Factsheet for Zm00001d049686_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029385_P001	Maize	cytosol	59.83	74.87
Os11t0661400-01	Rice	cytosol	53.14	52.7
Zm00001d014775_P002	Maize	plastid	39.33	24.04
Zm00001d043410_P002	Maize	cytosol	35.98	20.72
Zm00001d036410_P002	Maize	plastid	39.75	19.96
Zm00001d039904_P006	Maize	cytosol	35.56	19.54
Zm00001d008596_P005	Maize	cytosol	35.56	18.68
Zm00001d045483_P002	Maize	cytosol	35.98	17.27
Zm00001d011563_P019	Maize	mitochondrion	36.4	16.57
Zm00001d011611_P005	Maize	cytosol	35.56	16.47
CDX91317	Canola	plastid	69.46	15.69
CDX90936	Canola	plastid	70.71	15.45
CDY32485	Canola	plastid	71.13	15.43
Zm00001d007139_P007	Maize	cytosol, plastid	67.78	15.33
GSMUA_Achr8P33760_001	Banana	cytosol	70.29	15.22
KRH71559	Soybean	cytosol	70.29	15.19
Zm00001d009702_P001	Maize	endoplasmic reticulum	53.14	15.07
CDX97266	Canola	plastid	70.29	14.85
CDX89933	Canola	plastid	71.55	14.79
KXG29076	Sorghum	plastid	75.73	14.66
GSMUA_Achr3P00740_001	Banana	mitochondrion	70.29	14.65
Bra032579.1-P	Field mustard	plastid	69.87	14.56
Zm00001d048689_P004	Maize	plastid	76.15	14.51
Zm00001d007698_P002	Maize	plastid	76.15	14.38
TraesCS4D01G145100.12	Wheat	plastid	73.64	14.33
CDY50381	Canola	plastid	71.97	14.32
TraesCS4A01G169300.15	Wheat	plastid	73.64	14.27
Zm00001d039315_P003	Maize	vacuole	49.79	14.15
CDY18129	Canola	cytosol, plastid	71.55	14.09
Zm00001d008983_P001	Maize	vacuole	49.79	14.07
CDY18018	Canola	plastid	71.55	14.02
CDY22053	Canola	plastid	71.97	14.0
TraesCS4B01G126300.7	Wheat	nucleus	73.64	13.99
Zm00001d029120_P004	Maize	cytosol	65.69	13.94
Zm00001d047494_P007	Maize	cytosol	64.44	13.92
Solyc09g074950.2.1	Tomato	plastid	71.97	13.9
KRH31896	Soybean	nucleus	71.13	13.87
Bra018548.1-P	Field mustard	plastid	70.71	13.86
AT1G02890.1	Thale cress	plastid	71.97	13.8
Solyc06g084530.2.1	Tomato	extracellular, nucleus	71.97	13.75
KRH71560	Soybean	nucleus	71.13	13.68
HORVU4Hr1G033300.1	Barley	cytosol	74.06	13.67
Bra000878.1-P	Field mustard	plastid	71.55	13.66
KRH31895	Soybean	nucleus	70.71	13.55
AT4G02480.1	Thale cress	plastid	71.13	13.44
VIT_07s0005g00200.t01	Wine grape	plastid	71.97	13.36
Bra036265.1-P	Field mustard	plastid	71.97	13.33
Zm00001d041083_P005	Maize	nucleus	36.4	12.83
Zm00001d052248_P009	Maize	mitochondrion	50.21	12.16
Bra033356.1-P	Field mustard	cytosol, plastid	71.55	11.47
Zm00001d043841_P003	Maize	cytosol	35.56	9.4
CDX89934	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d049686_P001	EnsemblPlants:Zm00001d049686_T001	EnsemblPlantsGene:Zm00001d049686	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23074	PANTHER:PTHR23074:SF70	PFAM:PF00004	ProteinID:AQK51069.1	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000844E273	UniProt:A0A1D6PX09	MapMan:35.1	:	:

Description

AAA-type ATPase family protein

Coordinates

chr4:-:40041861..40043916

Molecular Weight (calculated)

26039.5 Da

IEP (calculated)

9.684

GRAVY (calculated)

-0.364

Length

239 amino acids

Sequence
(BLAST)

001: MPSAPAAPPT PGRPRPLPRP APDAPSPRRP PPPRSSRPPP RPSPPSAPPA PVEIFLTYYG QDLITASSIH SLQPCKGILL FGPPGTGKTM LAKAVATEAG
101: ANFINISMSS ITSKWFGEGE KYVKVVFSLA SKIAPSVIFI DEVDSMLGRR ENPGEHEAMR KMKNEFMVNW DGLHTKDKEC VVVLGVTNRP FDLDEAVIRR
201: FPRREKILKV ILAKEELGSD VDMDSLANMT NGYSGSDLK

Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)

0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.