Factsheet for Bra036265.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22053	Canola	plastid	93.18	97.8
CDY50381	Canola	plastid	90.62	97.34
Bra000878.1-P	Field mustard	plastid	88.14	90.81
Bra018548.1-P	Field mustard	plastid	84.57	89.5
AT4G02480.1	Thale cress	plastid	85.12	86.8
Os11t0661400-01	Rice	cytosol	15.89	85.06
Zm00001d029385_P001	Maize	cytosol	11.78	79.58
Bra032579.1-P	Field mustard	plastid	64.73	72.8
Zm00001d049686_P001	Maize	plastid	13.33	71.97
KRH71559	Soybean	cytosol	55.97	65.28
TraesCS1B01G120800.1	Wheat	cytosol	12.71	64.82
GSMUA_Achr11P...	Banana	cytosol	35.27	64.54
Solyc09g074950.2.1	Tomato	plastid	60.93	63.54
KRH71560	Soybean	nucleus	61.01	63.31
Bra033356.1-P	Field mustard	cytosol, plastid	72.4	62.64
Solyc06g084530.2.1	Tomato	extracellular, nucleus	60.7	62.59
VIT_07s0005g00200.t01	Wine grape	plastid	62.4	62.55
KRH31896	Soybean	nucleus	59.38	62.48
KRH31895	Soybean	nucleus	60.39	62.47
GSMUA_Achr8P33760_001	Banana	cytosol	51.4	60.05
HORVU7Hr1G026880.14	Barley	cytosol	21.47	59.57
Os03t0344700-01	Rice	cytosol	35.66	59.35
GSMUA_Achr11P...	Banana	cytosol	40.85	58.62
GSMUA_Achr3P00740_001	Banana	mitochondrion	51.94	58.41
GSMUA_Achr8P10090_001	Banana	cytosol	47.91	56.85
KXG29076	Sorghum	plastid	52.4	54.74
EES16128	Sorghum	cytosol, plastid	39.07	54.08
Zm00001d007698_P002	Maize	plastid	52.48	53.48
TraesCS4A01G169300.15	Wheat	plastid	51.09	53.45
HORVU2Hr1G019730.5	Barley	cytosol, plastid	43.41	53.33
TraesCS4D01G145100.12	Wheat	plastid	50.54	53.09
Zm00001d048689_P004	Maize	plastid	51.32	52.79
TraesCS7B01G028300.1	Wheat	cytosol	32.09	52.47
Zm00001d007139_P007	Maize	cytosol, plastid	42.95	52.41
TraesCS4B01G126300.7	Wheat	nucleus	51.09	52.38
TraesCS2A01G113900.1	Wheat	cytosol	44.42	52.04
OQU90457	Sorghum	cytosol, plastid	43.95	51.83
TraesCS2B01G132900.3	Wheat	cytosol, plastid	44.19	51.82
Os07t0672500-02	Rice	cytosol, plastid	43.41	51.8
HORVU4Hr1G033300.1	Barley	cytosol	51.24	51.04
TraesCS2D01G114500.1	Wheat	cytosol, plastid	44.57	50.71
EER92288	Sorghum	cytosol	42.87	49.82
TraesCS4B01G155600.1	Wheat	cytosol	42.09	49.36
TraesCS4A01G142800.3	Wheat	cytosol	42.02	49.32
TraesCS4D01G168600.1	Wheat	cytosol	42.17	49.14
Zm00001d029120_P004	Maize	cytosol	42.79	49.02
Zm00001d047494_P007	Maize	cytosol	41.4	48.28
TraesCS7D01G127200.1	Wheat	cytosol	36.82	48.08
TraesCS7A01G128400.2	Wheat	cytosol, plastid	37.36	47.53
HORVU4Hr1G046420.6	Barley	cytosol, plastid	42.48	47.45
OQU79278	Sorghum	cytosol, plastid	32.71	45.77
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	13.1	43.11
Bra026316.1-P	Field mustard	endoplasmic reticulum	12.95	42.6
Bra003048.1-P	Field mustard	endoplasmic reticulum	12.87	41.81
Bra029104.1-P	Field mustard	extracellular, plasma membrane	25.66	40.22
Bra029063.1-P	Field mustard	endoplasmic reticulum	12.17	40.15
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	25.5	40.07
Bra003102.1-P	Field mustard	extracellular, plasma membrane	25.35	39.78
Bra027756.1-P	Field mustard	endoplasmic reticulum	25.5	39.59
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	25.35	39.45
Bra004917.1-P	Field mustard	cytosol	8.53	34.48
Bra005414.1-P	Field mustard	cytosol	10.47	34.44
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	24.65	32.06
Bra014239.1-P	Field mustard	mitochondrion	24.73	31.93
Bra039332.1-P	Field mustard	cytosol	9.92	29.29
Bra018640.1-P	Field mustard	cytosol	9.53	28.6
Bra012009.1-P	Field mustard	cytosol	9.3	27.71
Bra000503.1-P	Field mustard	cytosol	9.3	27.71
Bra003561.1-P	Field mustard	cytosol	11.24	27.31
Bra008479.1-P	Field mustard	cytosol	11.16	27.27
Bra032982.1-P	Field mustard	plastid	13.18	26.23
Bra022979.1-P	Field mustard	plastid	10.54	23.57

