Factsheet for Bra018548.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91317	Canola	plastid	83.18	95.84
CDX97266	Canola	plastid	88.19	95.05
Bra000878.1-P	Field mustard	plastid	88.35	86.02
Os11t0661400-01	Rice	cytosol	16.98	85.89
Bra036265.1-P	Field mustard	plastid	89.5	84.57
AT4G02480.1	Thale cress	plastid	86.05	82.92
Zm00001d029385_P001	Maize	cytosol	12.47	79.58
Bra032579.1-P	Field mustard	plastid	67.92	72.19
Zm00001d049686_P001	Maize	plastid	13.86	70.71
TraesCS1B01G120800.1	Wheat	cytosol	13.62	65.61
GSMUA_Achr11P...	Banana	cytosol	37.82	65.39
KRH71559	Soybean	cytosol	58.08	64.01
Solyc09g074950.2.1	Tomato	plastid	63.17	62.25
KRH71560	Soybean	nucleus	63.08	61.87
VIT_07s0005g00200.t01	Wine grape	plastid	65.05	61.62
Bra033356.1-P	Field mustard	cytosol, plastid	75.06	61.37
KRH31896	Soybean	nucleus	61.36	61.01
KRH31895	Soybean	nucleus	62.26	60.87
Solyc06g084530.2.1	Tomato	extracellular, nucleus	62.26	60.67
HORVU7Hr1G026880.14	Barley	cytosol	23.13	60.65
GSMUA_Achr8P33760_001	Banana	cytosol	53.98	59.6
Os03t0344700-01	Rice	cytosol	37.24	58.58
GSMUA_Achr3P00740_001	Banana	mitochondrion	54.96	58.41
GSMUA_Achr11P...	Banana	cytosol	42.82	58.06
GSMUA_Achr8P10090_001	Banana	cytosol	50.7	56.85
KXG29076	Sorghum	plastid	54.72	54.01
TraesCS4A01G169300.15	Wheat	plastid	53.49	52.88
TraesCS4D01G145100.12	Wheat	plastid	53.24	52.85
TraesCS7B01G028300.1	Wheat	cytosol	34.04	52.6
Zm00001d007698_P002	Maize	plastid	54.55	52.53
HORVU2Hr1G019730.5	Barley	cytosol, plastid	45.2	52.48
EES16128	Sorghum	cytosol, plastid	40.11	52.47
Zm00001d007139_P007	Maize	cytosol, plastid	45.2	52.13
Zm00001d048689_P004	Maize	plastid	53.57	52.07
TraesCS4B01G126300.7	Wheat	nucleus	53.73	52.07
Os07t0672500-02	Rice	cytosol, plastid	45.78	51.62
TraesCS2A01G113900.1	Wheat	cytosol	46.6	51.59
TraesCS2B01G132900.3	Wheat	cytosol, plastid	46.35	51.36
OQU90457	Sorghum	cytosol, plastid	46.02	51.28
HORVU4Hr1G033300.1	Barley	cytosol	53.9	50.73
TraesCS2D01G114500.1	Wheat	cytosol, plastid	46.68	50.18
EER92288	Sorghum	cytosol	44.87	49.28
TraesCS4B01G155600.1	Wheat	cytosol	44.3	49.09
TraesCS4A01G142800.3	Wheat	cytosol	44.22	49.04
TraesCS4D01G168600.1	Wheat	cytosol	44.38	48.87
Zm00001d029120_P004	Maize	cytosol	44.79	48.49
TraesCS7D01G127200.1	Wheat	cytosol	38.72	47.77
Zm00001d047494_P007	Maize	cytosol	43.23	47.65
TraesCS7A01G128400.2	Wheat	cytosol, plastid	39.21	47.14
HORVU4Hr1G046420.6	Barley	cytosol, plastid	44.63	47.1
OQU79278	Sorghum	cytosol, plastid	33.96	44.9
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	13.86	43.11
Bra026316.1-P	Field mustard	endoplasmic reticulum	13.7	42.6
Bra003048.1-P	Field mustard	endoplasmic reticulum	13.54	41.56
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	26.58	39.46
Bra029063.1-P	Field mustard	endoplasmic reticulum	12.63	39.39
Bra029104.1-P	Field mustard	extracellular, plasma membrane	26.58	39.37
Bra003102.1-P	Field mustard	extracellular, plasma membrane	26.42	39.17
Bra027756.1-P	Field mustard	endoplasmic reticulum	26.5	38.87
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	26.25	38.6
Bra005414.1-P	Field mustard	cytosol	10.91	33.93
Bra004917.1-P	Field mustard	cytosol	8.78	33.54
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	26.09	32.06
Bra014239.1-P	Field mustard	mitochondrion	26.0	31.73
Bra018640.1-P	Field mustard	cytosol	10.25	29.07
Bra003561.1-P	Field mustard	cytosol	12.55	28.81
Bra039332.1-P	Field mustard	cytosol	10.17	28.38
Bra008479.1-P	Field mustard	cytosol	12.22	28.22
Bra012009.1-P	Field mustard	cytosol	10.01	28.18
Bra000503.1-P	Field mustard	cytosol	10.01	28.18
Bra032982.1-P	Field mustard	plastid	13.62	25.62
Bra022979.1-P	Field mustard	plastid	11.24	23.74

