Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93578 | Canola | cytosol | 99.3 | 99.53 |
| Bra018640.1-P | Field mustard | cytosol | 99.07 | 99.3 |
| CDY04504 | Canola | cytosol | 93.27 | 93.06 |
| CDX83275 | Canola | cytosol | 93.27 | 92.84 |
| CDX71438 | Canola | cytosol | 92.34 | 92.77 |
| CDY31186 | Canola | cytosol | 93.04 | 92.4 |
| Os01t0141100-02 | Rice | cytosol, plasma membrane | 64.27 | 91.42 |
| KRH30451 | Soybean | cytosol | 90.02 | 89.4 |
| KRH25197 | Soybean | cytosol | 90.02 | 89.4 |
| GSMUA_Achr4P24320_001 | Banana | cytosol | 84.45 | 89.22 |
| VIT_06s0080g00160.t01 | Wine grape | extracellular | 89.33 | 88.91 |
| KRH26619 | Soybean | nucleus | 89.79 | 88.76 |
| KRH22691 | Soybean | cytosol | 84.22 | 88.75 |
| EES00346 | Sorghum | cytosol | 89.56 | 88.53 |
| GSMUA_Achr2P22550_001 | Banana | cytosol | 84.45 | 88.35 |
| Zm00001d039904_P006 | Maize | cytosol | 89.1 | 88.28 |
| GSMUA_Achr3P01430_001 | Banana | cytosol | 83.06 | 87.1 |
| TraesCS3A01G054100.1 | Wheat | cytosol | 88.17 | 86.76 |
| TraesCS3B01G065200.1 | Wheat | cytosol | 87.94 | 86.53 |
| TraesCS3D01G053600.1 | Wheat | cytosol | 87.7 | 86.3 |
| PGSC0003DMT400050194 | Potato | cytosol | 85.85 | 85.06 |
| Solyc11g007170.1.1 | Tomato | cytosol | 79.58 | 84.9 |
| Zm00001d008596_P005 | Maize | cytosol | 89.33 | 84.62 |
| TraesCS6A01G133300.1 | Wheat | cytosol | 74.25 | 73.06 |
| TraesCS6B01G161700.1 | Wheat | cytosol | 74.01 | 73.0 |
| TraesCS6D01G122900.1 | Wheat | cytosol | 74.01 | 73.0 |
| Os02t0159900-01 | Rice | plasma membrane | 73.09 | 72.75 |
| Os01t0141300-00 | Rice | cytosol | 73.09 | 65.9 |
| HORVU3Hr1G010300.1 | Barley | cytosol, plastid | 74.48 | 61.26 |
| CDY18925 | Canola | plastid | 33.18 | 39.5 |
| CDX84641 | Canola | cytosol | 32.95 | 37.87 |
| CDX79566 | Canola | cytosol | 32.95 | 37.77 |
| CDY17260 | Canola | cytosol | 33.41 | 37.6 |
| CDX84306 | Canola | cytosol | 33.18 | 37.05 |
| CDX74745 | Canola | cytosol | 36.19 | 32.84 |
| CDY37590 | Canola | cytosol | 37.12 | 31.31 |
| CDY38662 | Canola | cytosol | 36.89 | 30.81 |
| CDX79393 | Canola | cytosol | 37.59 | 30.62 |
| CDY57698 | Canola | cytosol | 37.35 | 30.32 |
| CDY37046 | Canola | cytosol | 35.5 | 29.94 |
| CDY38752 | Canola | endoplasmic reticulum | 26.22 | 29.27 |
| CDY19035 | Canola | endoplasmic reticulum | 25.99 | 28.57 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 25.75 | 28.32 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 25.52 | 28.28 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 25.52 | 28.13 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 25.52 | 28.13 |
| CDY30236 | Canola | endoplasmic reticulum | 25.52 | 28.06 |
| CDY55344 | Canola | endoplasmic reticulum | 25.52 | 28.06 |
| CDY14372 | Canola | endoplasmic reticulum | 25.75 | 27.96 |
| CDY20251 | Canola | endoplasmic reticulum | 25.75 | 27.61 |
| CDY24618 | Canola | endoplasmic reticulum | 17.4 | 26.69 |
| CDX92656 | Canola | cytosol | 21.81 | 21.81 |
| CDY34176 | Canola | plastid | 32.48 | 21.6 |
| CDY28494 | Canola | plastid | 32.48 | 21.6 |
| CDY27380 | Canola | nucleus | 35.73 | 20.75 |
| CDX96166 | Canola | cytosol | 26.68 | 16.94 |
| CDY08360 | Canola | endoplasmic reticulum | 30.16 | 15.64 |
| CDY19639 | Canola | extracellular, vacuole | 29.0 | 15.57 |
| CDY38192 | Canola | plasma membrane | 29.93 | 15.52 |
| CDY49165 | Canola | extracellular, plasma membrane | 28.07 | 15.49 |
| CDY56163 | Canola | extracellular, vacuole | 28.77 | 15.4 |
| CDY51824 | Canola | extracellular, plasma membrane | 28.77 | 15.38 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 30.86 | 13.31 |
