Factsheet for HORVU3Hr1G010300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G002980.2
HORVU4Hr1G072020.1
HORVU5Hr1G002970.1
HORVU7Hr1G045860.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27600.1	HORVU4Hr1G072020.1	AT3G54840.1	17468262
AT2G27600.1	HORVU4Hr1G002980.2	AT4G19640.1	17468262
AT2G27600.1	HORVU5Hr1G002970.1	AT4G19640.1	17468262
AT2G27600.1	HORVU7Hr1G045860.5	AT4G26750.1	17468262

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0141100-02	Rice	cytosol, plasma membrane	54.2	93.73
TraesCS3D01G053600.1	Wheat	cytosol	70.23	84.02
TraesCS3A01G054100.1	Wheat	cytosol	70.04	83.79
TraesCS3B01G065200.1	Wheat	cytosol	69.85	83.56
Zm00001d039904_P006	Maize	cytosol	67.18	80.92
EES00346	Sorghum	cytosol	66.6	80.05
Zm00001d008596_P005	Maize	cytosol	66.79	76.92
GSMUA_Achr4P24320_001	Banana	cytosol	59.35	76.23
CDX93578	Canola	cytosol	61.64	75.12
Bra018640.1-P	Field mustard	cytosol	61.45	74.88
Bra000503.1-P	Field mustard	cytosol	61.64	74.6
Bra012009.1-P	Field mustard	cytosol	61.64	74.6
CDX83275	Canola	cytosol	61.64	74.6
CDY04504	Canola	cytosol	61.45	74.54
CDX95077	Canola	cytosol	61.26	74.48
KRH26619	Soybean	nucleus	61.83	74.31
Solyc11g007170.1.1	Tomato	cytosol	57.25	74.26
AT2G27600.1	Thale cress	cytosol	61.64	74.25
KRH25197	Soybean	cytosol	61.45	74.19
CDX71438	Canola	cytosol	60.69	74.13
GSMUA_Achr2P22550_001	Banana	cytosol	58.21	74.03
GSMUA_Achr3P01430_001	Banana	cytosol	58.02	73.97
CDY31186	Canola	cytosol	61.07	73.73
KRH30451	Soybean	cytosol	61.07	73.73
KRH22691	Soybean	cytosol	57.25	73.35
VIT_13s0106g00490.t01	Wine grape	cytosol	59.73	72.12
PGSC0003DMT400050194	Potato	cytosol	58.78	70.8
Os01t0141300-00	Rice	cytosol	51.34	56.28
HORVU3Hr1G072910.6	Barley	cytosol	26.72	37.23
HORVU3Hr1G061800.1	Barley	cytosol, plastid	28.63	32.26
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	13.17	28.63
HORVU3Hr1G063300.1	Barley	cytosol	28.05	28.21
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	9.35	27.53
HORVU4Hr1G059040.2	Barley	cytosol	13.17	27.38
HORVU7Hr1G013190.8	Barley	plastid	29.01	27.19
HORVU3Hr1G072480.2	Barley	cytosol	12.4	25.79
HORVU0Hr1G021880.1	Barley	endoplasmic reticulum	19.27	25.63
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	13.74	25.17
HORVU7Hr1G091480.2	Barley	plastid	19.27	23.38
HORVU7Hr1G026880.14	Barley	cytosol	19.85	22.37
HORVU5Hr1G029910.10	Barley	cytosol, mitochondrion, nucleus	28.24	20.76
HORVU3Hr1G055830.5	Barley	cytosol	22.9	14.85
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	23.09	14.39
HORVU1Hr1G092440.13	Barley	cytosol, golgi, mitochondrion, plastid	21.56	13.03
HORVU6Hr1G075440.6	Barley	mitochondrion	22.9	12.17
HORVU7Hr1G037870.1	Barley	plastid	23.28	11.74
HORVU2Hr1G019730.5	Barley	cytosol, plastid	23.28	11.62
HORVU4Hr1G046420.6	Barley	cytosol, plastid	23.28	10.56
HORVU4Hr1G033300.1	Barley	cytosol	23.86	9.65

Protein Annotations

Gene3D:1.10.8.60	MapMan:22.5.4.4.1	Gene3D:3.40.50.300	UniProt:A0A287K2S5	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU3Hr1G010300
EnsemblPlants:HORVU3Hr1G010300.1	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF137	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000B477B54	InterPro:Vps4_C	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:22601280..22607838

Molecular Weight (calculated)

57685.5 Da

IEP (calculated)

10.879

GRAVY (calculated)

-0.773

Length

524 amino acids

Sequence
(BLAST)

001: KKHTLPRLSS SPFPQRTAPR LRSSFSSSSS SSSSSHLLRQ TPGPSNRRRR PRRIRGPRPR PARPRPAPRA DPPESAAKAA PFRLSPDVQQ LQGAGDRVRE
101: AGRPGGQCRQ LRQGVPALHE RARVLQDPPQ VREEPQDQGG HHRQVHRVPP PRRGDPGRPR RGRRRPPGAP NGGDAAVATR PKTKGKDAGG DGAGGDDSEQ
201: SKLRAGLNSA IITEKPNIKW NDVAGLESAK QALQEAVILP VKFPQFFTGK RRPWRAFLLY GPPGTGKSYL AKAVATEADS TFFSISSSDL VSKWMGESEK
301: LVANLFQMAR ENAPSIIFID EIDSLCGTRG EGNESEASRR IKTELLVQMQ GVGHNDDKVL VLAATNTPYA LDQAVRRRFD KRIYIPLPDA KARQHMFKVH
401: LGDTPHSLSE SDFEVLGRRT EGFSGSDVAV CVKDVLFEPV RKTQDAMYFF KTDGDMWMPC GSKQPGAVQT TMQDLASKGL ASQILPPPIS KSDFEKVLAR
501: QRPTVGKKDL EVHEKFTKEF GEEG

Best Arabidopsis Sequence Match ( AT2G27600.1 )
(BLAST)

001: MYSNFKEQAI EYVKQAVHED NAGNYNKAFP LYMNALEYFK THLKYEKNPK IREAITQKFT EYLRRAEEIR AVLDEGGSGP GSNGDAAVAT RPKTKPKDGE
101: GGGKDGEDPE QSKLRAGLNS AIVREKPNIK WSDVAGLESA KQALQEAVIL PVKFPQFFTG KRRPWRAFLL YGPPGTGKSY LAKAVATEAD STFFSVSSSD
201: LVSKWMGESE KLVSNLFEMA RESAPSIIFV DEIDSLCGTR GEGNESEASR RIKTELLVQM QGVGHNDEKV LVLAATNTPY ALDQAIRRRF DKRIYIPLPE
301: AKARQHMFKV HLGDTPHNLT EPDFEYLGQK TEGFSGSDVS VCVKDVLFEP VRKTQDAMFF FKSPDGTWMP CGPRHPGAIQ TTMQDLATKG LAEKIIPPPI
401: TRTDFEKVLA RQRPTVSKSD LDVHERFTQE FGEEG

Arabidopsis Description

SKD1Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.