Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 3
- vacuole 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
plasma membrane: 28056797 |
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00021 | Sorghum | endoplasmic reticulum | 86.79 | 86.07 |
| TraesCS3D01G159200.1 | Wheat | cytosol, vacuole | 85.48 | 85.89 |
| HORVU3Hr1G030770.20 | Barley | cytosol, vacuole | 85.71 | 85.61 |
| TraesCS3B01G178200.1 | Wheat | cytosol, vacuole | 85.6 | 85.6 |
| TraesCS3A01G151300.2 | Wheat | cytosol, vacuole | 85.48 | 85.48 |
| Zm00001d008983_P001 | Maize | vacuole | 85.71 | 85.11 |
| Zm00001d039315_P003 | Maize | vacuole | 84.76 | 84.66 |
| KRH08796 | Soybean | cytosol | 16.79 | 81.03 |
| GSMUA_Achr7P14270_001 | Banana | cytosol | 59.64 | 70.86 |
| VIT_02s0025g00650.t01 | Wine grape | endoplasmic reticulum, vacuole | 70.48 | 70.81 |
| AT1G64110.2 | Thale cress | cytosol | 68.21 | 69.12 |
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 68.69 | 68.94 |
| CDY08360 | Canola | endoplasmic reticulum | 68.1 | 68.83 |
| Solyc08g081740.2.1 | Tomato | unclear | 68.45 | 68.78 |
| CDY38192 | Canola | plasma membrane | 67.98 | 68.71 |
| PGSC0003DMT400031731 | Potato | cytosol, endoplasmic reticulum | 68.1 | 68.59 |
| Bra027756.1-P | Field mustard | endoplasmic reticulum | 67.74 | 68.47 |
| CDY49165 | Canola | extracellular, plasma membrane | 63.1 | 67.86 |
| KRH41256 | Soybean | extracellular | 68.69 | 67.64 |
| CDY56163 | Canola | extracellular, vacuole | 64.76 | 67.58 |
| KRH59989 | Soybean | endoplasmic reticulum | 67.38 | 67.38 |
| CDY19639 | Canola | extracellular, vacuole | 64.4 | 67.37 |
| KRH08780 | Soybean | extracellular, plasma membrane | 65.48 | 67.32 |
| KRH38312 | Soybean | endoplasmic reticulum | 65.48 | 67.32 |
| CDY51824 | Canola | extracellular, plasma membrane | 64.52 | 67.25 |
| Solyc03g007760.2.1 | Tomato | endoplasmic reticulum | 66.07 | 67.19 |
| PGSC0003DMT400051401 | Potato | endoplasmic reticulum | 66.31 | 67.11 |
| KRH27876 | Soybean | cytosol | 66.9 | 66.98 |
| KRH77598 | Soybean | endoplasmic reticulum | 66.67 | 66.75 |
| AT5G52882.1 | Thale cress | extracellular, vacuole | 65.71 | 66.59 |
| Bra003102.1-P | Field mustard | extracellular, plasma membrane | 65.0 | 66.42 |
| AT4G28000.2 | Thale cress | extracellular | 65.71 | 66.35 |
| Bra029104.1-P | Field mustard | extracellular, plasma membrane | 65.0 | 66.34 |
| Bra024235.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 64.4 | 65.9 |
| KRH08789 | Soybean | cytosol | 26.19 | 65.67 |
| Bra026293.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.52 | 65.38 |
| Os05t0584600-02 | Rice | vacuole | 63.93 | 62.81 |
| CDX89214 | Canola | extracellular, plasma membrane | 56.55 | 62.66 |
