Factsheet for Bra000878.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90936	Canola	plastid	86.98	99.54
CDY18018	Canola	plastid	90.58	92.95
Bra018548.1-P	Field mustard	plastid	86.02	88.35
Bra036265.1-P	Field mustard	plastid	90.81	88.14
AT4G02480.1	Thale cress	plastid	88.18	87.27
Os11t0661400-01	Rice	cytosol	16.37	85.06
Zm00001d029385_P001	Maize	cytosol	12.14	79.58
Bra032579.1-P	Field mustard	plastid	67.17	73.32
Zm00001d049686_P001	Maize	plastid	13.66	71.55
GSMUA_Achr11P...	Banana	cytosol	36.9	65.53
TraesCS1B01G120800.1	Wheat	cytosol	13.18	65.22
KRH71559	Soybean	cytosol	57.11	64.65
VIT_07s0005g00200.t01	Wine grape	plastid	65.66	63.87
Solyc09g074950.2.1	Tomato	plastid	62.78	63.54
Bra033356.1-P	Field mustard	cytosol, plastid	75.56	63.45
KRH71560	Soybean	nucleus	62.78	63.23
KRH31895	Soybean	nucleus	62.54	62.79
Solyc06g084530.2.1	Tomato	extracellular, nucleus	62.54	62.59
KRH31896	Soybean	nucleus	60.86	62.15
GSMUA_Achr8P33760_001	Banana	cytosol	53.83	61.05
HORVU7Hr1G026880.14	Barley	cytosol	22.28	60.0
Os03t0344700-01	Rice	cytosol	36.74	59.35
GSMUA_Achr3P00740_001	Banana	mitochondrion	53.43	58.33
GSMUA_Achr11P...	Banana	cytosol	41.37	57.62
GSMUA_Achr8P10090_001	Banana	cytosol	49.84	57.41
KXG29076	Sorghum	plastid	54.15	54.9
EES16128	Sorghum	cytosol, plastid	40.42	54.29
Zm00001d007698_P002	Maize	plastid	54.79	54.19
TraesCS4A01G169300.15	Wheat	plastid	53.12	53.93
TraesCS4D01G145100.12	Wheat	plastid	52.64	53.66
HORVU2Hr1G019730.5	Barley	cytosol, plastid	44.81	53.43
Zm00001d007139_P007	Maize	cytosol, plastid	44.97	53.26
TraesCS4B01G126300.7	Wheat	nucleus	53.43	53.18
TraesCS7B01G028300.1	Wheat	cytosol	33.39	52.98
Zm00001d048689_P004	Maize	plastid	52.8	52.71
Os07t0672500-02	Rice	cytosol, plastid	45.45	52.64
OQU90457	Sorghum	cytosol, plastid	45.85	52.47
TraesCS2A01G113900.1	Wheat	cytosol	46.01	52.32
TraesCS2B01G132900.3	Wheat	cytosol, plastid	45.77	52.09
HORVU4Hr1G033300.1	Barley	cytosol	53.27	51.51
TraesCS2D01G114500.1	Wheat	cytosol, plastid	46.17	50.97
EER92288	Sorghum	cytosol	44.25	49.91
TraesCS4A01G142800.3	Wheat	cytosol	43.29	49.32
TraesCS4B01G155600.1	Wheat	cytosol	43.29	49.27
TraesCS4D01G168600.1	Wheat	cytosol	43.37	49.05
Zm00001d029120_P004	Maize	cytosol	43.85	48.76
TraesCS7D01G127200.1	Wheat	cytosol	38.34	48.58
Zm00001d047494_P007	Maize	cytosol	42.81	48.46
TraesCS7A01G128400.2	Wheat	cytosol, plastid	38.58	47.63
HORVU4Hr1G046420.6	Barley	cytosol, plastid	43.61	47.27
OQU79278	Sorghum	cytosol, plastid	33.63	45.66
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	13.42	42.86
Bra026316.1-P	Field mustard	endoplasmic reticulum	13.26	42.35
Bra003048.1-P	Field mustard	endoplasmic reticulum	13.1	41.31
Bra029063.1-P	Field mustard	endoplasmic reticulum	12.46	39.9
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	26.12	39.83
Bra029104.1-P	Field mustard	extracellular, plasma membrane	26.04	39.61
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	25.88	39.08
Bra003102.1-P	Field mustard	extracellular, plasma membrane	25.64	39.05
Bra027756.1-P	Field mustard	endoplasmic reticulum	25.88	38.99
Bra005414.1-P	Field mustard	cytosol	10.7	34.18
Bra004917.1-P	Field mustard	cytosol	8.47	33.23
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	25.8	32.56
Bra014239.1-P	Field mustard	mitochondrion	25.48	31.93
Bra018640.1-P	Field mustard	cytosol	9.9	28.84
Bra008479.1-P	Field mustard	cytosol	12.14	28.79
Bra003561.1-P	Field mustard	cytosol	12.06	28.44
Bra039332.1-P	Field mustard	cytosol	9.9	28.38
Bra012009.1-P	Field mustard	cytosol	9.66	27.94
Bra000503.1-P	Field mustard	cytosol	9.66	27.94
Bra032982.1-P	Field mustard	plastid	13.42	25.93
Bra022979.1-P	Field mustard	plastid	10.78	23.4

