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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033356.1-P Field mustard cytosol, plastid 98.08 17.17
CDY71574 Canola endoplasmic reticulum, plasma membrane 2.68 1.79
CDY20251 Canola endoplasmic reticulum 2.68 1.74
Os11t0661400-01 Rice cytosol 1.53 1.66
CDX92836 Canola endoplasmic reticulum, plasma membrane 2.3 1.53
CDY29857 Canola endoplasmic reticulum, plasma membrane 2.3 1.53
CDY19035 Canola endoplasmic reticulum 2.3 1.53
CDY30236 Canola endoplasmic reticulum 2.3 1.53
CDY55344 Canola endoplasmic reticulum 2.3 1.53
CDY14372 Canola endoplasmic reticulum 2.3 1.51
TraesCS1B01G120800.1 Wheat cytosol 1.15 1.19
CDX96166 Canola cytosol 1.53 0.59
CDY29873 Canola endoplasmic reticulum, extracellular, plasma membrane 1.53 0.57
CDX92857 Canola endoplasmic reticulum, extracellular, plasma membrane 1.53 0.57
GSMUA_Achr11P... Banana cytosol 1.53 0.57
CDY19014 Canola endoplasmic reticulum, extracellular 1.53 0.56
GSMUA_Achr11P... Banana cytosol 1.92 0.56
CDX89214 Canola extracellular, plasma membrane 1.53 0.53
Zm00001d029385_P001 Maize cytosol 0.38 0.52
Os03t0344700-01 Rice cytosol 1.53 0.52
CDY47077 Canola endoplasmic reticulum, plasma membrane 0.77 0.51
CDY49165 Canola extracellular, plasma membrane 1.53 0.51
CDY19639 Canola extracellular, vacuole 1.53 0.5
CDY56163 Canola extracellular, vacuole 1.53 0.5
CDY51824 Canola extracellular, plasma membrane 1.53 0.5
CDY08360 Canola endoplasmic reticulum 1.53 0.48
CDY38192 Canola plasma membrane 1.53 0.48
CDX92656 Canola cytosol 0.77 0.46
HORVU7Hr1G026880.14 Barley cytosol 0.77 0.43
EES16128 Sorghum cytosol, plastid 1.53 0.43
HORVU2Hr1G019730.5 Barley cytosol, plastid 1.53 0.38
Zm00001d007139_P007 Maize cytosol, plastid 1.53 0.38
CDX91317 Canola plastid 1.53 0.38
Os07t0672500-02 Rice cytosol, plastid 1.53 0.37
GSMUA_Achr8P10090_001 Banana cytosol 1.53 0.37
CDX90936 Canola plastid 1.53 0.37
OQU90457 Sorghum cytosol, plastid 1.53 0.37
TraesCS4A01G142800.3 Wheat cytosol 1.53 0.36
TraesCS2B01G132900.3 Wheat cytosol, plastid 1.53 0.36
TraesCS4B01G155600.1 Wheat cytosol 1.53 0.36
TraesCS2A01G113900.1 Wheat cytosol 1.53 0.36
CDY32485 Canola plastid 1.53 0.36
GSMUA_Achr8P33760_001 Banana cytosol 1.53 0.36
KRH71559 Soybean cytosol 1.53 0.36
Zm00001d047494_P007 Maize cytosol 1.53 0.36
TraesCS4D01G168600.1 Wheat cytosol 1.53 0.36
EER92288 Sorghum cytosol 1.53 0.36
Zm00001d029120_P004 Maize cytosol 1.53 0.36
CDX97266 Canola plastid 1.53 0.35
TraesCS2D01G114500.1 Wheat cytosol, plastid 1.53 0.35
GSMUA_Achr3P00740_001 Banana mitochondrion 1.53 0.35
HORVU4Hr1G046420.6 Barley cytosol, plastid 1.53 0.35
CDX89933 Canola plastid 1.53 0.35
CDY50381 Canola plastid 1.53 0.33
CDY18129 Canola cytosol, plastid 1.53 0.33
CDY18018 Canola plastid 1.53 0.33
KRH31896 Soybean nucleus 1.53 0.33
TraesCS4D01G145100.12 Wheat plastid 1.53 0.33
CDY22053 Canola plastid 1.53 0.33
TraesCS4A01G169300.15 Wheat plastid 1.53 0.32
KXG29076 Sorghum plastid 1.53 0.32
Solyc09g074950.2.1 Tomato plastid 1.53 0.32
KRH71560 Soybean nucleus 1.53 0.32
AT1G02890.1 Thale cress plastid 1.53 0.32
KRH31895 Soybean nucleus 1.53 0.32
Solyc06g084530.2.1 Tomato extracellular, nucleus 1.53 0.32