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.83 | 60.91 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 51.79 | 60.59 |
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.71 | 60.51 |
| CDX96166 | Canola | cytosol | 48.45 | 59.94 |
| Os11t0661400-01 | Rice | cytosol | 16.55 | 57.68 |
| Os02t0749150-01 | Rice | mitochondrion | 17.5 | 54.85 |
| Os01t0623500-01 | Rice | cytosol | 50.83 | 52.59 |
| Os06t0225900-01 | Rice | cytosol | 22.86 | 52.32 |
| Os06t0714500-01 | Rice | plasma membrane | 18.1 | 38.68 |
| Os03t0344700-01 | Rice | cytosol | 34.52 | 37.42 |
| Os01t0141100-02 | Rice | cytosol, plasma membrane | 12.62 | 34.98 |
| Os01t0757400-02 | Rice | cytosol | 14.88 | 32.38 |
| Os06t0130000-02 | Rice | cytosol | 18.57 | 32.03 |
| Os01t0673500-01 | Rice | cytosol | 15.36 | 31.46 |
| Os01t0683100-01 | Rice | extracellular | 17.5 | 28.32 |
| Os02t0159900-01 | Rice | plasma membrane | 14.4 | 27.94 |
| Os07t0672500-02 | Rice | cytosol, plastid | 35.95 | 27.94 |
| Os01t0141300-00 | Rice | cytosol | 14.17 | 24.9 |
| Os12t0443800-01 | Rice | nucleus | 2.98 | 6.54 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:4326743 | InterPro:AAA+_ATPase | EMBL:AK102301 |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ProteinID:BAD81507.1 | ProteinID:BAD81550.1 | ProteinID:BAF04378.1 | ProteinID:BAS71118.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:Os01g0226400 |
| EnsemblPlants:Os01t0226400-01 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF98 |
| UniProt:Q5NAF6 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI000049E7B1 | RefSeq:XP_015627525.1 |
| SEG:seg | : | : | : | : | : |
Description
ATPase, AAA-type, core domain containing protein. (Os01t0226400-01)
Coordinates
chr1:-:6970912..6976706
Molecular Weight (calculated)
93425.7 Da
IEP (calculated)
8.465
GRAVY (calculated)
-0.378
Length
840 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKHVVMSA VGIGIGVGVG LGLASAPWAG GGGQGARVGV TVERVEQELR RLVVDGADSR VTFDGFPYYL SEQTRVLLTS AAYVHLKQAD ISQYTRNLAP
101: ASRAILLSGP AELYQQMLAK ALAHYFEAKL LLLDPTDFLI KIHSKYGGGS STDSSFKRSI SETTLEKVSG LLGSLSILPQ KEKPKGTIRR QSSMTDMKLR
201: SSESTSSFPK LKRNASTSSD MSSLASQGPP NNPASLRRAS SWTFDEKILV QAVYKVLHSV SKKNPIVLYI RDVEKFLHKS KKMYVMFEKL LNKLEGPVLV
301: LGSRIVDMDF DEELDERLTA LFPYNIEIKP PENENHLVSW NSQLEEDMKM IQFQDNRNHI TEVLAENDLE CDDLGSICLS DTMVLGRYIE EIVVSAVSYH
401: LMNKKDPEYR NGKLLLSAKS LSHALEIFQE NKMYDKDSMK LEAKRDASKV ADRGIAPFAA KSETKPATLL PPVPPTAAAA PPVESKAEPE KFEKKDNPSP
501: AAKAPEMPPD NEFEKRIRPE VIPANEIGVT FDDIGALSDI KESLQELVML PLRRPDLFKG GLLKPCRGIL LFGPPGTGKT MLAKAIANEA QASFINVSMS
601: TITSKWFGED EKNVRALFTL AAKVSPTIIF VDEVDSMLGQ RNRAGEHEAM RKIKNEFMTH WDGLLSRPDQ KILVLAATNR PFDLDEAIIR RFERRIMVGL
