Factsheet for PGSC0003DMT400031731

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g081740.2.1	Tomato	unclear	97.24	97.01
VIT_02s0025g00650.t01	Wine grape	endoplasmic reticulum, vacuole	75.42	75.24
KRH27876	Soybean	cytosol	72.42	71.99
AT1G64110.2	Thale cress	cytosol	71.22	71.65
KRH41256	Soybean	extracellular	72.78	71.16
CDY08360	Canola	endoplasmic reticulum	70.62	70.88
Bra027756.1-P	Field mustard	endoplasmic reticulum	70.5	70.76
CDY38192	Canola	plasma membrane	70.5	70.76
PGSC0003DMT400051401	Potato	endoplasmic reticulum	70.26	70.6
KRH77598	Soybean	endoplasmic reticulum	70.74	70.32
KRH59989	Soybean	endoplasmic reticulum	70.74	70.24
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	68.82	68.33
Zm00001d008983_P001	Maize	vacuole	69.18	68.2
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	68.35	68.18
Os01t0226400-01	Rice	plasma membrane	68.59	68.1
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	68.59	68.01
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	68.47	67.98
Zm00001d039315_P003	Maize	vacuole	68.23	67.66
EES00021	Sorghum	endoplasmic reticulum	68.35	67.3
PGSC0003DMT400031598	Potato	endoplasmic reticulum	18.35	42.62
PGSC0003DMT400013963	Potato	endoplasmic reticulum	19.3	41.07
PGSC0003DMT400047633	Potato	endoplasmic reticulum	18.59	41.01
PGSC0003DMT400054532	Potato	cytosol	14.51	31.19
PGSC0003DMT400019113	Potato	cytosol	15.35	29.63
PGSC0003DMT400042654	Potato	cytosol	18.35	29.54
PGSC0003DMT400019119	Potato	cytosol	7.67	29.49
PGSC0003DMT400050194	Potato	cytosol	15.35	29.43
PGSC0003DMT400071442	Potato	cytosol	11.39	29.14
PGSC0003DMT400052226	Potato	nucleus	20.38	25.45

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:102606049	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0007275	GO:GO:0008150	GO:GO:0009987	GO:GO:0030154	GO:GO:0048235	UniProt:M1AW50
InterPro:P-loop_NTPase	PFAM:PF00004	EnsemblPlantsGene:PGSC0003DMG400012174	PGSC:PGSC0003DMG400012174	EnsemblPlants:PGSC0003DMT400031731	ScanProsite:PS00674
PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000296D655
RefSeq:XP_006343914.1	SEG:seg	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012174]

Coordinates

chr8:-:55414530..55421510

Molecular Weight (calculated)

92358.3 Da

IEP (calculated)

6.468

GRAVY (calculated)

-0.292

Length

834 amino acids

Sequence
(BLAST)

001: MEQKNMLLSA LGVGIGVGVG IGLASGQTVS RWASGSAANV ITPLIMEQEM LNLIANGKDS KVTFDEFPYY LSEQTRVLLT SASFVHLTNA DFAKHTRNLS
101: PASRTILLSG PAELYQQMLA KALAHYFNAK LLLLDVTDFS LKMQSKYGGT CKEYSFKRSI SETTVGRMSG MFGSFSMLQS KEENKGSLRR QSSGVDIGSK
201: DGSFIATNLR RNASASANLN DISSYGSSGN LAPLMRNSSW AFDERLLIQT LYKIIVKVSK TSPMVLYLRD VEKILCRSEK IYVLFQKMLK KLSGAVLILG
301: SRIVDPGNDY REIDERLSSV FPYNLEIKPP EEETHLVSWK SQLEEDMKMI QFQDNRNHIM EVLSANDIEC EDLGSICMSD TMVLSNYIEE IVVSAISYHL
401: MNTKDPEYRN GKLVISSSSL SHGLDVFQEG KSAQKDTIKL EAQAETSKDA LGREISTTKP EAKTEGVLPE NKGEAEAPAP PVMDGNITTP APKTPEVPPD
501: NEFEKRIRPE VIPANEIGVT FADIGALDEL KESLQELVML PLRRPDLFKG GLLKPCRGIL LFGPPGTGKT MLAKAIAREA GASFINVSMS TITSKWFGED
601: EKNVRALFTL AAKVSPTIIF VDEVDSMLGQ RSRAGEHEAM RKIKNEFMTH WDGLLTKAGE KILVLAATNR PFDLDEAIIR RFERRIMVGL PSVENREMIM
701: KTLLAKERVD DGMDFKELGT MTEGYSGSDL KNLCTTAAYR PVRELIQQER LKDLDKKCRA EEAKKAGVAP STDADKEDKV ITIRPLNMAD FKEAKKQVAA
801: SFAAGGAIMS ELKQWNESYG EGGSRKKEQL SYFL

Best Arabidopsis Sequence Match ( AT1G64110.3 )
(BLAST)

001: MDSKQMLLSA LGVGVGVGVG LGLASGQAVG KWAGGNSSSN NAVTADKMEK EILRQVVDGR ESKITFDEFP YYLSEQTRVL LTSAAYVHLK HFDASKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQAPLKR SSSWSFDEKL LVQSLYKVLA YVSKANPIVL YLRDVENFLF RSQRTYNLFQ KLLQKLSGPV
301: LILGSRIVDL SSEDAQEIDE KLSAVFPYNI DIRPPEDETH LVSWKSQLER DMNMIQTQDN RNHIMEVLSE NDLICDDLES ISFEDTKVLS NYIEEIVVSA
401: LSYHLMNNKD PEYRNGKLVI SSISLSHGFS LFREGKAGGR EKLKQKTKEE SSKEVKAESI KPETKTESVT TVSSKEEPEK EAKAEKVTPK APEVAPDNEF
501: EKRIRPEVIP AEEINVTFKD IGALDEIKES LQELVMLPLR RPDLFTGGLL KPCRGILLFG PPGTGKTMLA KAIAKEAGAS FINVSMSTIT SKWFGEDEKN
601: VRALFTLASK VSPTIIFVDE VDSMLGQRTR VGEHEAMRKI KNEFMSHWDG LMTKPGERIL VLAATNRPFD LDEAIIRRFE RRIMVGLPAV ENREKILRTL
701: LAKEKVDENL DYKELAMMTE GYTGSDLKNL CTTAAYRPVR ELIQQERIKD TEKKKQREPT KAGEEDEGKE ERVITLRPLN RQDFKEAKNQ VAASFAAEGA
801: GMGELKQWNE LYGEGGSRKK EQLTYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.