Factsheet for VIT_16s0050g01850.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08796	Soybean	cytosol	18.52	89.08
VIT_16s0050g01830.t01	Wine grape	endoplasmic reticulum, vacuole	79.81	85.42
VIT_16s0050g01840.t01	Wine grape	cytosol, golgi, plasma membrane	75.15	78.33
KRH08789	Soybean	cytosol	31.18	77.91
VIT_02s0025g00650.t01	Wine grape	endoplasmic reticulum, vacuole	76.82	76.91
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	75.15	76.15
PGSC0003DMT400051401	Potato	endoplasmic reticulum	75.51	76.14
KRH08780	Soybean	extracellular, plasma membrane	74.07	75.89
KRH38312	Soybean	endoplasmic reticulum	73.72	75.52
CDY19639	Canola	extracellular, vacuole	70.25	73.23
CDY56163	Canola	extracellular, vacuole	70.25	73.04
CDY51824	Canola	extracellular, plasma membrane	70.13	72.83
CDY49165	Canola	extracellular, plasma membrane	67.62	72.47
AT5G52882.1	Thale cress	extracellular, vacuole	71.33	72.01
Bra029104.1-P	Field mustard	extracellular, plasma membrane	70.73	71.93
Bra003102.1-P	Field mustard	extracellular, plasma membrane	70.01	71.29
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	69.41	70.77
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	70.01	70.69
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	54.96	70.55
AT4G28000.2	Thale cress	extracellular	70.01	70.43
Os01t0226400-01	Rice	plasma membrane	68.94	68.69
CDX89214	Canola	extracellular, plasma membrane	62.13	68.6
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	68.46	68.21
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	68.34	68.1
EES00021	Sorghum	endoplasmic reticulum	68.82	68.0
Zm00001d008983_P001	Maize	vacuole	68.58	67.85
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	67.62	67.7
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	67.86	67.54
Zm00001d039315_P003	Maize	vacuole	67.38	67.06
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	55.79	66.62
CDY19014	Canola	endoplasmic reticulum, extracellular	56.75	66.16
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	55.56	66.05
CDX96166	Canola	cytosol	51.37	63.33
VIT_10s0003g03500.t01	Wine grape	cytosol	15.29	32.24
VIT_15s0048g01720.t01	Wine grape	cytosol	18.64	31.77
VIT_06s0080g00160.t01	Wine grape	extracellular	14.81	28.64
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	34.17	28.6
VIT_17s0000g01550.t01	Wine grape	cytosol, plastid	41.22	28.37
VIT_13s0106g00490.t01	Wine grape	cytosol	14.7	28.34
VIT_09s0002g05260.t01	Wine grape	cytosol	17.2	27.64
VIT_07s0005g00200.t01	Wine grape	plastid	40.98	26.65
VIT_14s0068g02130.t01	Wine grape	nucleus	20.07	25.15
VIT_16s0098g01260.t01	Wine grape	endoplasmic reticulum	19.83	21.5

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100257581	wikigene:100257581	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase
EMBL:AM434106	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ProteinID:CAN73743	ProteinID:CAN73743.1	ProteinID:CBI22603
ProteinID:CBI22603.3	ncoils:Coil	UniProt:E0CUQ3	EMBL:FN595243	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0016787	GO:GO:0016887	EntrezGene:LOC100257581	wikigene:LOC100257581	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0001BE2047	ArrayExpress:VIT_16s0050g01850	EnsemblPlantsGene:VIT_16s0050g01850	EnsemblPlants:VIT_16s0050g01850.t01	unigene:Vvi.12153
RefSeq:XP_002277491	RefSeq:XP_002277491.1	RefSeq:XP_002277515	RefSeq:XP_002277515.1	RefSeq:XP_010662653.1	RefSeq:XP_019081663.1
RefSeq:XP_019081664.1	RefSeq:XP_019081665.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:-:18768678..18777506

Molecular Weight (calculated)

93247.2 Da

IEP (calculated)

5.996

GRAVY (calculated)

-0.474

Length

837 amino acids

Sequence
(BLAST)