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra018548	EnsemblPlants:Bra018548.1	EnsemblPlants:Bra018548.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	UniProt:M4DPV7	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF70	SMART:SM00382	InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879
SUPFAM:SSF52540	UniParc:UPI000254732C	SEG:seg	:	:	:

Description

AT4G02480 (E=0.0) | AAA-type ATPase family protein

Coordinates

chrA05:+:9155500..9161716

Molecular Weight (calculated)

132043.0 Da

IEP (calculated)

5.961

GRAVY (calculated)

-0.395

Length

1219 amino acids

Sequence
(BLAST)

0001: MVETRRSSSA SKRFCSSSSS PEPSSSSPRP SKRSKVKIDA ALEPAAGSTS AASEENQGPV SDPGEPDLGS SDPLAEKTVA TDVPVMENSP EDDEVLATPT
0101: LAGERSKAGK KRANAPWAKL LSQYPQNPHR IMRGPVFTVG RLGCNLSIKD HSMPSTLCEL KQAKHGAPSV ASLEITGNGF LVQVNGKCYQ KSSCVHLRGG
0201: DEVIFSVSGR HAYIFQPLKD ENLAAPDKAS SVNLCEARGA PHLETRAGDS SAGDGASILA SLSKYRNLRL LPPIAKSAKR QKNPEVPVIP SSCNDCISDT
0301: DMNDADSDND DAAITSVEKA AASTSDTASE DLNADGSGLD PFQEDDGGNT PASGYEVRSV LDIRGISKLL DERREVRESL RDSDISSTIS TRRQEFKDSL
0401: RGGVLKAQDI EVSLEKFPYF LSATTKDVLI ASMYVHMNGG SKFAKYASDL PTTCPRILLS GPAGSDIYQE MLAKALAKNL GAKVMIVDSL LLPGGSPARE
0501: AESSKESPRR ERLSTLAKRA VQDAQALQHK KSTSSVDADI TGGSTLSSQA LPKQEVSTAT SKSYTFKAGD RVKFLGPPSS AVSSLQGSPL RGPTIGFRGK
0601: VVLAFEDNCS SKIGIRFDRP VPDGNDLGGL CEEDHGFFCA ASSLRLDGSS GDDADRLAVN EIFEVALSEG EGGSLILFLK DIEKSLVGNS DVYATLKSKL
0701: ENLPENIVVM ASQTQLDSRK EKSHPGGFLF TKFGGNQTAL LDLAFPDIGK LHEKSKEASK SVKQITRLFP NKVAIQLPQD EALLLDWKEK LDRDTELLKV
0801: QGNITSILGI LTKNRLDCPD LETLCIKDQS LLPESVEKVV GWAFSHHLMN CSEPTIKDNK LVISAESITY GLQMLHGVQN ENKSLKKSLK DVVTENEFEK
0901: KLLSDVIPPS DIGVSFDDIG ALENVKDTLK ELVMLPLQRP ELFGKGQLTK PTKGILLFGP PGTGKTMLAK AVATEAGANF INISMSSITS KWFGEGEKYV
1001: KAVFSLASKI APSVIFVDEV DSMLGRRENP GEHEAMRKMK NEFMVNWDGL RTKDRERVLV LAATNRPFDL DEAVIRRLPR RLMVNLPDAT NRSKILSVIL
1101: SKEEMAPDVD LEAIANMTDG YSGSDLKNLC VTAAHLPIRE ILEKEKKEKT VAEAENRPKP PLYSCTDIRP LTMNDFKAAH EQVCASVSTD SSNMNELQQW
1201: NELYGEGGSR KKTSLSYFM

Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)

0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.