Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- golgi 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0050g01830.t01 | Wine grape | endoplasmic reticulum, vacuole | 77.21 | 79.28 |
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 78.33 | 75.15 |
| VIT_02s0025g00650.t01 | Wine grape | endoplasmic reticulum, vacuole | 67.87 | 65.19 |
| KRH35220 | Soybean | endoplasmic reticulum | 60.02 | 59.58 |
| KRG91604 | Soybean | endoplasmic reticulum, plasma membrane | 60.15 | 58.9 |
| VIT_10s0003g03500.t01 | Wine grape | cytosol | 15.32 | 30.98 |
| VIT_15s0048g01720.t01 | Wine grape | cytosol | 18.56 | 30.35 |
| VIT_13s0106g00490.t01 | Wine grape | cytosol | 15.44 | 28.57 |
| VIT_06s0080g00160.t01 | Wine grape | extracellular | 15.32 | 28.41 |
| VIT_09s0002g05260.t01 | Wine grape | cytosol | 17.81 | 27.45 |
| VIT_01s0011g02220.t01 | Wine grape | cytosol, mitochondrion, plastid | 34.0 | 27.3 |
| VIT_17s0000g01550.t01 | Wine grape | cytosol, plastid | 40.22 | 26.56 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 40.35 | 25.17 |
| VIT_14s0068g02130.t01 | Wine grape | nucleus | 19.8 | 23.8 |
| VIT_16s0098g01260.t01 | Wine grape | endoplasmic reticulum | 20.3 | 21.11 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core |
| ProteinID:CCB47798 | ProteinID:CCB47798.1 | ncoils:Coil | UniProt:F6H6J7 | EMBL:FN595243 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016787 | GO:GO:0016887 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF98 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| UniParc:UPI000210A394 | ArrayExpress:VIT_16s0050g01840 | EnsemblPlantsGene:VIT_16s0050g01840 | EnsemblPlants:VIT_16s0050g01840.t01 | SEG:seg | : |
Description
No Description!
Coordinates
chr16:-:18755894..18768677
Molecular Weight (calculated)
90081.6 Da
IEP (calculated)
6.241
GRAVY (calculated)
-0.331
Length
803 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKEIWTAQK SMHRGWGRPE VMEQKQILLS ALSLGIGVSV GLTLASGQTM SRWTGLLNCS AGAITEAQLE HELRGQVVDG KESKITFEEF PYILSKQTRG
101: LLTSAAHVHL RLSDFSKHTQ KLMPAGRAIL LSGPAELYQR ALAKALAQFF EAKLLLLDVN DFSLKMQSKY GCPRKEYSSK KSIPETTLKQ ISGFLGSFSI
201: LPQREETKDT LSRQSTGANI KSKSMDPPQH CGSASTSSNA STIPPNMLVL LLLISFVAHI KCTSSWAFDE KHLLQSLYKV LVSVSETCSM ILYIRDVDKL
301: LLQSDRFYKL FRKMLDKLSG SVLILGSRML DPDDEDNEMD ERVSLLFPCN IEIEKPEDET HLDRWEAQLK EETKVIQFQD NKNYMAKVLA ANDLDCDDLG
401: SICYADPEIL SDYTEEIVIS AISYHLLNNK DPEYRNGKLV ISSKSLSHGL SLFQEDAPNA ESKVFPRCNE FESRIRPEVI PPNRIGVTFD DIGALDDIKE
501: SLEELVMFPL QRPEIFKGGL LKPCRGILLF GPPGTGKTML AKAMANEAGA SFINVSMSTI TSKWFGEDEK NVRALFTLAA KISPTIIFVD EVDSMLGQRL
601: EFGEDCSMRK IKNEFMTHWD GLLTKAGERV LVLAATNRPF DLDEAIIRRF DHRIMVGLPS VESREMILKT LLAKEQAEDL DFKELATMTE GYTGSDLKNL
701: CMAAAYRPVR ELAQQERMKK DKKKKQKADE GKSSEDASDT REEAKGERVI VLRPLNMEDM RQAKNQVAAS FASDGAAMNK LKQWNELYGE GGSRKKEQLT
801: YFL
101: LLTSAAHVHL RLSDFSKHTQ KLMPAGRAIL LSGPAELYQR ALAKALAQFF EAKLLLLDVN DFSLKMQSKY GCPRKEYSSK KSIPETTLKQ ISGFLGSFSI
201: LPQREETKDT LSRQSTGANI KSKSMDPPQH CGSASTSSNA STIPPNMLVL LLLISFVAHI KCTSSWAFDE KHLLQSLYKV LVSVSETCSM ILYIRDVDKL
301: LLQSDRFYKL FRKMLDKLSG SVLILGSRML DPDDEDNEMD ERVSLLFPCN IEIEKPEDET HLDRWEAQLK EETKVIQFQD NKNYMAKVLA ANDLDCDDLG
401: SICYADPEIL SDYTEEIVIS AISYHLLNNK DPEYRNGKLV ISSKSLSHGL SLFQEDAPNA ESKVFPRCNE FESRIRPEVI PPNRIGVTFD DIGALDDIKE
501: SLEELVMFPL QRPEIFKGGL LKPCRGILLF GPPGTGKTML AKAMANEAGA SFINVSMSTI TSKWFGEDEK NVRALFTLAA KISPTIIFVD EVDSMLGQRL
601: EFGEDCSMRK IKNEFMTHWD GLLTKAGERV LVLAATNRPF DLDEAIIRRF DHRIMVGLPS VESREMILKT LLAKEQAEDL DFKELATMTE GYTGSDLKNL
701: CMAAAYRPVR ELAQQERMKK DKKKKQKADE GKSSEDASDT REEAKGERVI VLRPLNMEDM RQAKNQVAAS FASDGAAMNK LKQWNELYGE GGSRKKEQLT
801: YFL
001: MEQKSVLLSA LGVGVGLGIG LASGQSLGRW ANGSGSVEDG LTGEQIEQEL IRQIVDGRES TVTFEEFPYF LSKRTRELLT SVAYVHLKEY DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KHN5]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.