Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G126300.7 | Wheat | nucleus | 98.86 | 96.5 |
| TraesCS4A01G169300.15 | Wheat | plastid | 96.58 | 96.19 |
| Os11t0661400-01 | Rice | cytosol | 18.57 | 94.61 |
| HORVU4Hr1G033300.1 | Barley | cytosol | 97.07 | 92.05 |
| Zm00001d029385_P001 | Maize | cytosol | 13.27 | 85.34 |
| KXG29076 | Sorghum | plastid | 84.12 | 83.64 |
| Zm00001d007698_P002 | Maize | plastid | 84.04 | 81.52 |
| Zm00001d048689_P004 | Maize | plastid | 82.41 | 80.7 |
| Zm00001d049686_P001 | Maize | plastid | 14.33 | 73.64 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 60.18 | 66.94 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 59.45 | 63.64 |
| CDY32485 | Canola | plastid | 50.73 | 56.53 |
| CDX91317 | Canola | plastid | 48.7 | 56.52 |
| KRH71559 | Soybean | cytosol | 50.81 | 56.42 |
| Solyc09g074950.2.1 | Tomato | plastid | 56.68 | 56.27 |
| CDX89933 | Canola | plastid | 52.85 | 56.14 |
| Solyc06g084530.2.1 | Tomato | extracellular, nucleus | 57.0 | 55.96 |
| CDX90936 | Canola | plastid | 49.67 | 55.76 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 58.31 | 55.63 |
| CDX97266 | Canola | plastid | 51.14 | 55.53 |
| CDY18129 | Canola | cytosol, plastid | 54.56 | 55.19 |
| KRH71560 | Soybean | nucleus | 55.54 | 54.87 |
| KRH31895 | Soybean | nucleus | 55.62 | 54.77 |
| TraesCS7D01G127200.1 | Wheat | cytosol | 43.97 | 54.66 |
| Bra018548.1-P | Field mustard | plastid | 52.85 | 53.24 |
| KRH31896 | Soybean | nucleus | 53.09 | 53.18 |
| CDY22053 | Canola | plastid | 52.85 | 52.81 |
| Bra000878.1-P | Field mustard | plastid | 53.66 | 52.64 |
| CDY18018 | Canola | plastid | 52.28 | 52.62 |
| AT1G02890.1 | Thale cress | plastid | 53.34 | 52.57 |
| AT4G02480.1 | Thale cress | plastid | 53.66 | 52.09 |
| CDY50381 | Canola | plastid | 50.81 | 51.96 |
| TraesCS2D01G114500.1 | Wheat | cytosol, plastid | 47.96 | 51.94 |
| Bra032579.1-P | Field mustard | plastid | 48.45 | 51.87 |
| TraesCS4D01G168600.1 | Wheat | cytosol | 46.74 | 51.85 |
| Bra036265.1-P | Field mustard | plastid | 53.09 | 50.54 |
| Bra033356.1-P | Field mustard | cytosol, plastid | 53.75 | 44.27 |
| TraesCS7D01G381400.1 | Wheat | endoplasmic reticulum | 12.87 | 42.47 |
| TraesCS3D01G159200.1 | Wheat | cytosol, vacuole | 26.06 | 38.28 |
| TraesCS1D01G431700.1 | Wheat | mitochondrion | 26.22 | 37.84 |
| TraesCS3D01G228100.4 | Wheat | cytosol | 24.59 | 37.61 |
| TraesCS3D01G271500.1 | Wheat | cytosol | 10.91 | 33.5 |
| TraesCS7D01G186200.1 | Wheat | mitochondrion | 25.33 | 32.0 |
| TraesCS7D01G060200.1 | Wheat | cytosol | 12.3 | 31.66 |
| TraesCS6D01G284600.1 | Wheat | mitochondrion | 25.24 | 31.54 |
| TraesCS3D01G294200.1 | Wheat | plastid | 10.91 | 30.25 |
| TraesCS6D01G122900.1 | Wheat | cytosol | 10.26 | 28.83 |
| TraesCS3D01G053600.1 | Wheat | cytosol | 10.02 | 28.08 |
| TraesCS3D01G265900.1 | Wheat | cytosol | 11.56 | 27.26 |
| TraesCS5D01G123800.1 | Wheat | nucleus | 14.01 | 25.0 |
| CDX89934 | Canola | cytosol | 0.33 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | ncoils:Coil | InterPro:FHA_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | InterPro:IPR000253 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 |
| PANTHER:PTHR23074 | PANTHER:PTHR23074:SF70 | SMART:SM00382 | InterPro:SMAD_FHA_dom_sf | SUPFAM:SSF49879 | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS4D01G145100 | EnsemblPlants:TraesCS4D01G145100.12 | TIGR:cd00009 | TIGR:cd00060 | SEG:seg | : |
Description
No Description!
