Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28628250
|
msms PMID:
28628250
doi
LIMOS, CNRS, Université Blaise Pascal, Aubière, 63173, France., UMR GDEC, INRA, Université Clermont Auvergne, 5 chemin de Beaulieu, Clermont-Ferrand, 63039, France., UMR GQE, INRA, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Gif-sur-Yvette, 91190, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G145100.12 | Wheat | plastid | 96.5 | 98.86 |
| TraesCS4A01G169300.15 | Wheat | plastid | 96.26 | 98.22 |
| Os11t0661400-01 | Rice | cytosol | 18.12 | 94.61 |
| HORVU4Hr1G033300.1 | Barley | cytosol | 96.74 | 93.98 |
| KXG29076 | Sorghum | plastid | 84.02 | 85.59 |
| Zm00001d029385_P001 | Maize | cytosol | 12.96 | 85.34 |
| Zm00001d007698_P002 | Maize | plastid | 83.86 | 83.33 |
| Zm00001d048689_P004 | Maize | plastid | 82.19 | 82.46 |
| Zm00001d049686_P001 | Maize | plastid | 13.99 | 73.64 |
| TraesCS1B01G120800.1 | Wheat | cytosol | 14.23 | 70.75 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 59.94 | 68.3 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 59.06 | 64.78 |
| TraesCS7B01G028300.1 | Wheat | cytosol | 37.68 | 60.08 |
| KRH71559 | Soybean | cytosol | 50.79 | 57.78 |
| Solyc09g074950.2.1 | Tomato | plastid | 56.36 | 57.32 |
| CDX91317 | Canola | plastid | 48.01 | 57.09 |
| Solyc06g084530.2.1 | Tomato | extracellular, nucleus | 56.68 | 56.99 |
| CDY32485 | Canola | plastid | 49.92 | 56.99 |
| CDX90936 | Canola | plastid | 49.36 | 56.76 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 58.03 | 56.72 |
| CDX89933 | Canola | plastid | 51.59 | 56.14 |
| KRH71560 | Soybean | nucleus | 55.33 | 55.99 |
| KRH31895 | Soybean | nucleus | 55.25 | 55.73 |
| CDX97266 | Canola | plastid | 50.08 | 55.7 |
| CDY18129 | Canola | cytosol, plastid | 53.18 | 55.11 |
| KRH31896 | Soybean | nucleus | 52.94 | 54.32 |
| Bra018548.1-P | Field mustard | plastid | 52.07 | 53.73 |
| CDY18018 | Canola | plastid | 51.91 | 53.52 |
| TraesCS2B01G132900.3 | Wheat | cytosol, plastid | 46.74 | 53.45 |
| Bra000878.1-P | Field mustard | plastid | 53.18 | 53.43 |
| AT1G02890.1 | Thale cress | plastid | 52.86 | 53.37 |
| CDY22053 | Canola | plastid | 51.59 | 52.81 |
| AT4G02480.1 | Thale cress | plastid | 53.1 | 52.81 |
| CDY50381 | Canola | plastid | 50.4 | 52.79 |
| TraesCS4B01G155600.1 | Wheat | cytosol | 45.87 | 52.45 |
| Bra032579.1-P | Field mustard | plastid | 47.62 | 52.22 |
| Bra036265.1-P | Field mustard | plastid | 52.38 | 51.09 |
| Bra033356.1-P | Field mustard | cytosol, plastid | 53.26 | 44.94 |
| TraesCS7B01G287800.1 | Wheat | golgi | 12.48 | 42.09 |
| TraesCS3B01G178200.1 | Wheat | cytosol, vacuole | 25.44 | 38.1 |
| TraesCS1B01G455200.1 | Wheat | mitochondrion | 25.6 | 37.7 |
| TraesCS3B01G254800.2 | Wheat | cytosol | 24.09 | 37.64 |
| TraesCS3B01G305600.2 | Wheat | cytosol | 10.65 | 33.92 |
| TraesCS3B01G329000.2 | Wheat | cytosol | 10.41 | 33.85 |
| TraesCS7B01G089500.1 | Wheat | mitochondrion | 24.8 | 32.07 |
| TraesCS6B01G333700.1 | Wheat | mitochondrion | 24.72 | 31.77 |
| TraesCS6B01G161700.1 | Wheat | cytosol | 9.94 | 28.6 |
| TraesCS3B01G065200.1 | Wheat | cytosol | 9.86 | 28.31 |
| TraesCS3B01G299100.1 | Wheat | cytosol | 11.29 | 27.26 |
| TraesCS5B01G110300.1 | Wheat | nucleus | 13.59 | 24.85 |
| CDX89934 | Canola | cytosol | 0.32 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | ncoils:Coil | InterPro:FHA_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | InterPro:IPR000253 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00498 |
| ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF70 | SMART:SM00382 | InterPro:SMAD_FHA_dom_sf | SUPFAM:SSF49879 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4B01G126300 | EnsemblPlants:TraesCS4B01G126300.7 | TIGR:cd00009 | TIGR:cd00060 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:159624339..159634465
Molecular Weight (calculated)
137210.0 Da
IEP (calculated)
6.777
GRAVY (calculated)
-0.456
Length
1258 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVETRRSSAA KRPSSTSPPP GSPSASAPPP KRPKVRPLSP RGSDKNLAPD STDLNPVPRQ AESPASPTSS APGRAEEDSE AAAATRSAGL ADDALTPAIK
0101: DQGGDKRAAG AAESSRRRKE TPPQQHAAPW AKLLSQCSQS PHLPISVPQF SVGQSKRCNL LLKDQSVSKI LCKLRHVEQG GPCELEVIGD KGVVLLNGRA
0201: VNPGMKVPLT GGDEVVFSSC GKHAYIFQHP LNDKVAKAVT SSAVGLLESP VAGVKHIHME NRTEVTSTVV GTEMLASVSS QSKDLPAVPP ASAEEENQRV
0301: VQPIISSASD KSKGHCISPD KECENGENTN EANSNIEDSP MDVVATPITP DAVGNDTSRQ NGFGSDAHLD EIGKIATYKI RPVLRMIAGS TVSEFDLTGD
0401: LFKALEDQRD LIRDLNTSAS LPPSRCQAFK DAMKQGVISP SDIEVTFENF PYYLSENTKN VLLSCSFLHL EKKEFIKQFS EISSINQRIL LSGPSGSEIY
0501: QETLIKALAK HFGARLLVVD SLLLPGVPSK DPETQKDVGK ADKSGDKAGG EKLTILHKHR SSLADTMHFR RPAAPTSSVN ADIVGTSTLH SATLPKQESS
0601: TATSKGYTFR EGERVRYVGP AQPPSGIHRG PSYGYRGRVM LAFEENGSSK IGVRFDKQIP DGNDLGGLCE EDHGFFCSAE LLRPDFSGSE EVERLAMTEL
0701: IEVISEESKI GSLIVLLKDV EKSFTGITES FSSLRNKLEL LPPGVLIIGS HTQMDSRKEK AHPGGFLFTK FASSSQTLFD LFPDSFGSRL HERNKESPKA
0801: MKHLNKLFPN KISIQLPQDE ALLTSWKQQL DRDVETLKAK SNIGSIRTFL NRSAIECSDL EELFIKDQSL TNENVDKIVG YAVSYHLKHN KVETSKDGEL
0901: IITSGSLKHG LDMLQSIHSD NKSSKKSLKD VATENEFEKR LLADVIPPND IGVTFDDIGA LENVKETLKE LVMLPLQRPE LFCKGQLTKP CKGILLFGPP
1001: GTGKTMLAKA VATEAGANFI NISMSSITSK WFGEGEKYVK AVFSLASKIS PSVIFIDEVD SMLGRRENPG EHEAMRKMKN EFMVNWDGLR TKDKERVLVL
1101: GATNRPFDLD EAVIRRFPRR LMVNLPDASN REKILKVILA KEELGQDTDL ESLANMTDGY SGSDLKNLCV TAAHYPIREI LEKEKKEKNV AKSEGRPEPA
1201: LHGSEDVRPL SLDDFKSAHE QVCASVSSDS ANMNELVQWN DLYGEGGSRK KKALSYFM
0101: DQGGDKRAAG AAESSRRRKE TPPQQHAAPW AKLLSQCSQS PHLPISVPQF SVGQSKRCNL LLKDQSVSKI LCKLRHVEQG GPCELEVIGD KGVVLLNGRA
0201: VNPGMKVPLT GGDEVVFSSC GKHAYIFQHP LNDKVAKAVT SSAVGLLESP VAGVKHIHME NRTEVTSTVV GTEMLASVSS QSKDLPAVPP ASAEEENQRV
0301: VQPIISSASD KSKGHCISPD KECENGENTN EANSNIEDSP MDVVATPITP DAVGNDTSRQ NGFGSDAHLD EIGKIATYKI RPVLRMIAGS TVSEFDLTGD
0401: LFKALEDQRD LIRDLNTSAS LPPSRCQAFK DAMKQGVISP SDIEVTFENF PYYLSENTKN VLLSCSFLHL EKKEFIKQFS EISSINQRIL LSGPSGSEIY
0501: QETLIKALAK HFGARLLVVD SLLLPGVPSK DPETQKDVGK ADKSGDKAGG EKLTILHKHR SSLADTMHFR RPAAPTSSVN ADIVGTSTLH SATLPKQESS
0601: TATSKGYTFR EGERVRYVGP AQPPSGIHRG PSYGYRGRVM LAFEENGSSK IGVRFDKQIP DGNDLGGLCE EDHGFFCSAE LLRPDFSGSE EVERLAMTEL
0701: IEVISEESKI GSLIVLLKDV EKSFTGITES FSSLRNKLEL LPPGVLIIGS HTQMDSRKEK AHPGGFLFTK FASSSQTLFD LFPDSFGSRL HERNKESPKA
0801: MKHLNKLFPN KISIQLPQDE ALLTSWKQQL DRDVETLKAK SNIGSIRTFL NRSAIECSDL EELFIKDQSL TNENVDKIVG YAVSYHLKHN KVETSKDGEL
0901: IITSGSLKHG LDMLQSIHSD NKSSKKSLKD VATENEFEKR LLADVIPPND IGVTFDDIGA LENVKETLKE LVMLPLQRPE LFCKGQLTKP CKGILLFGPP
1001: GTGKTMLAKA VATEAGANFI NISMSSITSK WFGEGEKYVK AVFSLASKIS PSVIFIDEVD SMLGRRENPG EHEAMRKMKN EFMVNWDGLR TKDKERVLVL
1101: GATNRPFDLD EAVIRRFPRR LMVNLPDASN REKILKVILA KEELGQDTDL ESLANMTDGY SGSDLKNLCV TAAHYPIREI LEKEKKEKNV AKSEGRPEPA
1201: LHGSEDVRPL SLDDFKSAHE QVCASVSSDS ANMNELVQWN DLYGEGGSRK KKALSYFM
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.