Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34176 | Canola | plastid | 98.46 | 98.46 |
| AT3G27120.1 | Thale cress | nucleus | 89.2 | 85.0 |
| VIT_14s0068g02130.t01 | Wine grape | nucleus | 71.3 | 69.16 |
| KRH57680 | Soybean | nucleus | 67.59 | 66.46 |
| KRG94255 | Soybean | nucleus | 67.13 | 66.01 |
| PGSC0003DMT400052226 | Potato | nucleus | 66.2 | 64.22 |
| GSMUA_Achr6P27610_001 | Banana | cytosol | 64.81 | 64.12 |
| Solyc02g094100.2.1 | Tomato | nucleus | 65.43 | 63.47 |
| TraesCS5D01G123800.1 | Wheat | nucleus | 63.89 | 60.17 |
| TraesCS5B01G110300.1 | Wheat | nucleus | 63.73 | 60.03 |
| TraesCS5A01G109500.1 | Wheat | nucleus | 63.58 | 59.88 |
| Zm00001d041083_P005 | Maize | nucleus | 61.88 | 59.14 |
| KXG23422 | Sorghum | nucleus | 62.04 | 58.43 |
| HORVU5Hr1G029910.10 | Barley | cytosol, mitochondrion, nucleus | 58.49 | 53.16 |
| CDY18925 | Canola | plastid | 24.23 | 43.37 |
| CDX84306 | Canola | cytosol | 22.69 | 38.08 |
| CDX84641 | Canola | cytosol | 21.91 | 37.87 |
| CDY17260 | Canola | cytosol | 22.22 | 37.6 |
| CDX79566 | Canola | cytosol | 21.76 | 37.5 |
| CDX74745 | Canola | cytosol | 26.85 | 36.63 |
| Os12t0443800-01 | Rice | nucleus | 20.37 | 34.55 |
| CDY37046 | Canola | cytosol | 26.85 | 34.05 |
| CDX93578 | Canola | cytosol | 21.6 | 32.56 |
| CDY31186 | Canola | cytosol | 21.76 | 32.49 |
| CDX95077 | Canola | cytosol | 21.6 | 32.48 |
| CDX71438 | Canola | cytosol | 21.45 | 32.4 |
| CDY04504 | Canola | cytosol | 21.45 | 32.18 |
| CDX83275 | Canola | cytosol | 21.45 | 32.1 |
| CDY38662 | Canola | cytosol | 25.0 | 31.4 |
| CDY24618 | Canola | endoplasmic reticulum | 13.58 | 31.32 |
| CDY37590 | Canola | cytosol | 24.69 | 31.31 |
| CDX79393 | Canola | cytosol | 25.31 | 31.0 |
| CDY38752 | Canola | endoplasmic reticulum | 18.36 | 30.83 |
| CDY57698 | Canola | cytosol | 25.15 | 30.7 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 17.9 | 29.82 |
| CDY14372 | Canola | endoplasmic reticulum | 18.21 | 29.72 |
| CDY20251 | Canola | endoplasmic reticulum | 18.21 | 29.35 |
| CDY30236 | Canola | endoplasmic reticulum | 17.75 | 29.34 |
| CDY55344 | Canola | endoplasmic reticulum | 17.75 | 29.34 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 17.75 | 29.34 |
| CDY19035 | Canola | endoplasmic reticulum | 17.75 | 29.34 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 17.59 | 29.16 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 17.59 | 29.16 |
| CDX92656 | Canola | cytosol | 18.06 | 27.15 |
| CDY27380 | Canola | nucleus | 27.01 | 23.58 |
| CDX96166 | Canola | cytosol | 22.84 | 21.8 |