Zm00001d048689_P004 Maize plastid 1.53 0.32
TraesCS4B01G126300.7 Wheat nucleus 1.53 0.32
Zm00001d007698_P002 Maize plastid 1.53 0.32
VIT_07s0005g00200.t01 Wine grape plastid 1.53 0.31
HORVU4Hr1G033300.1 Barley cytosol 1.53 0.31
CDY03591 Canola cytosol, mitochondrion, plastid 1.15 0.3
CDY45052 Canola mitochondrion 1.15 0.3
CDY33415 Canola cytosol, mitochondrion 1.15 0.3
CDY42204 Canola cytosol, mitochondrion, plastid 1.15 0.29
CDX84641 Canola cytosol 0.38 0.27
CDX79566 Canola cytosol 0.38 0.27
CDX84306 Canola cytosol 0.38 0.26
CDY38752 Canola endoplasmic reticulum 0.38 0.26
TraesCS7B01G028300.1 Wheat cytosol 0.77 0.25
TraesCS7D01G127200.1 Wheat cytosol 0.77 0.2
TraesCS7A01G128400.2 Wheat cytosol, plastid 0.77 0.2
CDY28494 Canola plastid 0.38 0.15
CDY34176 Canola plastid 0.38 0.15
OQU79278 Sorghum cytosol, plastid 0.38 0.11
CDX71438 Canola cytosol 0.0 0.0
CDX74745 Canola cytosol 0.0 0.0
CDX79393 Canola cytosol 0.0 0.0
CDX83275 Canola cytosol 0.0 0.0
CDX93578 Canola cytosol 0.0 0.0
CDX95077 Canola cytosol 0.0 0.0
CDY04504 Canola cytosol 0.0 0.0
CDY17260 Canola cytosol 0.0 0.0
CDY18925 Canola plastid 0.0 0.0
CDY24618 Canola endoplasmic reticulum 0.0 0.0
CDY27380 Canola nucleus 0.0 0.0
CDY31186 Canola cytosol 0.0 0.0
CDY37046 Canola cytosol 0.0 0.0
CDY37590 Canola cytosol 0.0 0.0
CDY38662 Canola cytosol 0.0 0.0
CDY57698 Canola cytosol 0.0 0.0
Zm00001d049686_P001 Maize plastid 0.0 0.0
Protein Annotations
KEGG:00730+2.7.6.2Gene3D:3.40.50.10240MapMan:7.2.3GO:A0A078DN33EnsemblPlants:CDX89934ProteinID:CDX89934
ProteinID:CDX89934.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004788GO:GO:0005488
GO:GO:0005524GO:GO:0006772GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009229
GO:GO:0009987GO:GO:0016740GO:GO:0030975EnsemblPlantsGene:GSBRNA2T00150418001InterPro:IPR036759PFAM:PF04263
PFAM:PF04265PIRSF:PIRSF031057PANTHER:PTHR13622PANTHER:PTHR13622:SF9MetaCyc:PWY-6898MetaCyc:PWY-6907
MetaCyc:PWY-6908MetaCyc:PWY-7356SMART:SM00983SUPFAM:SSF63862SUPFAM:SSF63999TIGRFAMs:TIGR01378
InterPro:TPK_B1-bd_sfInterPro:TPK_catalyticInterPro:TPK_catalytic_sfInterPro:Thi_PPkinaseInterPro:Thiamin_PyroPKinase_B1-bdInterPro:Thiamin_pyrophosphokinase_euk
UniPathway:UPA00060UniParc:UPI0004EECD0A::::
Description
BnaA10g01480D
Coordinates
chrLK031861:+:831915..833769
Molecular Weight (calculated)
29285.1 Da
IEP (calculated)
5.334
GRAVY (calculated)
-0.225
Length
261 amino acids
Sequence
(BLAST)
001: MEEVMIHSSS FLLPSIPADE ASAYAIVVLN QNLPRFTPLL WEHAKLRLCA DGGANRIYDE LPLFFPHEDA LLIRNRYKPD VIKGDMDSIR PDVLNFYVSL
101: GTKVIDESHD QDTTDLDKCI LFIRDSTLNQ ESCRLQILAT GALGGRFDHE AGNLNVLYRY PDTRIILLSD DCLIQLLPKT HRHEIRVQPS LQGPHCGLIP
201: IGAPSAKTTT TGLQWDLNNT EMRFGGLVST SNMVKGEKIT VESDSDLLWT ISIKKQDSTR P
Best Arabidopsis Sequence Match ( AT1G02880.3 )
(BLAST)
001: MSAMDVMIHS SSFLLPCDET STGTRYALVV LNQSLPRFTP LLWEHAKLRL CADGGANRIY DELPLFFPNE DALAIRNRYK PDVIKGDMDS IRRDVLDFYI
101: NLGTKVIDES HDQDTTDLDK CILYIRHSTL NQETSGLQIL ATGALGGRFD HEAGNLNVLY RYPDTRIVLL SDDCLIQLLP KTHRHEIHIQ SSLEGPHCGL
201: IPIGTPSAKT TTSGLQWDLS NTEMRFGGLI STSNLVKEEK ITVESDSDLL WTISIKKTGL SIQDHTP
Arabidopsis Description
TPK1thiamin pyrophosphokinase1 [Source:TAIR;Acc:AT1G02880]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.