701: PSLESRELIL RSLLSKEKVD GGLDYKELAT MTEGYSGSDL KNLCTTAAYR PVRELIQKER KKELEKKREQ GGNASDASKM KEKDETIILR PLNMKDLKEA
801: KNQVAASFAA EGTIMGELKQ WNELYGEGGS RKKQQLTYFL
101: ASRAILLSGP AELYQQMLAK ALAHYFEAKL LLLDPTDFLI KIHSKYGGGS STDSSFKRSI SETTLEKVSG LLGSLSILPQ KEKPKGTIRR QSSMTDMKLR
201: SSESTSSFPK LKRNASTSSD MSSLASQGPP NNPASLRRAS SWTFDEKILV QAVYKVLHSV SKKNPIVLYI RDVEKFLHKS KKMYVMFEKL LNKLEGPVLV
301: LGSRIVDMDF DEELDERLTA LFPYNIEIKP PENENHLVSW NSQLEEDMKM IQFQDNRNHI TEVLAENDLE CDDLGSICLS DTMVLGRYIE EIVVSAVSYH
401: LMNKKDPEYR NGKLLLSAKS LSHALEIFQE NKMYDKDSMK LEAKRDASKV ADRGIAPFAA KSETKPATLL PPVPPTAAAA PPVESKAEPE KFEKKDNPSP
501: AAKAPEMPPD NEFEKRIRPE VIPANEIGVT FDDIGALSDI KESLQELVML PLRRPDLFKG GLLKPCRGIL LFGPPGTGKT MLAKAIANEA QASFINVSMS
601: TITSKWFGED EKNVRALFTL AAKVSPTIIF VDEVDSMLGQ RNRAGEHEAM RKIKNEFMTH WDGLLSRPDQ KILVLAATNR PFDLDEAIIR RFERRIMVGL
701: PSLESRELIL RSLLSKEKVD GGLDYKELAT MTEGYSGSDL KNLCTTAAYR PVRELIQKER KKELEKKREQ GGNASDASKM KEKDETIILR PLNMKDLKEA
801: KNQVAASFAA EGTIMGELKQ WNELYGEGGS RKKQQLTYFL
001: MDSKQMLLSA LGVGVGVGVG LGLASGQAVG KWAGGNSSSN NAVTADKMEK EILRQVVDGR ESKITFDEFP YYLSEQTRVL LTSAAYVHLK HFDASKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQAPLKR SSSWSFDEKL LVQSLYKVLA YVSKANPIVL YLRDVENFLF RSQRTYNLFQ KLLQKLSGPV
301: LILGSRIVDL SSEDAQEIDE KLSAVFPYNI DIRPPEDETH LVSWKSQLER DMNMIQTQDN RNHIMEVLSE NDLICDDLES ISFEDTKVLS NYIEEIVVSA
401: LSYHLMNNKD PEYRNGKLVI SSISLSHGFS LFREGKAGGR EKLKQKTKEE SSKEVKAESI KPETKTESVT TVSSKEEPEK EAKAEKVTPK APEVAPDNEF
501: EKRIRPEVIP AEEINVTFKD IGALDEIKES LQELVMLPLR RPDLFTGGLL KPCRGILLFG PPGTGKTMLA KAIAKEAGAS FINVSMSTIT SKWFGEDEKN
601: VRALFTLASK VSPTIIFVDE VDSMLGQRTR VGEHEAMRKI KNEFMSHWDG LMTKPGERIL VLAATNRPFD LDEAIIRRFE RRIMVGLPAV ENREKILRTL
701: LAKEKVDENL DYKELAMMTE GYTGSDLKNL CTTAAYRPVR ELIQQERIKD TEKKKQREPT KAGEEDEGKE ERVITLRPLN RQDFKEAKNQ VAASFAAEGA
801: GMGELKQWNE LYGEGGSRKK EQLTYFL
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQAPLKR SSSWSFDEKL LVQSLYKVLA YVSKANPIVL YLRDVENFLF RSQRTYNLFQ KLLQKLSGPV
301: LILGSRIVDL SSEDAQEIDE KLSAVFPYNI DIRPPEDETH LVSWKSQLER DMNMIQTQDN RNHIMEVLSE NDLICDDLES ISFEDTKVLS NYIEEIVVSA
401: LSYHLMNNKD PEYRNGKLVI SSISLSHGFS LFREGKAGGR EKLKQKTKEE SSKEVKAESI KPETKTESVT TVSSKEEPEK EAKAEKVTPK APEVAPDNEF
501: EKRIRPEVIP AEEINVTFKD IGALDEIKES LQELVMLPLR RPDLFTGGLL KPCRGILLFG PPGTGKTMLA KAIAKEAGAS FINVSMSTIT SKWFGEDEKN
601: VRALFTLASK VSPTIIFVDE VDSMLGQRTR VGEHEAMRKI KNEFMSHWDG LMTKPGERIL VLAATNRPFD LDEAIIRRFE RRIMVGLPAV ENREKILRTL
701: LAKEKVDENL DYKELAMMTE GYTGSDLKNL CTTAAYRPVR ELIQQERIKD TEKKKQREPT KAGEEDEGKE ERVITLRPLN RQDFKEAKNQ VAASFAAEGA
801: GMGELKQWNE LYGEGGSRKK EQLTYFL
Arabidopsis Description
p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.