Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH57222 Soybean cytosol 50.98 99.52
KRH63756 Soybean cytosol, plastid 83.33 82.66
KRH54195 Soybean plastid 82.92 81.99
VIT_17s0000g01550.t01 Wine grape cytosol, plastid 74.59 75.08
Solyc06g071980.2.1 Tomato cytosol 42.16 67.89
Solyc03g110900.2.1 Tomato nucleus 65.28 66.86
KRH08796 Soybean cytosol 8.42 59.2
KRH71559 Soybean cytosol 52.45 58.05
CDX92656 Canola cytosol 20.42 58.0
Solyc06g072000.1.1 Tomato plastid 47.71 56.86
KRH31895 Soybean nucleus 56.45 55.41
KRH71560 Soybean nucleus 56.21 55.35
KRH31896 Soybean nucleus 55.23 55.14
AT1G62130.1 Thale cress cytosol, plastid 45.34 53.21
AT4G24860.1 Thale cress cytosol, plastid 48.28 52.67
KRH08789 Soybean cytosol 12.91 47.16
KRH64362 Soybean endoplasmic reticulum, plasma membrane 13.64 42.6
KRH53570 Soybean endoplasmic reticulum, plasma membrane 13.64 42.6
KRH15897 Soybean endoplasmic reticulum 13.4 42.05
KRH08780 Soybean extracellular, plasma membrane 27.04 40.51
KRH27876 Soybean cytosol 27.61 40.29
KRH38312 Soybean endoplasmic reticulum 26.8 40.15
KRH77598 Soybean endoplasmic reticulum 27.12 39.57
KRH35220 Soybean endoplasmic reticulum 26.06 39.43
KRH41256 Soybean extracellular 27.29 39.16
KRG91604 Soybean endoplasmic reticulum, plasma membrane 26.23 39.15
KRH59989 Soybean endoplasmic reticulum 26.72 38.93
KRH23518 Soybean cytosol 7.27 38.86
KRH24190 Soybean mitochondrion 27.45 32.34
KRH29161 Soybean cytosol, mitochondrion 27.37 32.27
KRH58481 Soybean cytosol 10.54 32.01
KRH42362 Soybean cytosol, endoplasmic reticulum 10.46 31.6
KRH09800 Soybean cytosol 11.36 29.08
KRH40573 Soybean cytosol, plastid 11.52 29.01
KRH00594 Soybean cytosol, plastid 11.52 28.72
KRH47511 Soybean cytosol 12.01 27.68
KRH30451 Soybean cytosol 9.8 27.65
KRH44395 Soybean cytosol 12.01 27.58
KRH26619 Soybean nucleus 9.8 27.52
KRH25197 Soybean cytosol 9.72 27.42
KRH57680 Soybean nucleus 14.46 26.86
KRG94255 Soybean nucleus 14.22 26.4
KRH22691 Soybean cytosol 8.42 25.18
Protein Annotations
Gene3D:1.10.8.60EntrezGene:100816731Gene3D:2.60.200.20Gene3D:3.40.50.300MapMan:35.1InterPro:AAA+_ATPase
EMBL:ACUP02010369InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_corencoils:CoilInterPro:FHA_domEnsemblPlantsGene:GLYMA_17G129200
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0016787GO:GO:0016887
InterPro:IPR000253UniProt:K7MLF2EnsemblPlants:KRH03951ProteinID:KRH03951ProteinID:KRH03951.1InterPro:P-loop_NTPase
PFAM:PF00004PFAM:PF00498ScanProsite:PS00674PANTHER:PTHR23074PANTHER:PTHR23074:SF84SMART:SM00382
InterPro:SMAD_FHA_dom_sfSUPFAM:SSF49879SUPFAM:SSF52540UniParc:UPI0002955C1ASEG:seg:
Description
hypothetical protein
Coordinates
chr17:-:10349748..10362166
Molecular Weight (calculated)
132700.0 Da
IEP (calculated)
6.578
GRAVY (calculated)
-0.349
Length
1224 amino acids
Sequence
(BLAST)
0001: MVSTRRSGSL SAKRSSSSED KSPSPKRQKV DNGGSSEKSV PTPAENSKDL SSPEPVPDPG ECGSGDAQIA GAGAADGVSS GKGDATPAVP VTAPIADAAC
0101: PSFSSWINYQ KQNPNIEGAP WCRFLSQSAQ NPNVAVCTPI FTIGSNRSCN FPLNDQTISG NLCKIKHTQG DGSAVAVLES MGSKGSVLVN GTHVKKNTSC
0201: VLNSGDEVVF GVLGNHSYIF QQLNTEVAVR GAEVQSGIGK FLPLERRSGD PSAVDGASIL ASLSNRQDLT RWKSPSQTSS KPHQGTDVSS RSVHHDCTET
0301: ELDGSESTPN VRSDKAAEVR TSDKNSTMDC NPDAGAEAGN VKISGVNDFL RPFFRILAQP SCKLKLSRSI CKQVLEERNG TLDMQAASTL GTSVRCAVFK
0401: ADVHAAILDG KEIDASFDNF PYYLSENTKN VLVAACFMHL RHKEHEKFTA DLTTINPRIL LSGPAGSEIY QEMLVKALAK YFGAKLLIFD SHLLLGGLSS
0501: KEAELLKDGL NAEKSFGCTK LSPTEDMARI MDPLASEIET PSPSNAPTSY GFESQPKLET DNMPSTSGTA KSCSFKLGDR VKFSCSSSCG VYQTSPRGPS
0601: NGSRGKVVLL FDDNPLSKIG VRFDKPIPDG VDLGGACEGG QGFFCNVTDL RLESSAVEEL DKLLIHSLFE VVFSESRSAP FILFMKDAEK SIVGNGDSHS
0701: FKSKLENLPD NVVVIGSHTQ NDSRKEKSHP GGLLFTKFGS NQTALLDLAF PDSFGRLHDR GKEAPKQNRT LTKLFPNKIT IHMPQDEALL ASWKQQLDRD
0801: VETLKIKGNL HHLRTVLGRC GMECEGLETL CIKDQTLTNE NAEKIIGWAL SHHLMQNSEA KPDSKLVLSC ESILYGIGIL QSIQNESKSL KKSLKDVVTE
0901: NEFEKRLLAD VIPPSDIDVT FDDIGALEKV KDTLKELVML PLQRPELFCK GQLTKPCKGI LLFGPPGTGK TMLAKAIATE AGANFINISM SSITSKWFGE
1001: GEKYVKAVFS LASKISPSVI FVDEVDSMLG RRENPGEHEA MRKMKNEFMV NWDGLRTKET ERVLVLAATN RPFDLDEAVI RRMPRRLMVN LPDAPNRAKI
1101: LKVILAKEEL SPDVDLDAVA SMTDGYSGSD LKNLCVTAAH RPIKEILEKE KKERAAALAE GQPAPALCSS GDVRSLNMED FKYAHQQVCA SVSSESVNMT
1201: ELLQWNELYG EGGSRVKKAL SYFM
Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.