CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42362	Soybean	cytosol, endoplasmic reticulum	96.28	95.8
VIT_10s0003g03500.t01	Wine grape	cytosol	79.65	80.86
Solyc02g070440.2.1	Tomato	cytosol	74.19	77.46
EES01499	Sorghum	cytosol	73.2	77.43
Os01t0757400-02	Rice	cytosol	73.7	76.94
PGSC0003DMT400054532	Potato	cytosol	73.95	76.8
TraesCS3B01G305600.2	Wheat	cytosol	74.94	76.46
CDX84641	Canola	cytosol	70.97	76.27
HORVU3Hr1G072910.6	Barley	cytosol	70.72	75.8
GSMUA_Achr7P25300_001	Banana	cytosol	76.43	75.68
TraesCS3A01G294400.1	Wheat	cytosol	70.97	75.66
CDX79566	Canola	cytosol	70.22	75.27
TraesCS3A01G271900.1	Wheat	cytosol	74.44	75.0
CDY17260	Canola	cytosol	71.22	74.93
Bra005414.1-P	Field mustard	cytosol	72.7	74.74
GSMUA_Achr10P...	Banana	cytosol	71.71	74.68
TraesCS3D01G271500.1	Wheat	cytosol	73.95	74.5
TraesCS3B01G329000.2	Wheat	cytosol	70.97	73.9
CDX84306	Canola	cytosol	70.72	73.83
AT2G34560.2	Thale cress	cytosol	71.71	73.54
OQU87315	Sorghum	cytosol	73.45	73.45
Os01t0673500-01	Rice	cytosol	74.19	72.93
Zm00001d043410_P002	Maize	cytosol	73.2	71.08
TraesCS3D01G294200.1	Wheat	plastid	70.97	64.56
HORVU3Hr1G061800.1	Barley	cytosol, plastid	73.95	64.09
Zm00001d011563_P019	Maize	mitochondrion	73.7	56.57
Bra022979.1-P	Field mustard	plastid	69.23	48.35
KRH23518	Soybean	cytosol	25.81	45.41
KRH08796	Soybean	cytosol	17.62	40.8
KRH26619	Soybean	nucleus	36.97	34.17
KRH25197	Soybean	cytosol	35.98	33.41
KRH30451	Soybean	cytosol	35.73	33.18
KRH22691	Soybean	cytosol	32.26	31.78
KRH09800	Soybean	cytosol	36.72	30.96
KRH00594	Soybean	cytosol, plastid	36.48	29.94
KRH47511	Soybean	cytosol	39.21	29.76
KRH15897	Soybean	endoplasmic reticulum	28.78	29.74
KRH40573	Soybean	cytosol, plastid	35.73	29.63
KRH64362	Soybean	endoplasmic reticulum, plasma membrane	28.78	29.59
KRH44395	Soybean	cytosol	38.71	29.27
KRH53570	Soybean	endoplasmic reticulum, plasma membrane	28.29	29.08
KRH08789	Soybean	cytosol	23.82	28.66
KRG94255	Soybean	nucleus	36.72	22.46
KRH57680	Soybean	nucleus	36.72	22.46
KRH57222	Soybean	cytosol	31.76	20.41
KRH38312	Soybean	endoplasmic reticulum	32.51	16.03
KRH08780	Soybean	extracellular, plasma membrane	32.51	16.03
KRH35220	Soybean	endoplasmic reticulum	30.27	15.08
KRH77598	Soybean	endoplasmic reticulum	30.77	14.78
KRH59989	Soybean	endoplasmic reticulum	30.77	14.76
KRG91604	Soybean	endoplasmic reticulum, plasma membrane	30.02	14.76
KRH27876	Soybean	cytosol	30.52	14.66
KRH41256	Soybean	extracellular	30.77	14.54
KRH71559	Soybean	cytosol	33.99	12.39
KRH29161	Soybean	cytosol, mitochondrion	30.27	11.75
KRH24190	Soybean	mitochondrion	30.27	11.74
KRH71560	Soybean	nucleus	34.74	11.26
KRH31896	Soybean	nucleus	34.24	11.26
KRH63756	Soybean	cytosol, plastid	34.24	11.18
KRH54195	Soybean	plastid	34.24	11.15
KRH31895	Soybean	nucleus	34.49	11.15
KRH03951	Soybean	nucleus	32.01	10.54

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100794098	Gene3D:3.40.50.300	MapMan:50.3.6	InterPro:AAA+_ATPase	EMBL:ACUP02003265
InterPro:ATPase_AAA_core	EnsemblPlantsGene:GLYMA_05G130700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787
GO:GO:0016887	UniProt:I1K345	EnsemblPlants:KRH58481	ProteinID:KRH58481	ProteinID:KRH58481.1	InterPro:P-loop_NTPase
PFAM:PF00004	PANTHER:PTHR23074	PANTHER:PTHR23074:SF92	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000233A870
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:32376592..32384905

Molecular Weight (calculated)

45356.5 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.411

Length

403 amino acids

Sequence
(BLAST)

001: MADDPMPTRW SFQDFKLYYD AKFGRKKVAE NGDTATDKAV SNGNSVTVTI VSNGNKRASE MAVYEQFRGE GLNQIHTNGF VPTIVDERPQ KSLLPPFESA
101: EMRALAESLS RDIIRGSPDV KWESIKGLEN AKRLLKEAVV MPIKYPKYFT GLLSPWKGIL LFGPPGTGKT MLAKAVATEC KTTFFNISAS SVVSKWRGDS
201: EKLVKVLFEL ARHHAPSTIF LDEIDAIISQ RGEARSEHEA SRRLKTELLI QMDGLTKTDE LVFVLAATNL PWELDAAMLR RLEKRILVPL PEPVARRAMF
301: EELLPQQPDE EPIPYDILVD KTEGYSGSDI RLLCKETAMQ PLRRLMSQLE QSQDVVPEEE LPKVGPIKSE DIETALRNTR PSAHLHAHKY DKFNADYGSQ
401: ILQ

Best Arabidopsis Sequence Match ( AT2G34560.2 )
(BLAST)

001: MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.