Factsheet for TraesCS1B01G120800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G287800.1	Wheat	golgi	39.13	26.54
TraesCS3B01G329000.2	Wheat	cytosol	34.39	22.48
TraesCS3B01G305600.2	Wheat	cytosol	33.99	21.77
TraesCS7B01G028300.1	Wheat	cytosol	66.01	21.17
TraesCS6B01G161700.1	Wheat	cytosol	30.83	17.85
TraesCS3B01G065200.1	Wheat	cytosol	30.04	17.35
EES16128	Sorghum	cytosol, plastid	63.64	17.27
TraesCS3B01G254800.2	Wheat	cytosol	53.36	16.77
GSMUA_Achr8P33760_001	Banana	cytosol	68.77	15.76
CDX91317	Canola	plastid	65.22	15.6
TraesCS1B01G455200.1	Wheat	mitochondrion	52.57	15.57
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	50.59	15.24
CDX90936	Canola	plastid	65.22	15.08
GSMUA_Achr3P00740_001	Banana	mitochondrion	67.98	15.0
TraesCS3B01G299100.1	Wheat	cytosol	30.83	14.97
KRH71559	Soybean	cytosol	64.82	14.83
TraesCS2B01G132900.3	Wheat	cytosol, plastid	64.43	14.82
CDY32485	Canola	plastid	64.03	14.7
CDX97266	Canola	plastid	65.22	14.59
TraesCS4B01G155600.1	Wheat	cytosol	62.45	14.36
CDX89933	Canola	plastid	65.61	14.36
TraesCS4B01G126300.7	Wheat	nucleus	70.75	14.23
Solyc09g074950.2.1	Tomato	plastid	67.19	13.74
CDY50381	Canola	plastid	64.82	13.66
Bra018548.1-P	Field mustard	plastid	65.61	13.62
CDY18129	Canola	cytosol, plastid	65.22	13.59
KRH31895	Soybean	nucleus	66.8	13.55
KRH31896	Soybean	nucleus	65.61	13.54
CDY18018	Canola	plastid	65.22	13.52
KRH71560	Soybean	nucleus	66.01	13.44
CDY22053	Canola	plastid	65.22	13.43
Solyc06g084530.2.1	Tomato	extracellular, nucleus	66.01	13.35
OQU79278	Sorghum	cytosol, plastid	48.62	13.34
Bra000878.1-P	Field mustard	plastid	65.22	13.18
VIT_07s0005g00200.t01	Wine grape	plastid	66.8	13.13
AT4G02480.1	Thale cress	plastid	65.61	13.12
AT1G02890.1	Thale cress	plastid	64.43	13.08
Bra036265.1-P	Field mustard	plastid	64.82	12.71
TraesCS7B01G089500.1	Wheat	mitochondrion	48.22	12.54
TraesCS5B01G110300.1	Wheat	nucleus	33.2	12.21
Bra032579.1-P	Field mustard	plastid	55.34	12.21
TraesCS6B01G333700.1	Wheat	mitochondrion	45.85	11.85
Bra033356.1-P	Field mustard	cytosol, plastid	63.24	10.73
CDX89934	Canola	cytosol	1.19	1.15

Protein Annotations

EnsemblPlants:TraesCS1B01G120800.1	EnsemblPlantsGene:TraesCS1B01G120800	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23074
PANTHER:PTHR23074:SF70	PFAM:PF00004	ScanProsite:PS00674	SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.1

Description

No Description!

Coordinates

chr1B:+:142719240..142720503

Molecular Weight (calculated)

28427.3 Da

IEP (calculated)

7.509

GRAVY (calculated)

-0.368

Length

253 amino acids

Sequence
(BLAST)

001: MLAKAVATES GAKFINIEMS RIMSKWLGDG EKYVKAIFSL ASKASPCVIF IDEVESMLGT RESRVEHEIK RRMKNEFMVH WDGLRTKDKE RVLVLGATNR
101: PFDLDEAVIR RFSHRLMVNL PDASSRERIL EQILFKEELA PDVDLKLLAN TTDGFSGSGL KELCMTAALR RIPELLEREK EEACLAKDEG RPEPALLGND
201: AIPPLSMKHL TSARDQGGAS FSSESNTMSA LIQWNNLYGD GGSKRKKNLS YFM

Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)

0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.