| CDY45052 | Canola | mitochondrion | 30.63 | 13.21 |
| CDY33415 | Canola | cytosol, mitochondrion | 31.09 | 13.19 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 31.09 | 12.87 |
| CDX91317 | Canola | plastid | 29.0 | 11.81 |
| CDX89214 | Canola | extracellular, plasma membrane | 20.65 | 11.74 |
| CDY32485 | Canola | plastid | 29.47 | 11.52 |
| CDX90936 | Canola | plastid | 28.77 | 11.33 |
| CDX97266 | Canola | plastid | 28.77 | 10.96 |
| CDX89933 | Canola | plastid | 29.23 | 10.9 |
| CDY18129 | Canola | cytosol, plastid | 29.7 | 10.54 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 17.4 | 10.45 |
| CDY18018 | Canola | plastid | 29.47 | 10.41 |
| CDY50381 | Canola | plastid | 28.54 | 10.24 |
| CDY22053 | Canola | plastid | 28.54 | 10.01 |
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.24 | 9.99 |
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.24 | 9.94 |
| CDX89934 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:1.20.58.280 | MapMan:22.5.4.4.1 | Gene3D:3.40.50.300 | GO:A0A078E1Q7 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlants:CDX95077 | ProteinID:CDX95077 | ProteinID:CDX95077.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00100600001 | InterPro:MIT | InterPro:MIT_dom_sf |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF04212 | PFAM:PF09336 | ScanProsite:PS00674 | PANTHER:PTHR23074 |
| PANTHER:PTHR23074:SF137 | SMART:SM00382 | SMART:SM00745 | SUPFAM:SSF116846 | SUPFAM:SSF52540 | UniParc:UPI0004EF1D90 |
| InterPro:Vps4_C | : | : | : | : | : |
Description
BnaC05g05940D
Coordinates
chrLK031886:+:994880..997444
Molecular Weight (calculated)
48189.1 Da
IEP (calculated)
6.808
GRAVY (calculated)
-0.545
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSNFKEQAI EYVKQAVQED NAGNYNKAFP LYMNALEYFK THLKYEKNPK IREAITQKFT EYLRRAEEIR AVLDEGGSGP GSNGDAAVAT KAKSKGKDNG
101: DGEDKEQSKL RAGLDSAIVR EKPNVKWSDV AGLESAKQAL QEAVILPVKF PQFFTGNRRP WRAFLLYGPP GTGKSYLAKA VATEADSTFF SVSSSDLVSK
201: WMGESEKLVS NLFEMARESA PSIIFVDEID SLCGQRGEGN ESEASRRIKT ELLVQMQGVG HNDEKVLVLA ATNTPYALDQ AIRRRFDKRI YIPLPDVKAR
301: QHMFKVHLGD TPHNLNEADF EYLARKTEGF SGSDVAVCVK DVLFEPVRKT QDAMFFFKSA DGTWMPCGPK QSGAIQITMQ DLAEKGLAEK IIPPPISRTD
401: FEKVLARQRP TVSKSDLEVH ERFTKEFGEE G
101: DGEDKEQSKL RAGLDSAIVR EKPNVKWSDV AGLESAKQAL QEAVILPVKF PQFFTGNRRP WRAFLLYGPP GTGKSYLAKA VATEADSTFF SVSSSDLVSK
201: WMGESEKLVS NLFEMARESA PSIIFVDEID SLCGQRGEGN ESEASRRIKT ELLVQMQGVG HNDEKVLVLA ATNTPYALDQ AIRRRFDKRI YIPLPDVKAR
301: QHMFKVHLGD TPHNLNEADF EYLARKTEGF SGSDVAVCVK DVLFEPVRKT QDAMFFFKSA DGTWMPCGPK QSGAIQITMQ DLAEKGLAEK IIPPPISRTD
401: FEKVLARQRP TVSKSDLEVH ERFTKEFGEE G
001: MYSNFKEQAI EYVKQAVHED NAGNYNKAFP LYMNALEYFK THLKYEKNPK IREAITQKFT EYLRRAEEIR AVLDEGGSGP GSNGDAAVAT RPKTKPKDGE
101: GGGKDGEDPE QSKLRAGLNS AIVREKPNIK WSDVAGLESA KQALQEAVIL PVKFPQFFTG KRRPWRAFLL YGPPGTGKSY LAKAVATEAD STFFSVSSSD
201: LVSKWMGESE KLVSNLFEMA RESAPSIIFV DEIDSLCGTR GEGNESEASR RIKTELLVQM QGVGHNDEKV LVLAATNTPY ALDQAIRRRF DKRIYIPLPE
301: AKARQHMFKV HLGDTPHNLT EPDFEYLGQK TEGFSGSDVS VCVKDVLFEP VRKTQDAMFF FKSPDGTWMP CGPRHPGAIQ TTMQDLATKG LAEKIIPPPI
401: TRTDFEKVLA RQRPTVSKSD LDVHERFTQE FGEEG
101: GGGKDGEDPE QSKLRAGLNS AIVREKPNIK WSDVAGLESA KQALQEAVIL PVKFPQFFTG KRRPWRAFLL YGPPGTGKSY LAKAVATEAD STFFSVSSSD
201: LVSKWMGESE KLVSNLFEMA RESAPSIIFV DEIDSLCGTR GEGNESEASR RIKTELLVQM QGVGHNDEKV LVLAATNTPY ALDQAIRRRF DKRIYIPLPE
301: AKARQHMFKV HLGDTPHNLT EPDFEYLGQK TEGFSGSDVS VCVKDVLFEP VRKTQDAMFF FKSPDGTWMP CGPRHPGAIQ TTMQDLATKG LAEKIIPPPI
401: TRTDFEKVLA RQRPTVSKSD LDVHERFTQE FGEEG
Arabidopsis Description
SKD1Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.