Factsheet for HORVU3Hr1G061800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G305600.2	Wheat	cytosol	81.51	95.95
TraesCS3A01G271900.1	Wheat	cytosol	82.37	95.75
TraesCS3D01G271500.1	Wheat	cytosol	81.72	95.0
Os01t0673500-01	Rice	cytosol	75.48	85.61
OQU87315	Sorghum	cytosol	72.9	84.12
HORVU3Hr1G072910.6	Barley	cytosol	63.66	78.72
GSMUA_Achr10P...	Banana	cytosol	62.8	75.45
Solyc02g070440.2.1	Tomato	cytosol	62.15	74.87
PGSC0003DMT400054532	Potato	cytosol	61.94	74.23
KRH58481	Soybean	cytosol	64.09	73.95
KRH42362	Soybean	cytosol, endoplasmic reticulum	63.66	73.09
VIT_10s0003g03500.t01	Wine grape	cytosol	61.94	72.54
CDX84641	Canola	cytosol	58.06	72.0
CDY17260	Canola	cytosol	58.71	71.28
CDX79566	Canola	cytosol	57.63	71.28
Bra005414.1-P	Field mustard	cytosol	59.57	70.66
CDX84306	Canola	cytosol	58.49	70.47
AT2G34560.2	Thale cress	cytosol	58.71	69.47
Zm00001d011563_P019	Maize	mitochondrion	77.2	68.38
Bra022979.1-P	Field mustard	plastid	59.78	48.18
HORVU3Hr1G063300.1	Barley	cytosol	34.84	31.09
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	11.83	30.9
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	15.48	29.88
HORVU3Hr1G010300.1	Barley	cytosol, plastid	32.26	28.63
HORVU4Hr1G059040.2	Barley	cytosol	15.48	28.57
HORVU0Hr1G021880.1	Barley	endoplasmic reticulum	23.23	27.41
HORVU3Hr1G072480.2	Barley	cytosol	14.62	26.98
HORVU7Hr1G026880.14	Barley	cytosol	26.67	26.67
HORVU7Hr1G013190.8	Barley	plastid	31.61	26.3
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	15.91	25.87
HORVU7Hr1G091480.2	Barley	plastid	23.23	25.0
HORVU5Hr1G029910.10	Barley	cytosol, mitochondrion, nucleus	30.75	20.06
HORVU3Hr1G055830.5	Barley	cytosol	28.39	16.34
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	27.1	14.98
HORVU1Hr1G092440.13	Barley	cytosol, golgi, mitochondrion, plastid	26.88	14.42
HORVU2Hr1G019730.5	Barley	cytosol, plastid	29.68	13.14
HORVU7Hr1G037870.1	Barley	plastid	29.25	13.09
HORVU6Hr1G075440.6	Barley	mitochondrion	26.88	12.68
HORVU4Hr1G046420.6	Barley	cytosol, plastid	30.97	12.47
HORVU4Hr1G033300.1	Barley	cytosol	29.68	10.66

Protein Annotations

EnsemblPlants:HORVU3Hr1G061800.1	EnsemblPlantsGene:HORVU3Hr1G061800	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23074
PANTHER:PTHR23074:SF92	PFAM:PF00004	SEG:seg	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000B46A61B
UniProt:A0A287LA40	MapMan:50.3.6	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:470539593..470547737

Molecular Weight (calculated)

51520.4 Da

IEP (calculated)

5.820

GRAVY (calculated)

-0.342

Length

465 amino acids

Sequence
(BLAST)

001: LSSPSDSDGL VKKQERRFAC LPAPVLRALV CLFTTQHQRH RLRLASATSG AVASLRAAWG PAAYAMAAGD EPSVTRWSFQ DFERYYDAGL GICRQPKGDG
101: DGDSNDDAPP GSGAADAAHA NGGADLSVFE HYERMDRNVE LRNGAMDAGP PQKSLLPSFE SAETRNLAET LLRDIIRGSP DVKWESIKGL ETAKRLLKEA
201: VVMPIKYPKY FTGLLSPWKG ILLFGPPGTG KTMLAKAVAT ECKTTFFNIS ASSIVSKWRG DSEKLVKVLF ELARHHAPST IFLDEIDAII SQRGEARSEH
301: EASRRLKTEL LIQMDGLTKT DELVFVLAAT NLPWELDAAM LRRLEKRILV PLPEAEARHA MFEEFLPLTR DTMEIPYDAL VENTEGYSGS DIRLVCKEAA
401: MQPLRRLMAV LEGRQEEIPE DELPEVGPIA TEDIELALRN TRPSAHLHAH RYEKFNQDYG SHVLS

Best Arabidopsis Sequence Match ( AT2G34560.2 )
(BLAST)

001: MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.