| CDY49165 | Canola | extracellular, plasma membrane | 23.77 | 19.72 |
| CDY19639 | Canola | extracellular, vacuole | 24.23 | 19.55 |
| CDY08360 | Canola | endoplasmic reticulum | 24.69 | 19.25 |
| CDY38192 | Canola | plasma membrane | 24.54 | 19.13 |
| CDY56163 | Canola | extracellular, vacuole | 23.77 | 19.13 |
| CDY51824 | Canola | extracellular, plasma membrane | 23.61 | 18.98 |
| CDX89214 | Canola | extracellular, plasma membrane | 18.83 | 16.09 |
| CDY33415 | Canola | cytosol, mitochondrion | 25.0 | 15.94 |
| CDY45052 | Canola | mitochondrion | 24.54 | 15.92 |
| CDX91317 | Canola | plastid | 25.77 | 15.78 |
| CDY32485 | Canola | plastid | 26.7 | 15.7 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 24.07 | 15.62 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 24.85 | 15.47 |
| CDX90936 | Canola | plastid | 26.08 | 15.45 |
| CDX89933 | Canola | plastid | 26.85 | 15.05 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 16.51 | 14.9 |
| CDX97266 | Canola | plastid | 25.93 | 14.85 |
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.05 | 14.77 |
| CDY18129 | Canola | cytosol, plastid | 27.16 | 14.5 |
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 15.59 | 14.41 |
| CDY50381 | Canola | plastid | 26.39 | 14.24 |
| CDY18018 | Canola | plastid | 26.23 | 13.93 |
| CDY22053 | Canola | plastid | 26.39 | 13.91 |
| CDX89934 | Canola | cytosol | 0.15 | 0.38 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:13.3.6.5.5.1 | Gene3D:3.40.50.300 | GO:A0A078GTI9 | UniProt:A0A078GTI9 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlants:CDY28494 | ProteinID:CDY28494 | ProteinID:CDY28494.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00040395001 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF09336 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF17 | SMART:SM00382 | SUPFAM:SSF52540 |
| UniParc:UPI0004EDFE48 | InterPro:Vps4_C | SEG:seg | : | : | : |
Description
BnaC02g36660DBnaC02g36660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTI9]
Coordinates
chrLK032221:+:146870..150772
Molecular Weight (calculated)
71532.1 Da
IEP (calculated)
8.268
GRAVY (calculated)
-0.533
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKRTSPFS SPLLKPPPPL TTPKVEEETE FWRKEVDENL KRLQSLLFGA DQFLEKSDFS SAQILGLRLL GFLDSRSVTE ADRAFIGPIR REVASKVDSA
101: LEGLVSDSDR QAFELAKTAP GLIFGSKGEF DVEKIKQSKH FHFHLSQSNG KGVKEMGERL DARKLIPKAS KPMMQARLTS LYGNSMVKPD SQRRPSVSNQ
201: ESTSEECVIV ERSHGVGFGT KRAHAEISNP TNHGEKEDGA ANGFVSAKTK LEMDARQKRG STGAPNSSLS PQGENNASAR GYGARSGGYL RRGYRGNFVP
301: PVKSSGNNVG NTTSRIGGKT DDTLDDSTRT CLEMLCGPDG ELPEKLRNLE PRLIEHVSNE IMDRDPNVRW DDIAGLEHAK KCVTEMVIWP LLRPDIFKGC