001: MEQKHIFLSA LSVGVGVSVG LGLASGQTVS RWTGLNCSPD AITEEQIEHE LLRQVVDGRE SKITFDEFPY FLSEQTRVLL TSAAYVHLKH SDFSKHTRNL
101: APASRAILLS GPAELYQQTL AKALAHFFEA KLLLLDVNDF SLKLQGKYGC PKKESSSKKS ISETTLGRMS SFLGSFSILP QREETKGTLS RQSSGADIKS
201: RCMEGANNPP KHRRNASTSS DMNTVASQST TQSSAHVKRT SNWAFDEKRL LQSLCKVLVS VSEARSIILY IRDVEKFLLQ SDRFYKLFQK MLDKLSGSVL
301: ILGSRMLDND DEGREVDERV GLLFPYNIEI RAPEDETRLD SWKSQLEEEL KMLQFQENKN HIAEVLAAND LDCDDLGSIC HADSMILSNY IEEIVISAIS
401: YHLMNNKDPE YRNGKLVISS KSLSHGLNIF QQGKSGGKDT LKLETNAESS KDTEGEESTG GKPEGKAETS APGSKSETEK SALAKKDGEN QPATKAAEVP
501: PDNEFEKRIR PEVIPANEIG VTFDDIGALS DIKESLQELV MLPLRRPDLF KGGLLKPCRG ILLFGPPGTG KTMLAKAIAN EAGASFINVS MSTITSKWFG
601: EDEKNVRALF TLAAKVSPTI IFVDEVDSML GQRTRVGEHE AMRKIKNEFM THWDGLLTKA GERILVLAAT NRPFDLDEAI IRRFERRIMV GLPSVESREM
701: ILKTLLAKEK AEDLDFKELA TMTEGYTGSD LKNLCVTAAY RPVRELLQQE RMMKDKEKKQ KADEGQSSED ASDAKEEAKE EKEIVLRPLN MEDMRQAKNQ
801: VASSFASEGA VMNELKQWNE LYGEGGSRKK KQLTYFL

Best Arabidopsis Sequence Match ( AT4G28000.1 )
(BLAST)

001: MEQKSVLFSA LGVGVGLGIG LASGQSLGKW ANGSISAEDG LTGEKIEQEL VRQIVDGRES SVTFDEFPYY LSEKTRLLLT SAAYVHLKQS DISKHTRNLA
101: PGSKAILLSG PAEFYQQMLA KALAHYFESK LLLLDITDFS IKIQSKYGCV KKEPSHKRSI SELTMDKMSN LMGSISVLSQ KEATRGTLRR HTSGNDLHSR
201: GFDVTSQPPR LKRNASAASD MSSISSRSAT SVSASSKRSA NLCFDERLFL QSLYKVLVSI SETNPIIIYL RDVEKLCQSE RFYKLFQRLL TKLSGPVLVL
301: GSRLLEPEDD CQEVGEGISA LFPYNIEIRP PEDENQLMSW KTRFEDDMKV IQFQDNKNHI AEVLAANDLE CDDLGSICHA DTMFLSSHIE EIVVSAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLNILQE GQGCFEDSLK LDTNIDSKVE EGEGITKSES KSETTVPENK NESDTSIPAA KNECPLPPKA PEVAPDNEFE
501: KRIRPEVIPA NEIGVTFADI GSLDETKESL QELVMLPLRR PDLFKGGLLK PCRGILLFGP PGTGKTMMAK AIANEAGASF INVSMSTITS KWFGEDEKNV
601: RALFTLAAKV SPTIIFVDEV DSMLGQRTRV GEHEAMRKIK NEFMTHWDGL MSNAGDRILV LAATNRPFDL DEAIIRRFER RIMVGLPSVE SREKILRTLL
701: SKEKTENLDF QELAQMTDGY SGSDLKNFCT TAAYRPVREL IKQECLKDQE RRKREEAEKN SEEGSEAKEE VSEERGITLR PLSMEDMKVA KSQVAASFAA
801: EGAGMNELKQ WNDLYGEGGS RKKEQLSYFL

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G28000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.