Coordinates
chr4D:+:134124278..134134922
Molecular Weight (calculated)
133867.0 Da
IEP (calculated)
6.660
GRAVY (calculated)
-0.470
Length
1228 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVETRRSSAA KRPSSTSPPP GSPSASAPPP KRPKVRPLSP RGSDKNLAPD STDLSPVPRQ AEPPASPTSS APGRAEEDSE AAAATRSAGL ADDALTPAIK
0101: DQGGDKRAAA AAAESSRRRK ETPPQQHAAP WAKLLSQCSQ SPHLPISVPQ FSVGQSKRCN LLLKDQSVSE ILCKLRHVEQ GGPCELEVIG DKGVVLLNGR
0201: AVNPGMKVPL TGGDEVVFSS CGKHAYIFQH PLNDKVAKAV TSSAVGLLEP PVAGVKHIHM ENRTEVTSTV AGTEMLASVS SQSKDLPAVP PASAEEENQR
0301: VVQPIISSAS DKSKGHCISP DKECENGENT NEANSNIEDS PMDVAATPIS PDAVANDTSR QNGFGSDAHL DEIALEDQRD LIRDLNTSAS LPPSRCQAFK
0401: DAMKQGIISP SDIEVTFENF PYYLSENTKN VLLSCSFLHL EKKEFIKQFS EISSINQRIL LSGPSGSEIY QETLIKALAK HFGARLLVVD SLLLPGVPSK
0501: DPETQKDVGK ADKSGDKAGG EKLTILHKHR SSLADTMHFR RPAAPTSSVN ADIVGTSTLH SATLPKQESS TATSKGYTFR EGERVRYVGP AQTPSGIHRG
0601: PSYGYRGRVM LAFEENGSSK IGVRFDKQIP DGNDLGGLCE EDHGFFCSAE LLRPDFSGSE EVERLAMTEL IEVISEESKI GSLIVLLKDV EKSFTGITES
0701: FSSLRNKLEL LPPGVLIIGS HTQMDSRKEK AHPGGFLFTK FASSSQTLFD LFPDSFGSRL HERNKESPKA MKHLNKLFPN KISIQLPQDE ALLTSWKQQL
0801: DRDVETLKAK SNIGSIRTFL NRSAIECNDL EELFIKDQSL TNENVDKIVG YAVSYHLKHN KVETSKDGKL IITSGSLKHG LDMLQSIHSD NKSSKKSLKD
0901: VATENEFEKR LLADVIPPND IGVTFDDIGA LENVKETLKE LVMLPLQRPE LFCKGQLTKP CKGILLFGPP GTGKTMLAKA VATEAGANFI NISMSSITSK
1001: WFGEGEKYVK AVFSLASKIS PSVIFIDEVD SMLGRRENPG EHEAMRKMKN EFMVNWDGLR TKDKERVLVL GATNRPFDLD EAVIRRFPRR LMVNLPDASN
1101: REKILKVILA KEELGQDTDL ESLANMTDGY SGSDLKNLCV TAAHYPIREI LEKEKKEKNV AKSEGRPEPA LHGSEDVRPL SLDDFKSAHE QVCASVSSDS
1201: ANMNELVQWN DLYGEGGSRK KKALSYFM
0101: DQGGDKRAAA AAAESSRRRK ETPPQQHAAP WAKLLSQCSQ SPHLPISVPQ FSVGQSKRCN LLLKDQSVSE ILCKLRHVEQ GGPCELEVIG DKGVVLLNGR
0201: AVNPGMKVPL TGGDEVVFSS CGKHAYIFQH PLNDKVAKAV TSSAVGLLEP PVAGVKHIHM ENRTEVTSTV AGTEMLASVS SQSKDLPAVP PASAEEENQR
0301: VVQPIISSAS DKSKGHCISP DKECENGENT NEANSNIEDS PMDVAATPIS PDAVANDTSR QNGFGSDAHL DEIALEDQRD LIRDLNTSAS LPPSRCQAFK
0401: DAMKQGIISP SDIEVTFENF PYYLSENTKN VLLSCSFLHL EKKEFIKQFS EISSINQRIL LSGPSGSEIY QETLIKALAK HFGARLLVVD SLLLPGVPSK
0501: DPETQKDVGK ADKSGDKAGG EKLTILHKHR SSLADTMHFR RPAAPTSSVN ADIVGTSTLH SATLPKQESS TATSKGYTFR EGERVRYVGP AQTPSGIHRG
0601: PSYGYRGRVM LAFEENGSSK IGVRFDKQIP DGNDLGGLCE EDHGFFCSAE LLRPDFSGSE EVERLAMTEL IEVISEESKI GSLIVLLKDV EKSFTGITES
0701: FSSLRNKLEL LPPGVLIIGS HTQMDSRKEK AHPGGFLFTK FASSSQTLFD LFPDSFGSRL HERNKESPKA MKHLNKLFPN KISIQLPQDE ALLTSWKQQL
0801: DRDVETLKAK SNIGSIRTFL NRSAIECNDL EELFIKDQSL TNENVDKIVG YAVSYHLKHN KVETSKDGKL IITSGSLKHG LDMLQSIHSD NKSSKKSLKD
0901: VATENEFEKR LLADVIPPND IGVTFDDIGA LENVKETLKE LVMLPLQRPE LFCKGQLTKP CKGILLFGPP GTGKTMLAKA VATEAGANFI NISMSSITSK
1001: WFGEGEKYVK AVFSLASKIS PSVIFIDEVD SMLGRRENPG EHEAMRKMKN EFMVNWDGLR TKDKERVLVL GATNRPFDLD EAVIRRFPRR LMVNLPDASN
1101: REKILKVILA KEELGQDTDL ESLANMTDGY SGSDLKNLCV TAAHYPIREI LEKEKKEKNV AKSEGRPEPA LHGSEDVRPL SLDDFKSAHE QVCASVSSDS
1201: ANMNELVQWN DLYGEGGSRK KKALSYFM
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.