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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX91317 Canola plastid 87.0 93.01
Bra018548.1-P Field mustard plastid 95.05 88.19
Os11t0661400-01 Rice cytosol 18.13 85.06
CDX90936 Canola plastid 80.11 82.82
CDY22053 Canola plastid 87.0 80.07
CDY18018 Canola plastid 85.06 78.85
Zm00001d029385_P001 Maize cytosol 13.17 78.01
CDY50381 Canola plastid 82.41 77.6
AT4G02480.1 Thale cress plastid 84.62 75.65
CDY32485 Canola plastid 73.03 74.95
CDX89933 Canola plastid 74.8 73.18
CDY18129 Canola cytosol, plastid 75.51 70.35
Zm00001d049686_P001 Maize plastid 14.85 70.29
TraesCS1B01G120800.1 Wheat cytosol 14.59 65.22
GSMUA_Achr11P... Banana cytosol 40.32 64.68
HORVU7Hr1G026880.14 Barley cytosol 24.76 60.22
KRH71559 Soybean cytosol 58.8 60.13
Solyc09g074950.2.1 Tomato plastid 64.46 58.93
KRH71560 Soybean nucleus 64.72 58.89
Os03t0344700-01 Rice cytosol 40.05 58.45
KRH31895 Soybean nucleus 63.93 57.98
Solyc06g084530.2.1 Tomato extracellular, nucleus 64.1 57.95
VIT_07s0005g00200.t01 Wine grape plastid 65.52 57.58
KRH31896 Soybean nucleus 62.33 57.5
GSMUA_Achr11P... Banana cytosol 45.45 57.17
GSMUA_Achr8P33760_001 Banana cytosol 55.7 57.07
GSMUA_Achr8P10090_001 Banana cytosol 53.67 55.84
GSMUA_Achr3P00740_001 Banana mitochondrion 56.41 55.62
CDX92656 Canola cytosol 20.07 52.67
KXG29076 Sorghum plastid 57.03 52.23
TraesCS7B01G028300.1 Wheat cytosol 36.43 52.22
EES16128 Sorghum cytosol, plastid 42.71 51.82
HORVU2Hr1G019730.5 Barley cytosol, plastid 48.1 51.81
Zm00001d007139_P007 Maize cytosol, plastid 48.01 51.37
TraesCS4D01G145100.12 Wheat plastid 55.53 51.14
TraesCS2A01G113900.1 Wheat cytosol 49.78 51.14
TraesCS2B01G132900.3 Wheat cytosol, plastid 49.51 50.91
Zm00001d007698_P002 Maize plastid 56.94 50.87
Os07t0672500-02 Rice cytosol, plastid 48.54 50.79
TraesCS4A01G169300.15 Wheat plastid 55.35 50.77
OQU90457 Sorghum cytosol, plastid 48.81 50.46
Zm00001d048689_P004 Maize plastid 55.79 50.32
TraesCS4B01G126300.7 Wheat nucleus 55.7 50.08
TraesCS2D01G114500.1 Wheat cytosol, plastid 49.87 49.74
HORVU4Hr1G033300.1 Barley cytosol 55.88 48.8
EER92288 Sorghum cytosol 47.3 48.2
TraesCS4B01G155600.1 Wheat cytosol 46.6 47.91
TraesCS4A01G142800.3 Wheat cytosol 46.42 47.77
TraesCS4D01G168600.1 Wheat cytosol 46.68 47.7
Zm00001d029120_P004 Maize cytosol 47.3 47.51
TraesCS7D01G127200.1 Wheat cytosol 41.2 47.17
Zm00001d047494_P007 Maize cytosol 45.8 46.84
TraesCS7A01G128400.2 Wheat cytosol, plastid 41.82 46.65
HORVU4Hr1G046420.6 Barley cytosol, plastid 46.86 45.89
CDY24618 Canola endoplasmic reticulum 11.23 45.2
OQU79278 Sorghum cytosol, plastid 35.9 44.03
CDY71574 Canola endoplasmic reticulum, plasma membrane 14.77 42.6
CDX92836 Canola endoplasmic reticulum, plasma membrane 14.68 42.46
CDY29857 Canola endoplasmic reticulum, plasma membrane 14.68 42.46
CDY19035 Canola endoplasmic reticulum 14.59 42.09
CDY30236 Canola endoplasmic reticulum 14.59 42.09
CDY55344 Canola endoplasmic reticulum 14.59 42.09
CDY14372 Canola endoplasmic reticulum 14.59 41.56
CDY20251 Canola endoplasmic reticulum 14.5 40.8
CDY38752 Canola endoplasmic reticulum 13.88 40.67
CDY56163 Canola extracellular, vacuole 28.56 40.12
CDY49165 Canola extracellular, plasma membrane 27.67 40.08
CDY51824 Canola extracellular, plasma membrane 28.47 39.95
CDY19639 Canola extracellular, vacuole 28.21 39.73
CDY47077 Canola endoplasmic reticulum, plasma membrane 13.44 39.07