401: RSPGKGLLLF GPPGTGKTMI GKAIAGEAKA TFFYISASSL TSKWIGEGEK LVRALFGVAS CRQPAVIFVD EIDSLLSQRK SDGEHESSRR LKTQFLIEME
501: GFDSGSEQIL LIGATNRPQE LDEAARRRLT KRLYIPLPSS EARAWIIQNL LQKDGLFTLS EDDMNIICKL TEGYSGSDMK NLVKDATMGP LREALKRGIE
601: ITNLTKDDMR LVTLQDFKDA LQEVRPSVSQ NELGIYDNWN NQFGSLSL
101: LEGLVSDSDR QAFELAKTAP GLIFGSKGEF DVEKIKQSKH FHFHLSQSNG KGVKEMGERL DARKLIPKAS KPMMQARLTS LYGNSMVKPD SQRRPSVSNQ
201: ESTSEECVIV ERSHGVGFGT KRAHAEISNP TNHGEKEDGA ANGFVSAKTK LEMDARQKRG STGAPNSSLS PQGENNASAR GYGARSGGYL RRGYRGNFVP
301: PVKSSGNNVG NTTSRIGGKT DDTLDDSTRT CLEMLCGPDG ELPEKLRNLE PRLIEHVSNE IMDRDPNVRW DDIAGLEHAK KCVTEMVIWP LLRPDIFKGC
401: RSPGKGLLLF GPPGTGKTMI GKAIAGEAKA TFFYISASSL TSKWIGEGEK LVRALFGVAS CRQPAVIFVD EIDSLLSQRK SDGEHESSRR LKTQFLIEME
501: GFDSGSEQIL LIGATNRPQE LDEAARRRLT KRLYIPLPSS EARAWIIQNL LQKDGLFTLS EDDMNIICKL TEGYSGSDMK NLVKDATMGP LREALKRGIE
601: ITNLTKDDMR LVTLQDFKDA LQEVRPSVSQ NELGIYDNWN NQFGSLSL
001: MCGSVVSDSE REFEFHFWGF GHLGKEEERI MAGKRSSPFS SPLLRPPPEF LNVKEEGETE TPCWRKEVDE NLKRLQSLLF GADKFLEKSD FSSAQILGLR
101: LLGFLDSRSV TDADRDFIGP IRREVASKID LALEGLVSDS DRKAFELANT APGAIFGSKG GFDVEKIKQS KYFGFHVSQS NGKGVKEMEE RHDTDKLIPK
201: APKSMMQAKL TSLYGNSIGK PDNQRKTSVN NQDRASDECV IVERSHGFGF GTKRPHAETS SLANDGEVKE DGAPNGFVSA KIKLEMDVRQ KRGSTESPSS
301: CLSPQSDKNA LGRGYGSRSG GLRRGYRSNF VPPVKTNGNN VGNLTSRIGG KTDDALDDST RTCLEMLCGP DGELPEKLRN LEPRLIEHVS NEIMDRDPNV
401: RWDDIAGLEH AKKCVTEMVI WPLLRPDIFK GCRSPGKGLL LFGPPGTGKT MIGKAIAGEA KATFFYISAS SLTSKWIGEG EKLVRALFGV ASCRQPAVIF
501: VDEIDSLLSQ RKSDGEHESS RRLKTQFLIE MEGFDSGSEQ ILLIGATNRP QELDEAARRR LTKRLYIPLP SSEARAWIIQ NLLKKDGLFT LSDDDMNIIC
601: NLTEGYSGSD MKNLVKDATM GPLREALKRG IDITNLTKDD MRLVTLQDFK DALQEVRPSV SQNELGIYEN WNNQFGSLSL
101: LLGFLDSRSV TDADRDFIGP IRREVASKID LALEGLVSDS DRKAFELANT APGAIFGSKG GFDVEKIKQS KYFGFHVSQS NGKGVKEMEE RHDTDKLIPK
201: APKSMMQAKL TSLYGNSIGK PDNQRKTSVN NQDRASDECV IVERSHGFGF GTKRPHAETS SLANDGEVKE DGAPNGFVSA KIKLEMDVRQ KRGSTESPSS
301: CLSPQSDKNA LGRGYGSRSG GLRRGYRSNF VPPVKTNGNN VGNLTSRIGG KTDDALDDST RTCLEMLCGP DGELPEKLRN LEPRLIEHVS NEIMDRDPNV
401: RWDDIAGLEH AKKCVTEMVI WPLLRPDIFK GCRSPGKGLL LFGPPGTGKT MIGKAIAGEA KATFFYISAS SLTSKWIGEG EKLVRALFGV ASCRQPAVIF
501: VDEIDSLLSQ RKSDGEHESS RRLKTQFLIE MEGFDSGSEQ ILLIGATNRP QELDEAARRR LTKRLYIPLP SSEARAWIIQ NLLKKDGLFT LSDDDMNIIC
601: NLTEGYSGSD MKNLVKDATM GPLREALKRG IDITNLTKDD MRLVTLQDFK DALQEVRPSV SQNELGIYEN WNNQFGSLSL
Arabidopsis Description
FIGL1ATPase family AAA domain-containing protein FIGL1 [Source:UniProtKB/Swiss-Prot;Acc:F4JEX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.