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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G294400.1 Wheat cytosol 97.87 97.35
TraesCS3B01G329000.2 Wheat cytosol 96.81 94.06
Os01t0757400-02 Rice cytosol 91.22 88.86
EES01499 Sorghum cytosol 89.63 88.45
TraesCS3D01G294200.1 Wheat plastid 98.67 83.75
Zm00001d043410_P002 Maize cytosol 90.16 81.69
GSMUA_Achr7P25300_001 Banana cytosol 78.72 72.73
Solyc02g070440.2.1 Tomato cytosol 73.14 71.24
VIT_10s0003g03500.t01 Wine grape cytosol 74.73 70.78
KRH58481 Soybean cytosol 75.8 70.72
PGSC0003DMT400054532 Potato cytosol 72.87 70.62
KRH42362 Soybean cytosol, endoplasmic reticulum 75.53 70.12
CDX84641 Canola cytosol 68.62 68.8
CDX79566 Canola cytosol 68.35 68.35
CDY17260 Canola cytosol 68.88 67.62
CDX84306 Canola cytosol 68.88 67.1
Bra005414.1-P Field mustard cytosol 69.15 66.33
AT2G34560.2 Thale cress cytosol 67.82 64.89
HORVU3Hr1G061800.1 Barley cytosol, plastid 78.72 63.66
Bra022979.1-P Field mustard plastid 68.88 44.89
HORVU6Hr1G038660.1 Barley cytosol, mitochondrion 16.22 34.27
HORVU4Hr1G059020.1 Barley cytosol, endoplasmic reticulum 20.48 31.95
HORVU4Hr1G059040.2 Barley cytosol 20.74 30.95
HORVU3Hr1G063300.1 Barley cytosol 40.69 29.37
HORVU3Hr1G072480.2 Barley cytosol 19.68 29.37
HORVU0Hr1G021880.1 Barley endoplasmic reticulum 30.59 29.19
HORVU7Hr1G026880.14 Barley cytosol 34.04 27.53
HORVU5Hr1G104980.1 Barley endoplasmic reticulum, mitochondrion 20.74 27.27
HORVU3Hr1G010300.1 Barley cytosol, plastid 37.23 26.72
HORVU7Hr1G091480.2 Barley plastid 30.59 26.62
HORVU7Hr1G013190.8 Barley plastid 38.56 25.94
HORVU5Hr1G029910.10 Barley cytosol, mitochondrion, nucleus 36.97 19.5
HORVU3Hr1G055830.5 Barley cytosol 32.98 15.35
HORVU3Hr1G030770.20 Barley cytosol, vacuole 32.71 14.63
HORVU1Hr1G092440.13 Barley cytosol, golgi, mitochondrion, plastid 32.18 13.96
HORVU7Hr1G037870.1 Barley plastid 35.11 12.7
HORVU6Hr1G075440.6 Barley mitochondrion 32.98 12.58
HORVU2Hr1G019730.5 Barley cytosol, plastid 34.84 12.48
HORVU4Hr1G046420.6 Barley cytosol, plastid 34.84 11.34
HORVU4Hr1G033300.1 Barley cytosol 34.84 10.12
Protein Annotations
EnsemblPlants:HORVU3Hr1G072910.6EnsemblPlantsGene:HORVU3Hr1G072910Gene3D:1.10.8.60Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005524InterPro:AAA+_ATPaseInterPro:ATPase_AAA_coreInterPro:P-loop_NTPasePANTHER:PTHR23074
PANTHER:PTHR23074:SF92PFAM:PF00004SEG:segSMART:SM00382SUPFAM:SSF52540UniParc:UPI000B46D151
UniProt:A0A287LM51MapMan:50.3.6::::
Description
No Description!
Coordinates
chrchr3H:-:549897686..549903697
Molecular Weight (calculated)
42244.9 Da
IEP (calculated)
6.336
GRAVY (calculated)
-0.356
Length
376 amino acids
Sequence
(BLAST)
001: PSFQDLRAFF GGKKQEPEQN GHANGGVKKR TADLAIYEQY EQQARQPEMR AAAIRDGNAD VIQKPLLPQF ESAEMRNLAE TLLRDIIRGS PDVQWESIKG
101: LETAKRLLKE AVVMPIKYPK YFTGLLSPWK GILLFGPPGT GKTMLAKAVA TECNTTFFNI SASSIVSKWR GDSEKLVKVL FELARHHAPS TIFLDEIDAI
201: ISQRGEARSE HEASRRLKTE LLIQMDGLTK TKDLVFVLAA TNLPWELDAA MLRRLEKRIL VPLPEAEARH SMFKELLPAM TSNLEVPYDI LVEKTEGYSG
301: SDIRLVCKEA AMQPLRRLMS VLEASDELVP EEELPEVGPL KPDDVELALS NTRPSAHLQA HRYEKFNQDY GSHILS
Best Arabidopsis Sequence Match ( AT1G80350.1 )
(BLAST)
001: MVGSSNSLAG LQDHLKLARE YALEGSYDTS VIFFDGAIAQ INKHLNTLDD PLARTKWMNV KKAIMEETEV VKQLDAERRA FKEAPTGRRA ASPPINTKSS
101: FVFQPLDEYP TSSGGGPMDD PDVWRPPTRD VTSRRPARAG QTGTRKSPQD GAWARGPTTR TGPASRGGRG GATSKSTAGA RSSTAGKKGA ASKSNKAESM
201: NGDAEDGKSK RGLYEGPDED LAAMLERDVL DSTPGVRWDD VAGLSEAKRL LEEAVVLPLW MPEYFQGIRR PWKGVLMFGP PGTGKTLLAK AVATECGTTF
301: FNVSSATLAS KWRGESERMV RCLFDLARAY APSTIFIDEI DSLCNSRGGS GEHESSRRVK SELLVQVDGV SNTATNEDGS RKIVMVLAAT NFPWDIDEAL
401: RRRLEKRIYI PLPDFESRKA LININLRTVE VASDVNIEDV ARRTEGYSGD DLTNVCRDAS MNGMRRKIAG KTRDEIKNMS KDDISNDPVA MCDFEEAIRK
501: VQPSVSSSDI EKHEKWLSEF GSA
Arabidopsis Description
AAA1Katanin p60 ATPase-containing subunit A1 [Source:UniProtKB/TrEMBL;Acc:Q0WR11]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.