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra000878	EnsemblPlants:Bra000878.1	EnsemblPlants:Bra000878.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	UniProt:M4C9J9	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF70	SMART:SM00382	InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879
SUPFAM:SSF52540	UniParc:UPI00025405FC	SEG:seg	:	:	:

Description

AT4G02480 (E=0.0) | AAA-type ATPase family protein

Coordinates

chrA03:+:13656462..13663499

Molecular Weight (calculated)

135334.0 Da

IEP (calculated)

5.281

GRAVY (calculated)

-0.383

Length

1252 amino acids

Sequence
(BLAST)

0001: MVETRRSSSA SKRFCSSSSS PEPSSSSPRP TKRSKVKIDA AIESAAAAEP AGSSSASEVP VENQGPVSDP GSESGEPELG SSDPQGVDAE KPVLTDVPVM
0101: EISPEADANP EADVLATPAI AGEVVADGEK SKAGKKRAKA PWAKLLSQYS QNPHRIMRGP VFTVGRRGCD LSIKDQSMPS TLCELKQSDH GGPSVATLEI
0201: TGNGVVVQVN GKCYQKSTCV HLRGGDEVIF TNFGRHAYIF QPLKDENLAA APDRASSVSV CEARGAPLKG VHVETRAGDS SAADGASILA SLSKYRNFHL
0301: LPPIAKSAKK QQNQEAPVVP SSCNDCVSDT EMNDADSNND HADIASVEKT ADANENLNAD GSGLDPFQEA ADGNAPGSGY EIRPILRLLG EPSSVDIRGI
0401: SKLLDERREV RELLKEYDLS STISTRRQAF NDSLREGVLS GQDIDVSLED FPYFLSATTK DVLIASMYVH MEGGSKFAKY ASDLSTTCPR ILLSGPAGSE
0501: IYQEMLAKAL AKRFGAKLMI VDSLLLPGGS PAKEAESSKD GSRRERLSML AKRAVQAAQA LQHKKPTSSV DADITGGSTL SSQALPKQEV STATSKSDRV
0601: KYVGPSSSAI SSLQGPPLRG PSIGFQGKVL LAFEDNCSSK VGIRFDRPVP DGNDLGGLCE EDHGFFCAAT SLRLDGSSSD DADKLAVNEV FEVALSESEG
0701: GSLILFLKDI EKSLVGNSDV YATLKSKFEN LPENIVVMAS QTQLDSRKEK SHPGGFLFTK FGGNQTALLD LAFPDNFSKL HDRSKETPKS MKQITRLFPN
0801: KVAIQLPQDE ALLSDWKEKL DRDTELLKVQ ANITSILSVL TKNRLDCPDL GTLSIKDQTL PSESVEKVVG WALSHHLMNC AEPTVKDNKL VISAEREASF
0901: ITYGLQMLHG VQDENKSLKK SLKDVVTENE FEKKLLSDVI PPSDIGVSFD DIGALENVKD TLKELVMLPL QRPELFDKGQ LTKPTKGILL FGPPGTGKTM
1001: LAKAVATEAG ANFINISMSS ITSKWFGEGE KYVKAVFSLA SKIAPSVIFV DEVDSMLGRR ENPGEHEAMR KMKNEFMVNW DGLRTKDRER VLVLAATNRP
1101: FDLDEAVIRR LPRRLMVNLP DATNRSKILS VILSKEEIAP DVDLEAIANM TDGYSGSDLK NLCVTAAHLP IREILEKEKK EKTAAEAENR PTPPLYSCTD
1201: IRSLTMADFK AAHEQVCASV STDSSNMNEL QQWNELYGEG GSRKKTSLSY FM

Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)

0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.