CDY08360 Canola endoplasmic reticulum 28.21 38.39
CDY38192 Canola plasma membrane 28.21 38.39
CDX96166 Canola cytosol 22.99 38.29
CDX89214 Canola extracellular, plasma membrane 23.78 35.49
CDX84641 Canola cytosol 11.49 34.67
CDX92857 Canola endoplasmic reticulum, extracellular, plasma membrane 21.57 34.66
CDY18925 Canola plastid 11.05 34.53
CDY29873 Canola endoplasmic reticulum, extracellular, plasma membrane 21.4 34.52
CDX79566 Canola cytosol 11.41 34.31
CDY17260 Canola cytosol 11.58 34.2
CDX84306 Canola cytosol 11.58 33.94
CDY19014 Canola endoplasmic reticulum, extracellular 21.4 33.7
CDY45052 Canola mitochondrion 27.94 31.63
CDY03591 Canola cytosol, mitochondrion, plastid 27.67 31.33
CDY33415 Canola cytosol, mitochondrion 28.03 31.2
CDY42204 Canola cytosol, mitochondrion, plastid 28.03 30.45
CDX74745 Canola cytosol 12.64 30.11
CDX95077 Canola cytosol 10.96 28.77
CDX93578 Canola cytosol 10.88 28.6
CDY37590 Canola cytosol 12.82 28.38
CDY38662 Canola cytosol 12.91 28.29
CDX79393 Canola cytosol 13.17 28.17
CDY31186 Canola cytosol 10.79 28.11
CDY57698 Canola cytosol 13.17 28.06
CDX71438 Canola cytosol 10.61 27.97
CDY04504 Canola cytosol 10.61 27.78
CDX83275 Canola cytosol 10.61 27.71
CDY37046 Canola cytosol 12.38 27.4
CDY28494 Canola plastid 14.85 25.93
CDY34176 Canola plastid 14.77 25.77
CDY27380 Canola nucleus 12.64 19.27
CDX89934 Canola cytosol 0.35 1.53
Protein Annotations
Gene3D:1.10.8.60Gene3D:3.40.50.300MapMan:35.1GO:A0A078E7T0InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_coreEnsemblPlants:CDX97266ProteinID:CDX97266ProteinID:CDX97266.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00104296001InterPro:P-loop_NTPase
PFAM:PF00004ScanProsite:PS00674PANTHER:PTHR23074PANTHER:PTHR23074:SF70SMART:SM00382InterPro:SMAD_FHA_dom_sf
SUPFAM:SSF49879SUPFAM:SSF52540UniParc:UPI0004EEE909SEG:seg::
Description
BnaA02g20570D
Coordinates
chrLK031898:-:414085..420401
Molecular Weight (calculated)
123381.0 Da
IEP (calculated)
7.533
GRAVY (calculated)
-0.323
Length
1131 amino acids
Sequence
(BLAST)
0001: MVETRRSSSA PKRFCSSSSP PEPSSSSPRP SKRSKVKIDA ALEPVRSSCP NQGPVSDPGE PELGSSDPHA EKTVATDVRV MENSPEVLAT PTLAGEVVAE
0101: GERSKAGKKR ANAPWAKLLS QYPQNPHRIM RGPVFTVGRL GCNLSIKDHS MPSTLCELKQ AKHGAPSVAS LEITGNGFLV QVNGKCYQKS SCVHLRGGDE
0201: VIFSVSGRHA YIFQPLKDEN LAAPDKASSV NLCEARGAPH LETRAGDSSA GDGASILASL SKGISKLLDE RREVRESLRD SDLSSTISTR RQAFKDSLRG
0301: GVLKAQDIEV SLEKFPYFLS ATTKDVLIAS MYVHMKDLPT TCPRILLSGP AGSDIYQEML AKALAKNLGA KVMIVDSLLL PGHFNVVLFI KTIYFYLEQV
0401: GIKLNAIAVT REAESSKESP RRERLSTLAK RAVQDAQALQ HKKSTSSVDA DITGGSTLSS QALPKQEVST ATSKSYTFKA GDRVKFLGPP SSAVSSLQGS
0501: PLRGPTIGFH GKVVLAFEDN CSSKIGIRFD RPVPDGNDLG GLCEEDHGFF CAASSLRLDG SSGDDADRLA VNEIFEVALS EGEGGSLILF LKDIEKSLVG
0601: NSDVYATLKS KLENLPENIV VMASQTQLDS RKEKSHPGGF LFTKFGGNQT ALLDLAFPDV GKLHEKSKEA SKPVKQITRL FPNKVAIQLP QDEALLLDWK
0701: EKLDRDTELL KVQANITSIL GILTKNRLDC PDLETLCIKD QSLLPESAEK VVGWAFSHHL MNCSEPTIKD NKLVISAESI TYGLQMLHGV QNENESLKKS
0801: LKDVVTENEF EKKLLSDVIP PSDIGVSFDD IGALENVKDT LKELVMLPLQ RPELFGKGQL TKPTKGILLF GPPGTGKTML AKAVATEAGA NFINISMSSI
0901: TSKWFGEGEK YVKAVFSLAS KIAPSVIFVD EVDSMLGRRE NPGEHEAMRK MKNEFMVNWD GLRTKDRERV LVLAATNRPF DLDEAVIRRL PRRLMVNLPD
1001: ATNRSKILSI ILSKEEMAPH VDLEAIANMT DGYSGSDLKN LCITAAHLPI REILEKEKKE KTVAEAENRP KPPLYSCTDI RPLTMNDFKA AHEQVCASVS
1101: TDSSNMNELQ QWNELYGEGG SRKKTSLSYF M
Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)
0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.