Factsheet for GSMUA_Achr7P25300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01499	Sorghum	cytosol	75.68	80.84
Os01t0757400-02	Rice	cytosol	76.66	80.83
GSMUA_Achr10P...	Banana	cytosol	75.18	79.07
TraesCS3A01G294400.1	Wheat	cytosol	73.22	78.84
HORVU3Hr1G072910.6	Barley	cytosol	72.73	78.72
TraesCS3B01G329000.2	Wheat	cytosol	73.22	77.0
KRH58481	Soybean	cytosol	75.68	76.43
VIT_10s0003g03500.t01	Wine grape	cytosol	74.45	76.32
KRH42362	Soybean	cytosol, endoplasmic reticulum	75.92	76.3
Solyc02g070440.2.1	Tomato	cytosol	70.76	74.61
Zm00001d043410_P002	Maize	cytosol	75.18	73.73
PGSC0003DMT400054532	Potato	cytosol	70.02	73.45
CDX84641	Canola	cytosol	67.08	72.8
CDY17260	Canola	cytosol	67.57	71.8
CDX79566	Canola	cytosol	66.09	71.54
Bra005414.1-P	Field mustard	cytosol	68.8	71.43
CDX84306	Canola	cytosol	67.57	71.24
AT2G34560.2	Thale cress	cytosol	68.06	70.48
TraesCS3D01G294200.1	Wheat	plastid	73.46	67.49
Bra022979.1-P	Field mustard	plastid	66.83	47.14
GSMUA_Achr4P24320_001	Banana	cytosol	35.38	35.29
GSMUA_Achr2P22550_001	Banana	cytosol	35.38	34.95
GSMUA_Achr3P01430_001	Banana	cytosol	35.14	34.79
GSMUA_Achr6P09890_001	Banana	cytosol	25.55	34.21
GSMUA_Achr11P...	Banana	cytosol	24.32	31.33
GSMUA_Achr11P...	Banana	cytosol	24.08	30.91
GSMUA_Achr11P...	Banana	endoplasmic reticulum	28.01	29.38
GSMUA_Achr4P05220_001	Banana	endoplasmic reticulum	27.76	29.12
GSMUA_Achr10P...	Banana	cytosol	34.64	27.12
GSMUA_Achr4P00810_001	Banana	cytosol	39.31	26.19
GSMUA_Achr6P27610_001	Banana	cytosol	35.38	21.98
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	30.96	19.33
GSMUA_Achr11P...	Banana	cytosol	31.2	18.01
GSMUA_Achr7P14270_001	Banana	cytosol	29.73	17.11
GSMUA_Achr11P...	Banana	cytosol	30.22	13.68
GSMUA_Achr8P33760_001	Banana	cytosol	32.19	11.87
GSMUA_Achr7P07310_001	Banana	mitochondrion	29.98	11.63
GSMUA_Achr8P10090_001	Banana	cytosol	30.71	11.5
GSMUA_Achr3P00740_001	Banana	mitochondrion	31.94	11.33

Protein Annotations

EnsemblPlants:GSMUA_Achr7P25300_001	EnsemblPlants:GSMUA_Achr7T25300_001	EnsemblPlantsGene:GSMUA_Achr7G25300_001	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23074	PANTHER:PTHR23074:SF92	PFAM:PF00004	SEG:seg	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI0002957901	UniProt:M0TKL6	MapMan:50.3.6	:	:	:

Description

AAA-type ATPase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G25300_001]

Coordinates

chr7:-:26979389..26989203

Molecular Weight (calculated)

45741.9 Da

IEP (calculated)

6.646

GRAVY (calculated)

-0.408

Length

407 amino acids

Sequence
(BLAST)

001: MEDRPSLTRW SFEDFKLFYD VRLGRKRLSK GEAEEEASSG SRYGGIRANG TVTANGSVKP SSDLAVYEQF ERQERKIEPR AGAISDRGQE TTPQRSLLPP
101: FESAEMRTLA ETLCRDIVRG SPDVKWESIK GLENAKRLLK EAVVMPIKYP KYFTGLLSPW KGILLFGPPG TGKTMLAKAV ATECKTTFFN ISASSIVSKW
201: RGDSEKLVRV LFELARHHAP STIFLDELDA IISQRGEARS EHEASRRLKT ELLIQMDGLT KTDVLVFVLA ATNLPWELDA AMLRRLEKRI LVPLPEPEAR
301: CAMFEELLPS APGEAGIPYD FLVERTEGYS GSDIRLVCKE AAMQPLRRLM MVLEGRQDNV PEEELPEVGP VTPGDIELAL KNTRPSAHLH AHRYEKFNQD
401: YGSQILH

Best Arabidopsis Sequence Match ( AT2G34560.2 )
(BLAST)

001: MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.