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra036265	EnsemblPlants:Bra036265.1	EnsemblPlants:Bra036265.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	UniProt:M4F5A9	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF70	SMART:SM00382	InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879
SUPFAM:SSF52540	UniParc:UPI0002541F89	SEG:seg	:	:	:

Description

AT4G02480 (E=0.0) | AAA-type ATPase family protein

Coordinates

chrA09:+:164756..171126

Molecular Weight (calculated)

139619.0 Da

IEP (calculated)

5.634

GRAVY (calculated)

-0.347

Length

1290 amino acids

Sequence
(BLAST)

0001: MVETRSSSSA SKRFCSSSSP EPSASSPRPS KRSKVKIDAA STAIESASAA AEPAGSSSAS EVPIENQGPG SDPGSESGEP ELRSSDPQQG VDAAEKPVVL
0101: TDVPLREASP ETDANPEVDV LATPAVAEEV VADGEKTKAG KKRAKAPWAK LLSQYPQNPH RIMRGPVFTV GRRGCDLSIK DQSMPSTLCE LKQAENGGPS
0201: VATLEITGNG VLVQVNGKCY QKGALVHLRG GDEVIFNISG RHAYIFQPLK DENQAAPDRA SSQILFEARG GRVHSETRAG ESSAVDGASI LASLSKYRNL
0301: HLRPPIAKSA KRQQNPEVPQ EPPSCNDCIS DTEMNDVDSN NDHAAIASVE KAVASTSYTA NENLNAGGSG LDPFQEADGG NPPASGFEIR PILRLLGESS
0401: SLDIRGISKL LDERREVREL LKEFDISSTI STRRQAFKDS LRGGILISQN IDVSLDNFPY FLSATTKDVL IASMYVHMEG GSKFAKYASD LPTTSPRILL
0501: SGPAGSEIYQ EMLAKALAKN FGAKLMIVDS LLLPGGSPAR EAESSKEGSR RERLSMLAKR AVQAAQALQH KKPTSSVDAD ITGGSMLSSQ ALPKQEVSTA
0601: TSKSYTFKAG MMFLSSDILL TLLYQSSHVT EQALLLYLGD RVKFLGPSSS AISSLQGPPL RGPTIGFQGK VVLAFEDNSS SKIGIRFDRP VPDGNDLGGL
0701: CEEDHGFFCA ASSLRLDGSS GDDADKLAVN EIFEVALSEA EGGSLILFLK DIEKSLVGNS DVYATLKSKL ENLPDNIVVM ASQTQLDTRK EKSHPGGFLF
0801: TKFGGNQTAL LDLAFPDNFS KLHDRSKETP KSMKQITRLF PNKVAIQLPQ DEALLSDWKE KLDRDTELLK VQANITSILG VLTKNRLDCP DLGTLCIKDQ
0901: TLLPESAEKV VGWAFSHHLM NCSEPTVKDN KLVISAESIT YGLQMLLGVQ NENKSLKKSL KDVVTENEFE KKLLSDVIPP SDIGVSFDDI GALENVKDTL
1001: KELVMLPLQR PELFDKGQLT KPTKGILLFG PPGTGKTMLA KAVATEAGAN FINISMSSIT SKWFGEGEKY VKAVFSLASK IAPSVIFVDE VDSMLGRREN
1101: PGEHEAMRKM KNEFMINWDG LRTKDRERVL VLAATNRPFD LDEAVIRRLP RRLMVNLPDA TNRAKILSVI LAKEEISPDV DLGAIANMTD GYSGSDLKNL
1201: CVTAAHLPIR EILEKEKKEK TAAEAENRPT PPLYSCTDIR PLTMTDFKAA HEQVCASVST DSSNMNELQQ WNELYGEGGS RKKTSLSYFM

Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)

0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.