934	Canola	cytosol	0.31	1.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	ProteinID:CBI36835.3	UniProt:D7U269	InterPro:FHA_dom	GO:GO:0000166	GO:GO:0000398
GO:GO:0000956	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004788
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006298	GO:GO:0006355	GO:GO:0006772
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009229
GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0016887	GO:GO:0030529	GO:GO:0030975
GO:GO:0030983	InterPro:IPR000253	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF70	SMART:SM00382	InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879	SUPFAM:SSF52540	UniParc:UPI0001BE4A90
ArrayExpress:VIT_07s0005g00200	EnsemblPlantsGene:VIT_07s0005g00200	EnsemblPlants:VIT_07s0005g00200.t01	SEG:seg	:	:

Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D7U269]

Coordinates

chr7:+:2965213..2991125

Molecular Weight (calculated)

135843.0 Da

IEP (calculated)

5.922

GRAVY (calculated)

-0.312

Length

1287 amino acids

Sequence
(BLAST)

0001: MVETRRSSSS SKRRHSPSGS SPLPSGKRSK SQETASSSSE VPGPLPEEAL CQAKESGSEH IDQAPQPSDP PRTDTSKASD ACDVIAKEKS TEAVAEGEAL
0101: VAASPLPLVD SAVGGEKSKS VAVVSNRGRK RSVKSNATVA WGKLLSQCSQ YPHQPLCGPL FTIGQSRASN LSLRDPSISN TLCRLRHIER GGASVVLLEI
0201: TGGKGVVQVN GKIHQKSSTL IISGGDELVF SASGQPAYIF QQFTSDNLAA PVIPSSVSIL EAQSAPVKGI HVEARSGDPS AVAGASILAS LSNLRKDLSL
0301: LPPPKSGEDV QQGTEMTTPP CGASDSCIPD ADMKDAENND VAGVSSREKT DVPSSEAANE NLNLQSIGLD ACTDTEIGKV PGATYELRPL LRMLAGSSSS
0401: DFDLSGSISK ILEEQREIRE ILKDLEPPMA LTSTRRQAFK DSLQEGILSS DDIEVSFESF PYYLSDTTKN VLITSTYIHL MHIKFAKYTM DLSSVCPRIL
0501: LSGPAGSEIY QETLTKALAK HFTARLLIVD SLLLPGGSTP KDPDPVKENT RGERASIFAK RAAQAAVLQH KKPASSVEAD ITGASTVSSR ALPKQETSTA
0601: TSKNYIFKAG DRVKFVGPPP SGFSPMPPLR GPTNGYRGKV LLAFEENGSS KIGVRFDRSI PEGNDLGGLC EDDHGFFCPA DLLRLDSSSS DDVDKLALNE
0701: LFEVASNESK SSPLILFIKD IEKSIVGNPE AYXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXLDNL PENIVIIGSH TQMDSRKEKS HPGGLLFTKF
0801: GSNQTALLDL AFPDNFGRLH DRSKETPKTM KQLTRLFPNK VMIQLPQDES LLLDWKQQLD RDGETLKAQA NIVNIRSVLN RNGLDCPDLE TLSIKDQSLA
0901: SDGVDKLVGW ALSYHFMHCS DASVRDSKLL ISSESISYGL NLLQGIQSES KSLKKSLKDV VTENEFEKKL LSDVIPPSDI GVTFDDIGAL ENVKDTLKEL
1001: VMLPLQRPEL FCKGQLTKPC KGILLFGPPG TGKTMLAKAV ATEAGANFIN ISMSSITSKW FGEGEKYVKA VFSLASKIAP SVVFVDEVDS MLGRRENPGE
1101: HEAMRKMKNE FMVNWDGLRT KDKERVLVLA ATNRPFDLDE AVIRRLPRRL MVNLPDALNR EKILRVILAK EELAPDVGLE AVANMTDGYS GSDLKNLCVT
1201: AAHCPIREIL EREKKEKALA LAESRALPAL YCSTDIRPLN IEDFRYAHEQ VCASVSSEST NMTELLQWNE LYGEGGSRKR ASLSYFM

Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)

0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.