Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09800 | Soybean | cytosol | 92.58 | 44.35 |
| KRH47511 | Soybean | cytosol | 89.96 | 38.79 |
| KRH44395 | Soybean | cytosol | 89.96 | 38.65 |
| KRH08796 | Soybean | cytosol | 25.76 | 33.91 |
| KRH58481 | Soybean | cytosol | 45.41 | 25.81 |
| KRH42362 | Soybean | cytosol, endoplasmic reticulum | 45.41 | 25.68 |
| KRH26619 | Soybean | nucleus | 44.1 | 23.17 |
| KRH30451 | Soybean | cytosol | 43.67 | 23.04 |
| KRH25197 | Soybean | cytosol | 43.67 | 23.04 |
| KRH22691 | Soybean | cytosol | 37.99 | 21.27 |
| KRH08789 | Soybean | cytosol | 31.0 | 21.19 |
| KRH00594 | Soybean | cytosol, plastid | 42.79 | 19.96 |
| KRH40573 | Soybean | cytosol, plastid | 42.36 | 19.96 |
| KRH53570 | Soybean | endoplasmic reticulum, plasma membrane | 32.31 | 18.88 |
| KRH64362 | Soybean | endoplasmic reticulum, plasma membrane | 32.31 | 18.88 |
| KRH15897 | Soybean | endoplasmic reticulum | 31.88 | 18.72 |
| KRH57680 | Soybean | nucleus | 41.48 | 14.42 |
| KRH57222 | Soybean | cytosol | 38.86 | 14.19 |
| KRG94255 | Soybean | nucleus | 40.61 | 14.11 |
| KRH35220 | Soybean | endoplasmic reticulum | 36.68 | 10.38 |
| KRH27876 | Soybean | cytosol | 37.55 | 10.25 |
| KRG91604 | Soybean | endoplasmic reticulum, plasma membrane | 36.68 | 10.24 |
| KRH77598 | Soybean | endoplasmic reticulum | 37.12 | 10.13 |
| KRH08780 | Soybean | extracellular, plasma membrane | 35.81 | 10.04 |
| KRH38312 | Soybean | endoplasmic reticulum | 35.37 | 9.91 |
| KRH59989 | Soybean | endoplasmic reticulum | 35.81 | 9.76 |
| KRH41256 | Soybean | extracellular | 35.81 | 9.61 |
| KRH29161 | Soybean | cytosol, mitochondrion | 37.55 | 8.29 |
| KRH24190 | Soybean | mitochondrion | 37.55 | 8.28 |
| KRH71559 | Soybean | cytosol | 39.3 | 8.14 |
| KRH63756 | Soybean | cytosol, plastid | 39.3 | 7.29 |
| KRH03951 | Soybean | nucleus | 38.86 | 7.27 |
| KRH31896 | Soybean | nucleus | 38.86 | 7.26 |
| KRH31895 | Soybean | nucleus | 39.3 | 7.22 |
| KRH54195 | Soybean | plastid | 38.86 | 7.19 |
| KRH71560 | Soybean | nucleus | 38.43 | 7.08 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A0R0GYQ0 | InterPro:AAA+_ATPase | EMBL:ACUP02008471 |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlantsGene:GLYMA_13G361600 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlants:KRH23518 | ProteinID:KRH23518 | ProteinID:KRH23518.1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF19 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0006EE1651 |
Description
hypothetical protein
Coordinates
chr13:+:44843004..44844853
Molecular Weight (calculated)
25726.6 Da
IEP (calculated)
5.256
GRAVY (calculated)
-0.457
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MRYDVYQGPD AELAEMLERD GCGIRRPWKG VIVFGPPGTG KTLLAKGVAT ECESERMVRC LFDLARAYAP STIFIDEIDS LCNARGASGE HESSRRVKSE
101: LLVQVDGVNN SSTNEDGTRK IVMVLAATNC PWDIDEALRR RLEKRIYIPL PNFESRKELI RINLRTVEVA PDVNIDEVAR RTEGYSGDDL TDVCRDASMN
201: GMRRKKVQPS VSLADIERHE KWFAEFGSA
101: LLVQVDGVNN SSTNEDGTRK IVMVLAATNC PWDIDEALRR RLEKRIYIPL PNFESRKELI RINLRTVEVA PDVNIDEVAR RTEGYSGDDL TDVCRDASMN
201: GMRRKKVQPS VSLADIERHE KWFAEFGSA
001: MVGSSNSLAG LQDHLKLARE YALEGSYDTS VIFFDGAIAQ INKHLNTLDD PLARTKWMNV KKAIMEETEV VKQLDAERRA FKEAPTGRRA ASPPINTKSS
101: FVFQPLDEYP TSSGGGPMDD PDVWRPPTRD VTSRRPARAG QTGTRKSPQD GAWARGPTTR TGPASRGGRG GATSKSTAGA RSSTAGKKGA ASKSNKAESM
201: NGDAEDGKSK RGLYEGPDED LAAMLERDVL DSTPGVRWDD VAGLSEAKRL LEEAVVLPLW MPEYFQGIRR PWKGVLMFGP PGTGKTLLAK AVATECGTTF
301: FNVSSATLAS KWRGESERMV RCLFDLARAY APSTIFIDEI DSLCNSRGGS GEHESSRRVK SELLVQVDGV SNTATNEDGS RKIVMVLAAT NFPWDIDEAL
401: RRRLEKRIYI PLPDFESRKA LININLRTVE VASDVNIEDV ARRTEGYSGD DLTNVCRDAS MNGMRRKIAG KTRDEIKNMS KDDISNDPVA MCDFEEAIRK
501: VQPSVSSSDI EKHEKWLSEF GSA
101: FVFQPLDEYP TSSGGGPMDD PDVWRPPTRD VTSRRPARAG QTGTRKSPQD GAWARGPTTR TGPASRGGRG GATSKSTAGA RSSTAGKKGA ASKSNKAESM
201: NGDAEDGKSK RGLYEGPDED LAAMLERDVL DSTPGVRWDD VAGLSEAKRL LEEAVVLPLW MPEYFQGIRR PWKGVLMFGP PGTGKTLLAK AVATECGTTF
301: FNVSSATLAS KWRGESERMV RCLFDLARAY APSTIFIDEI DSLCNSRGGS GEHESSRRVK SELLVQVDGV SNTATNEDGS RKIVMVLAAT NFPWDIDEAL
401: RRRLEKRIYI PLPDFESRKA LININLRTVE VASDVNIEDV ARRTEGYSGD DLTNVCRDAS MNGMRRKIAG KTRDEIKNMS KDDISNDPVA MCDFEEAIRK
501: VQPSVSSSDI EKHEKWLSEF GSA
Arabidopsis Description
AAA1Katanin p60 ATPase-containing subunit A1 [Source:UniProtKB/TrEMBL;Acc:Q0WR11]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.