Factsheet for TraesCS3A01G294400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G072910.6	Barley	cytosol	97.35	97.87
TraesCS3B01G329000.2	Wheat	cytosol	98.94	96.64
EES01499	Sorghum	cytosol	91.27	90.55
Os01t0757400-02	Rice	cytosol	92.33	90.41
TraesCS3D01G294200.1	Wheat	plastid	99.74	85.1
Zm00001d043410_P002	Maize	cytosol	91.01	82.89
TraesCS3A01G271900.1	Wheat	cytosol	78.31	74.0
GSMUA_Achr7P25300_001	Banana	cytosol	78.84	73.22
Solyc02g070440.2.1	Tomato	cytosol	72.75	71.24
KRH58481	Soybean	cytosol	75.66	70.97
PGSC0003DMT400054532	Potato	cytosol	72.49	70.62
VIT_10s0003g03500.t01	Wine grape	cytosol	74.07	70.53
KRH42362	Soybean	cytosol, endoplasmic reticulum	75.4	70.37
CDX84641	Canola	cytosol	68.78	69.33
CDX79566	Canola	cytosol	68.52	68.88
CDY17260	Canola	cytosol	69.31	68.41
CDX84306	Canola	cytosol	69.31	67.88
Bra005414.1-P	Field mustard	cytosol	69.58	67.09
AT2G34560.2	Thale cress	cytosol	68.25	65.65
Bra022979.1-P	Field mustard	plastid	69.31	45.41
TraesCS3A01G054100.1	Wheat	cytosol	37.57	32.42
TraesCS6A01G133300.1	Wheat	cytosol	36.24	31.28
TraesCS7A01G384900.1	Wheat	endoplasmic reticulum	30.42	30.83
TraesCS7A01G065800.1	Wheat	cytosol	38.89	30.62
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.62	30.42
TraesCS3A01G265700.1	Wheat	cytosol	40.48	29.37
TraesCS5A01G109500.1	Wheat	nucleus	37.3	20.49
TraesCS3A01G225200.3	Wheat	cytosol	33.07	15.49
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	32.54	14.64
TraesCS1A01G423100.1	Wheat	mitochondrion	32.01	14.2
TraesCS7A01G184700.1	Wheat	mitochondrion	34.39	13.39
TraesCS7A01G128400.2	Wheat	cytosol, plastid	34.13	12.72
TraesCS6A01G305500.1	Wheat	mitochondrion	32.54	12.51
TraesCS4A01G142800.3	Wheat	cytosol	35.19	12.1
TraesCS2A01G113900.1	Wheat	cytosol	34.66	11.9
TraesCS4A01G169300.15	Wheat	plastid	34.39	10.54

Protein Annotations

EnsemblPlants:TraesCS3A01G294400.1	EnsemblPlantsGene:TraesCS3A01G294400	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23074
PANTHER:PTHR23074:SF92	PFAM:PF00004	SEG:seg	SMART:SM00382	SUPFAM:SSF52540	TIGR:cd00009
MapMan:50.3.6	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:528520498..528526733

Molecular Weight (calculated)

42302.0 Da

IEP (calculated)

5.978

GRAVY (calculated)

-0.339

Length

378 amino acids

Sequence
(BLAST)

001: MDLRAFFGGK KQEPEQNGHA NGAAPNGGVK KRTADLAIYE QYEQQARQPE MRAAAIRDGN ADVIQKPLLP QFESAEMRNL AETLLRDIIR GSPDVQWESI
101: KGLETAKRLL KEAVVMPIKY PKYFTGLLSP WKGILLFGPP GTGKTMLAKA VATECNTTFF NISASSIVSK WRGDSEKLVK VLFELARHHA PSTIFLDEID
201: AIISQRGEAR SEHEASRRLK TELLIQMDGL TKTNDLVFVL AATNLPWELD AAMLRRLEKR ILVPLPEAEA RQAMFKELLP AMTSNLEVPY DILVEKTEGY
301: SGSDIRLVCK EAAMQPLRRL MSVLEASDEL VPEEELPEVG PLKPEDVELA LSNTRPSAHL QAHRYEKFNQ DYGSHILS

Best Arabidopsis Sequence Match ( AT2G34560.1 )
(BLAST)

001: MATDEPSQTR WSFLFGRKKL PEEDVSNKDQ PEDGSSNGNN GDVNNNSSPV TNQDGNTALA NGNVIREKPK KSMFPPFESA ETRTLAESLS RDIIRGNPNI
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.