CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44395	Soybean	cytosol	97.93	97.56
KRH23518	Soybean	cytosol	38.79	89.96
VIT_09s0002g05260.t01	Wine grape	cytosol	86.82	88.48
AT1G80350.1	Thale cress	cytosol	83.05	84.32
KRH09800	Soybean	cytosol	75.52	83.89
PGSC0003DMT400042654	Potato	cytosol	81.54	83.59
Solyc06g066810.2.1	Tomato	cytosol	80.98	83.01
CDY37590	Canola	cytosol	79.28	82.39
CDY38662	Canola	cytosol	79.28	81.59
Os01t0683100-01	Rice	extracellular	79.1	80.92
CDX79393	Canola	cytosol	80.23	80.53
Bra008479.1-P	Field mustard	cytosol	80.04	80.49
Bra003561.1-P	Field mustard	cytosol	79.85	79.85
CDY57698	Canola	cytosol	79.66	79.66
EES01274	Sorghum	cytosol	77.78	79.58
TraesCS3D01G265900.1	Wheat	cytosol	77.78	79.27
TraesCS3B01G299100.1	Wheat	cytosol	77.78	79.27
TraesCS3A01G265700.1	Wheat	cytosol	77.78	79.27
Zm00001d011611_P005	Maize	cytosol	76.84	79.07
HORVU3Hr1G063300.1	Barley	cytosol	77.21	78.69
GSMUA_Achr4P00810_001	Banana	cytosol	80.41	69.89
KXG19781	Sorghum	cytosol	66.67	66.54
Zm00001d043841_P003	Maize	cytosol	77.02	45.24
KRH58481	Soybean	cytosol	29.76	39.21
KRH42362	Soybean	cytosol, endoplasmic reticulum	29.57	38.77
KRH08796	Soybean	cytosol	12.43	37.93
KRH26619	Soybean	nucleus	29.94	36.47
KRH30451	Soybean	cytosol	29.38	35.94
KRH25197	Soybean	cytosol	29.19	35.71
KRH22691	Soybean	cytosol	26.55	34.47
KRH00594	Soybean	cytosol, plastid	27.5	29.74
KRH40573	Soybean	cytosol, plastid	27.12	29.63
KRH08789	Soybean	cytosol	17.7	28.06
KRH53570	Soybean	endoplasmic reticulum, plasma membrane	20.53	27.81
KRH64362	Soybean	endoplasmic reticulum, plasma membrane	20.15	27.3
KRH15897	Soybean	endoplasmic reticulum	19.96	27.18
KRH57680	Soybean	nucleus	31.45	25.34
KRG94255	Soybean	nucleus	30.89	24.89
KRH57222	Soybean	cytosol	26.18	22.17
KRH08780	Soybean	extracellular, plasma membrane	26.55	17.26
KRH38312	Soybean	endoplasmic reticulum	26.55	17.26
KRH35220	Soybean	endoplasmic reticulum	25.42	16.69
KRH27876	Soybean	cytosol	26.37	16.69
KRH77598	Soybean	endoplasmic reticulum	25.99	16.45
KRH59989	Soybean	endoplasmic reticulum	25.99	16.43
KRH41256	Soybean	extracellular	26.18	16.3
KRG91604	Soybean	endoplasmic reticulum, plasma membrane	25.05	16.22
KRH71559	Soybean	cytosol	28.06	13.47
KRH24190	Soybean	mitochondrion	24.48	12.51
KRH31896	Soybean	nucleus	28.81	12.48
KRH29161	Soybean	cytosol, mitochondrion	24.29	12.43
KRH54195	Soybean	plastid	28.25	12.12
KRH31895	Soybean	nucleus	28.44	12.11
KRH63756	Soybean	cytosol, plastid	28.06	12.07
KRH03951	Soybean	nucleus	27.68	12.01
KRH71560	Soybean	nucleus	28.06	11.99

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.280	EntrezGene:100787634	MapMan:13.4.4.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
EMBL:ACUP02004154	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G034000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017
GO:GO:0008150	GO:GO:0008568	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0051013
UniProt:I1KH58	InterPro:KATNA1	EnsemblPlants:KRH47511	ProteinID:KRH47511	ProteinID:KRH47511.1	HAMAP:MF_03023
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF19
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI00023C836A	InterPro:Vps4_C	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:2658865..2663421

Molecular Weight (calculated)

57858.3 Da

IEP (calculated)

8.662

GRAVY (calculated)

-0.521

Length

531 amino acids

Sequence
(BLAST)

001: MVGGSLAGLQ EHLKLARDYA LEGLYDTSII FFDGALAQIN KHLSTVQDPL IRAKWMNVKK SLSEETEVVK QLDAERRAFK DNPIGRRPAS PPISVKSSSS
101: FVFQPLDEYP TSSSGSGPVD DPDVWRPPSR DTTSRRPARP GQVGARKSAQ DGAWARGATT RSGAAGRGAK AGATGRVNSG TRASTTGKKG GAASGKASKT
201: DAAAAAVTNG DAEDGKSKKP QYEGPDPELA AMLERDVLET SPGVRWDDVA GLTEAKRLLE EAVVLPLWMP EYFQGIRRPW KGVLMFGPPG TGKTLLAKAV
301: ATECGTTFFN VSSATLASKW RGESERMVRC LFDLARAYAP STIFIDEIDS LCNSRGASGE HESSRRVKSE LLVQVDGVSN SATNEDGSRK IVMVLAATNF
401: PWDIDEALRR RLEKRIYIPL PNFESRKELI RINLKTVEVA PDVNIDEVAR RTEGYSGDDL TNVCRDASLN GMRRKIAGKT RDEIKNMSKD EISKDPVAMC
501: DFEEALGKVQ RSVSQADIER HEKWFTEFGS A

Best Arabidopsis Sequence Match ( AT1G80350.1 )
(BLAST)

001: MVGSSNSLAG LQDHLKLARE YALEGSYDTS VIFFDGAIAQ INKHLNTLDD PLARTKWMNV KKAIMEETEV VKQLDAERRA FKEAPTGRRA ASPPINTKSS
101: FVFQPLDEYP TSSGGGPMDD PDVWRPPTRD VTSRRPARAG QTGTRKSPQD GAWARGPTTR TGPASRGGRG GATSKSTAGA RSSTAGKKGA ASKSNKAESM
201: NGDAEDGKSK RGLYEGPDED LAAMLERDVL DSTPGVRWDD VAGLSEAKRL LEEAVVLPLW MPEYFQGIRR PWKGVLMFGP PGTGKTLLAK AVATECGTTF
301: FNVSSATLAS KWRGESERMV RCLFDLARAY APSTIFIDEI DSLCNSRGGS GEHESSRRVK SELLVQVDGV SNTATNEDGS RKIVMVLAAT NFPWDIDEAL
401: RRRLEKRIYI PLPDFESRKA LININLRTVE VASDVNIEDV ARRTEGYSGD DLTNVCRDAS MNGMRRKIAG KTRDEIKNMS KDDISNDPVA MCDFEEAIRK
501: VQPSVSSSDI EKHEKWLSEF GSA

Arabidopsis Description

AAA1Katanin p60 ATPase-containing subunit A1 [Source:UniProtKB/TrEMBL;Acc:Q0WR11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.