Factsheet for Os01t0683100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

extracellular: 28232208

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011611_P005	Maize	cytosol	91.91	92.44
EES01274	Sorghum	cytosol	92.1	92.1
TraesCS3A01G265700.1	Wheat	cytosol	91.91	91.55
TraesCS3B01G299100.1	Wheat	cytosol	91.91	91.55
TraesCS3D01G265900.1	Wheat	cytosol	91.91	91.55
HORVU3Hr1G063300.1	Barley	cytosol	91.33	90.98
VIT_09s0002g05260.t01	Wine grape	cytosol	81.89	81.57
PGSC0003DMT400042654	Potato	cytosol	80.92	81.08
AT1G80350.1	Thale cress	cytosol	81.7	81.07
Solyc06g066810.2.1	Tomato	cytosol	80.54	80.69
CDY37590	Canola	cytosol	78.42	79.65
KRH44395	Soybean	cytosol	81.31	79.17
KRH47511	Soybean	cytosol	80.92	79.1
KRH09800	Soybean	cytosol	72.83	79.08
CDY38662	Canola	cytosol	78.61	79.07
CDX79393	Canola	cytosol	79.77	78.26
Bra008479.1-P	Field mustard	cytosol	79.38	78.03
CDY57698	Canola	cytosol	79.58	77.78
Bra003561.1-P	Field mustard	cytosol	79.38	77.59
KXG19781	Sorghum	cytosol	77.84	75.94
GSMUA_Achr4P00810_001	Banana	cytosol	82.66	70.21
Zm00001d043841_P003	Maize	cytosol	92.1	52.88
Os01t0141100-02	Rice	cytosol, plasma membrane	26.2	44.88
Os01t0757400-02	Rice	cytosol	30.25	40.67
Os01t0673500-01	Rice	cytosol	31.21	39.51
Os02t0749150-01	Rice	mitochondrion	19.46	37.69
Os02t0159900-01	Rice	plasma membrane	27.75	33.26
Os11t0661400-01	Rice	cytosol	15.41	33.2
Os06t0225900-01	Rice	cytosol	22.93	32.43
Os01t0141300-00	Rice	cytosol	28.52	30.96
Os06t0130000-02	Rice	cytosol	28.71	30.6
Os06t0714500-01	Rice	plasma membrane	20.81	27.48
Os03t0344700-01	Rice	cytosol	26.98	18.06
Os01t0226400-01	Rice	plasma membrane	28.32	17.5
Os01t0623500-01	Rice	cytosol	27.36	17.49
Os05t0584600-02	Rice	vacuole	27.17	16.49
Os07t0672500-02	Rice	cytosol, plastid	26.78	12.86
Os12t0443800-01	Rice	nucleus	5.97	8.12

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.280	MapMan:13.4.4.2.1	Gene3D:3.40.50.300	EntrezGene:4324404	InterPro:AAA+_ATPase
EMBL:AK069248	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EMBL:AY327043	ProteinID:BAB86043.1	ProteinID:BAC01262.1
ProteinID:BAF05801.1	ProteinID:BAS73724.1	ProteinID:EAZ13110.1	GO:GO:0000166	GO:GO:0000226	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017
GO:GO:0008150	GO:GO:0008568	GO:GO:0009653	GO:GO:0009825	GO:GO:0009832	GO:GO:0009987
GO:GO:0010091	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787	GO:GO:0016887	GO:GO:0030154
GO:GO:0040007	GO:GO:0043622	GO:GO:0051013	InterPro:KATNA1	HAMAP:MF_03023	EnsemblPlantsGene:Os01g0683100
EnsemblPlants:Os01t0683100-01	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF19	UniProt:Q8S118	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI00000A0549	InterPro:Vps4_C
RefSeq:XP_015622511.1	SEG:seg	:	:	:	:

Description

katanin P60, Katanin catalytic subunit P60Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3) (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1). (Os01t0683100-01);Similar to LUE1 protein. (Os01t0683100-02)

Coordinates

chr1:+:28136367..28143339

Molecular Weight (calculated)

57000.2 Da

IEP (calculated)

7.742

GRAVY (calculated)

-0.559

Length

519 amino acids

Sequence
(BLAST)

001: MVSALAGLQD HLKLARDYAL EGLYDTSIIF FDGAIAQINK HLTTLDDALI RTKWLNCKKA ICDEVEIVKQ LDAQLKAFKE APGARRSSSP PIRSNNKSFV
101: FQPLDEYPTS SPAPFDDPDV WAPPRDTPNR RPTRGQSSTR KSSQDGAWAR GPSKTGTPSR GAKPNGSKGN SGARSSTASS TGGRKGKSSS SKADSVSSDA
201: EEGKSKKGQY EGPDMDLAAM LERDVLDSTP GVRWDDVAGL SEAKRLLEEA VVLPLWMPEY FQGIRRPWKG VLMFGPPGTG KTLLAKAVAT ECGTTFFNVS
301: SATLASKWRG ESERMVRCLF DLARFYAPST IFIDEIDSLC TSRGASGEHE SSRRVKSELL VQIDGVNNSS TTEDGQPKIV MVLAATNFPW DIDEALRRRL
401: EKRIYIPLPN FESRKALINI NLKTVEVATD VDIDEVARRT EGYSGDDLTN VCRDASMNGM RRKIAGKTRD EIKNMSKDEI SKDPVAMCDF EEALAKVQKS
501: VSPADIEKHE KWQAEFGSA

Best Arabidopsis Sequence Match ( AT1G80350.1 )
(BLAST)

001: MVGSSNSLAG LQDHLKLARE YALEGSYDTS VIFFDGAIAQ INKHLNTLDD PLARTKWMNV KKAIMEETEV VKQLDAERRA FKEAPTGRRA ASPPINTKSS
101: FVFQPLDEYP TSSGGGPMDD PDVWRPPTRD VTSRRPARAG QTGTRKSPQD GAWARGPTTR TGPASRGGRG GATSKSTAGA RSSTAGKKGA ASKSNKAESM
201: NGDAEDGKSK RGLYEGPDED LAAMLERDVL DSTPGVRWDD VAGLSEAKRL LEEAVVLPLW MPEYFQGIRR PWKGVLMFGP PGTGKTLLAK AVATECGTTF
301: FNVSSATLAS KWRGESERMV RCLFDLARAY APSTIFIDEI DSLCNSRGGS GEHESSRRVK SELLVQVDGV SNTATNEDGS RKIVMVLAAT NFPWDIDEAL
401: RRRLEKRIYI PLPDFESRKA LININLRTVE VASDVNIEDV ARRTEGYSGD DLTNVCRDAS MNGMRRKIAG KTRDEIKNMS KDDISNDPVA MCDFEEAIRK
501: VQPSVSSSDI EKHEKWLSEF GSA

Arabidopsis Description

AAA1Katanin p60 ATPase-containing subunit A1 [Source:UniProtKB/TrEMBL;Acc:Q0WR11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.