CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0757400-02	Rice	cytosol	95.8	94.56
TraesCS3A01G294400.1	Wheat	cytosol	90.55	91.27
HORVU3Hr1G072910.6	Barley	cytosol	88.45	89.63
TraesCS3B01G329000.2	Wheat	cytosol	90.55	89.15
Zm00001d043410_P002	Maize	cytosol	95.01	87.23
OQU87315	Sorghum	cytosol	82.15	77.67
TraesCS3D01G294200.1	Wheat	plastid	90.29	77.65
GSMUA_Achr7P25300_001	Banana	cytosol	80.84	75.68
KRH58481	Soybean	cytosol	77.43	73.2
KRH42362	Soybean	cytosol, endoplasmic reticulum	76.64	72.1
VIT_10s0003g03500.t01	Wine grape	cytosol	74.8	71.79
Solyc02g070440.2.1	Tomato	cytosol	70.87	69.95
PGSC0003DMT400054532	Potato	cytosol	70.87	69.59
CDX84641	Canola	cytosol	68.24	69.33
CDY17260	Canola	cytosol	69.29	68.93
CDX79566	Canola	cytosol	67.98	68.88
CDX84306	Canola	cytosol	69.29	68.39
Bra005414.1-P	Field mustard	cytosol	70.08	68.11
AT2G34560.2	Thale cress	cytosol	69.03	66.92
Bra022979.1-P	Field mustard	plastid	69.29	45.75
EES00346	Sorghum	cytosol	37.53	32.8
EER87773	Sorghum	cytosol	37.27	28.98
EES01274	Sorghum	cytosol	39.11	28.71
KXG20883	Sorghum	endoplasmic reticulum	29.4	28.64
KXG19781	Sorghum	cytosol	35.96	25.75
KXG23422	Sorghum	nucleus	36.75	20.35
KXG32842	Sorghum	cytosol	32.28	15.87
EES20020	Sorghum	endoplasmic reticulum	33.33	15.08
EES00021	Sorghum	endoplasmic reticulum	32.81	14.76
KXG32925	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	31.5	14.46
OQU76102	Sorghum	mitochondrion	33.6	13.22
EES05524	Sorghum	plastid	33.33	12.87
EES16128	Sorghum	cytosol, plastid	30.45	12.45
OQU90457	Sorghum	cytosol, plastid	34.91	12.16
EER92288	Sorghum	cytosol	35.17	12.07
OQU79278	Sorghum	cytosol, plastid	28.61	11.82
KXG29076	Sorghum	plastid	34.12	10.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:50.3.6	EntrezGene:8072095	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
UniProt:C5XKR6	EnsemblPlants:EES01499	ProteinID:EES01499	ProteinID:EES01499.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0016787	GO:GO:0016887	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR23074
PANTHER:PTHR23074:SF92	SMART:SM00382	EnsemblPlantsGene:SORBI_3003G300900	SUPFAM:SSF52540	unigene:Sbi.8313	UniParc:UPI0001A84A27
RefSeq:XP_002456379.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:63191218..63195891

Molecular Weight (calculated)

42828.5 Da

IEP (calculated)

6.209

GRAVY (calculated)

-0.366

Length

381 amino acids

Sequence
(BLAST)

001: MDFKGFWESR FGGKKEPEEQ NGHANGSVPK RTSDLAVYEQ FEQQARQTQV RAAAIRDGNA DVIQKPLLPS FESAEMRNLA ETLLRDIIRG SPDVKWESIK
101: GLENAKRLLK EAVVMPIKYP KYFTGLLSPW KGILLFGPPG TGKTMLAKAV ATECKTTFFN ISASSIVSKW RGDSEKLVKV LFELARHHAP STIFLDEIDA
201: IISQRGEARS EHEASRRLKT ELLIQMDGLT KTNDLVFVLA ATNLPWELDA AMLRRLEKRI LVPLPEAEAR QAMFEELLPA TTSKLEVPYN ILVEKTEGYS
301: GSDIRLVCKE AAMQPLRRLM SVLEASDELV PEEELPEVGP LKPEDIELAL RNTRPSAHLH AHRYEKFNQD YGSQVLCSES A

Best Arabidopsis Sequence Match ( AT2G34560.2 )
(BLAST)

001: MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.