Factsheet for Bra003102.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49165	Canola	extracellular, plasma membrane	93.67	98.59
AT5G52882.1	Thale cress	extracellular, vacuole	91.12	90.35
Bra029104.1-P	Field mustard	extracellular, plasma membrane	90.27	90.16
KRH08796	Soybean	cytosol	17.76	83.91
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	81.75	81.06
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	80.78	80.88
KRH38312	Soybean	endoplasmic reticulum	71.41	71.85
KRH08780	Soybean	extracellular, plasma membrane	71.17	71.6
KRH08789	Soybean	cytosol	28.95	71.04
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	71.29	70.01
PGSC0003DMT400051401	Potato	endoplasmic reticulum	70.68	70.0
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	70.19	69.85
Bra027756.1-P	Field mustard	endoplasmic reticulum	67.64	66.91
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	51.95	65.49
Os01t0226400-01	Rice	plasma membrane	66.42	65.0
Zm00001d008983_P001	Maize	vacuole	66.3	64.42
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	65.45	64.35
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	65.82	64.33
Zm00001d039315_P003	Maize	vacuole	65.57	64.09
EES00021	Sorghum	endoplasmic reticulum	65.94	63.99
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	65.21	63.81
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	64.96	63.57
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	20.07	42.09
Bra026316.1-P	Field mustard	endoplasmic reticulum	19.59	41.07
Bra003048.1-P	Field mustard	endoplasmic reticulum	18.61	38.54
Bra029063.1-P	Field mustard	endoplasmic reticulum	18.13	38.11
Bra005414.1-P	Field mustard	cytosol	15.69	32.91
Bra004917.1-P	Field mustard	cytosol	12.41	31.97
Bra012009.1-P	Field mustard	cytosol	15.21	28.87
Bra000503.1-P	Field mustard	cytosol	15.09	28.64
Bra018640.1-P	Field mustard	cytosol	14.84	28.37
Bra039332.1-P	Field mustard	cytosol	14.48	27.23
Bra008479.1-P	Field mustard	cytosol	17.15	26.7
Bra003561.1-P	Field mustard	cytosol	17.15	26.55
Bra018548.1-P	Field mustard	plastid	39.17	26.42
Bra014239.1-P	Field mustard	mitochondrion	31.87	26.23
Bra032579.1-P	Field mustard	plastid	36.01	25.81
Bra000878.1-P	Field mustard	plastid	39.05	25.64
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	30.78	25.5
Bra036265.1-P	Field mustard	plastid	39.78	25.35
Bra032982.1-P	Field mustard	plastid	18.86	23.92
Bra022979.1-P	Field mustard	plastid	16.18	23.05
Bra033356.1-P	Field mustard	cytosol, plastid	37.96	20.93

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra003102	EnsemblPlants:Bra003102.1	EnsemblPlants:Bra003102.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	UniProt:M4CFX0	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002543913
SEG:seg	:	:	:	:	:

Description

AT5G52882 (E=2e-302) | ATP binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA10:-:5158610..5163130

Molecular Weight (calculated)

91981.1 Da

IEP (calculated)

5.904

GRAVY (calculated)

-0.434

Length

822 amino acids

Sequence
(BLAST)

001: MEQKSVLLSA LGVGVGLGIG LASGQSLGRW ANGSGSVEDG LTGEQMEQEL VRQIVDGRES TVTFDEFPYF LSERTRVLLT SAAYVHLKEL EISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALSHYCESK LLLLDITDFS IKIQSKYGCT KRKPLHKRSI SELTLDKMSS LMGSFSMLSQ FEVEPRGALR RDTSGNVLKS
201: SSLDSSSLPP RHKRNAISTS NSVTASSKRS TNLCFDEKLF LQSLYKVVVF VSKTNPLIIY LRDVEKLLES ERFYKLFQIL LNKISGPVLI LGSMVLEPED
301: DCQEVSEGVT ALFPYNIEIR PPEDESQLVS WKNRLEDDMK MIQFRDNKNH IAEVLAANDI QCDDLASICH ADTMCLSNHI EQIVVSAISY HLIHTKEPEY
401: RNGKLVISSK SLSHGLSIFQ EGGSRSSEDS LKLDTNTDSK RKGGEVCSKS ESKPESYSPE NKNELEKSLP SNKNDNPLPP KAPEVVPDNE FEKRIRPEVI
501: PADEIGVTFA DIGSLDETKD SLQELVMLPL RRPDLFKGGL LKPCRGILLF GPPGTGKTML AKAIANEAGA SFINVSMSTI TSKWFGEDEK NVRALFTLAA
601: KVSPTIIFVD EVDSMLGQRT RVGEHEAMRK IKNEFMTHWD GLMTKPGERI LVLAATNRPF DLDEAIIRRF ERRIMVGLPS TESREKILRT LLSKEKTDDL
701: DFNELGQMTE GYSGSDLKNL CITAAYRPVR ELIQQERLKD QEKKKREEAG KSAEESKEKE DEACEEKEII LRPLNMEDMR KAKTQVAASF ASEGSGMNEL
801: KQWNDLYGEG GSRKKEPLTY FL

Best Arabidopsis Sequence Match ( AT5G52882.1 )
(BLAST)

001: MEQKSVLLSA LGVGVGLGIG LASGQSLGRW ANGSGSVEDG LTGEQIEQEL IRQIVDGRES TVTFEEFPYF LSKRTRELLT SVAYVHLKEY DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KHN5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.