Factsheet for Bra026293.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89214	Canola	extracellular, plasma membrane	90.35	98.81
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	91.92	92.81
AT4G28000.2	Thale cress	extracellular	91.31	90.99
Bra029104.1-P	Field mustard	extracellular, plasma membrane	81.91	82.5
Bra003102.1-P	Field mustard	extracellular, plasma membrane	81.06	81.75
KRH08796	Soybean	cytosol	16.65	79.31
KRH38312	Soybean	endoplasmic reticulum	70.33	71.36
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	70.81	71.07
PGSC0003DMT400051401	Potato	endoplasmic reticulum	70.81	70.72
KRH08780	Soybean	extracellular, plasma membrane	69.6	70.62
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	70.69	70.01
KRH08789	Soybean	cytosol	27.5	68.06
Bra027756.1-P	Field mustard	endoplasmic reticulum	68.03	67.87
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	51.27	65.18
Os01t0226400-01	Rice	plasma membrane	65.38	64.52
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	65.02	64.47
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	65.26	64.33
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	65.02	64.17
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	64.9	64.05
Zm00001d008983_P001	Maize	vacuole	65.14	63.83
Zm00001d039315_P003	Maize	vacuole	64.54	63.61
EES00021	Sorghum	endoplasmic reticulum	64.42	63.05
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	18.58	39.29
Bra026316.1-P	Field mustard	endoplasmic reticulum	18.21	38.52
Bra029063.1-P	Field mustard	endoplasmic reticulum	17.49	37.08
Bra003048.1-P	Field mustard	endoplasmic reticulum	17.61	36.78
Bra004917.1-P	Field mustard	cytosol	12.42	32.29
Bra005414.1-P	Field mustard	cytosol	15.08	31.89
Bra018640.1-P	Field mustard	cytosol	14.72	28.37
Bra000503.1-P	Field mustard	cytosol	14.48	27.71
Bra012009.1-P	Field mustard	cytosol	14.48	27.71
Bra039332.1-P	Field mustard	cytosol	14.23	27.0
Bra018548.1-P	Field mustard	plastid	38.6	26.25
Bra014239.1-P	Field mustard	mitochondrion	31.6	26.23
Bra000878.1-P	Field mustard	plastid	39.08	25.88
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	30.4	25.4
Bra032579.1-P	Field mustard	plastid	35.1	25.37
Bra036265.1-P	Field mustard	plastid	39.45	25.35
Bra003561.1-P	Field mustard	cytosol	16.16	25.24
Bra008479.1-P	Field mustard	cytosol	15.92	25.0
Bra032982.1-P	Field mustard	plastid	18.94	24.23
Bra022979.1-P	Field mustard	plastid	15.8	22.7
Bra033356.1-P	Field mustard	cytosol, plastid	37.39	20.79

Protein Annotations

EnsemblPlants:Bra026293.1	EnsemblPlants:Bra026293.1-P	EnsemblPlantsGene:Bra026293	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
InterPro:P-loop_NTPase	PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	PFAM:PF00004	ScanProsite:PS00674	SEG:seg
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002543F29	UniProt:M4EBY4	MapMan:35.1	:

Description

AT4G28000 (E=0.0) | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA01:+:10195605..10199570

Molecular Weight (calculated)

92583.4 Da

IEP (calculated)

5.291

GRAVY (calculated)

-0.428

Length

829 amino acids

Sequence
(BLAST)

001: MEQKSVLFSA LGVSVGLGLG LASGQGLGKW ANGSVAADDG LTGEKIEQEL ARQIVDGRES SVTFDEFPYF LSEKTRLLLT SAAYVHLKQF DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKMQSKYGCI KKEPCHKRSI SEMTLDKMSN LMESFSMLTQ REETRGTLRR LTSGNDLTSR
201: GFEGSSHPNR LKRNASAASD ISSISSRSAS SVSASTKRST NLCFDEKLFL QSLYKVLVSV SETNPIIIYL RDVEKLIQSE RFYKLFQRLL TKLSGPVLLL
301: GSRLLEPEDD CQEVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSICHA DTMFLSSHIE EIVVSAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GSKYPENSLK LDRNTDSKGE ESEEIVKSES KSETVPANKN DLESSIPAAK NECPLPPKAP EVAPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKESLQ ELVMLPLRRP DLFKGGLLKP CRGILLFGPP GTGKTMMAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAGKVS PTIICVEEVD SMLGQRTRAG EHEAMRKIKN EFMTHWDGLM SNSGDRILVL AATNRPFDLD EAIIRRFERR IMVGLPSVES REKILRTLLS
701: KEKTENLDFH ELAQMTDGYS GSDLKNFCTT AAYRPVRELI KQECLKDQER KKREEPEKSS EEGSEEKEEA SEERVITLRA LSMEDMRVAK SQVAASFAAE
801: GAGMNELKQW NDLYGEGGSR KKEQLSYFL

Best Arabidopsis Sequence Match ( AT4G28000.1 )
(BLAST)

001: MEQKSVLFSA LGVGVGLGIG LASGQSLGKW ANGSISAEDG LTGEKIEQEL VRQIVDGRES SVTFDEFPYY LSEKTRLLLT SAAYVHLKQS DISKHTRNLA
101: PGSKAILLSG PAEFYQQMLA KALAHYFESK LLLLDITDFS IKIQSKYGCV KKEPSHKRSI SELTMDKMSN LMGSISVLSQ KEATRGTLRR HTSGNDLHSR
201: GFDVTSQPPR LKRNASAASD MSSISSRSAT SVSASSKRSA NLCFDERLFL QSLYKVLVSI SETNPIIIYL RDVEKLCQSE RFYKLFQRLL TKLSGPVLVL
301: GSRLLEPEDD CQEVGEGISA LFPYNIEIRP PEDENQLMSW KTRFEDDMKV IQFQDNKNHI AEVLAANDLE CDDLGSICHA DTMFLSSHIE EIVVSAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLNILQE GQGCFEDSLK LDTNIDSKVE EGEGITKSES KSETTVPENK NESDTSIPAA KNECPLPPKA PEVAPDNEFE
501: KRIRPEVIPA NEIGVTFADI GSLDETKESL QELVMLPLRR PDLFKGGLLK PCRGILLFGP PGTGKTMMAK AIANEAGASF INVSMSTITS KWFGEDEKNV
601: RALFTLAAKV SPTIIFVDEV DSMLGQRTRV GEHEAMRKIK NEFMTHWDGL MSNAGDRILV LAATNRPFDL DEAIIRRFER RIMVGLPSVE SREKILRTLL
701: SKEKTENLDF QELAQMTDGY SGSDLKNFCT TAAYRPVREL IKQECLKDQE RRKREEAEKN SEEGSEAKEE VSEERGITLR PLSMEDMKVA KSQVAASFAA
801: EGAGMNELKQ WNDLYGEGGS RKKEQLSYFL

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G28000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.